Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02109

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
2,257,279	-		CCNA_02108	0.34	-0.3
2,257,416	+		CCNA_02108	0.43	+1.2
2,257,424	-		CCNA_02108	0.44	+1.9
2,257,429	-		CCNA_02108	0.44	+0.4
2,257,432	-		CCNA_02108	0.45	+0.1
2,257,528	+		CCNA_02108	0.51	-0.1
2,257,528	+		CCNA_02108	0.51	-0.2
2,257,536	-		CCNA_02108	0.52	-0.2
2,257,575	-		CCNA_02108	0.55	+0.8
2,257,578	+		CCNA_02108	0.55	+0.4
2,257,590	-		CCNA_02108	0.56	+0.2
2,257,609	-		CCNA_02108	0.57	-0.2
2,257,609	-		CCNA_02108	0.57	-0.0
2,257,630	+		CCNA_02108	0.59	+0.0
2,257,638	-		CCNA_02108	0.59	-0.6
2,257,638	-		CCNA_02108	0.59	+0.0
2,257,663	+		CCNA_02108	0.61	-0.3
2,257,671	-		CCNA_02108	0.62	-1.4
2,257,671	-		CCNA_02108	0.62	+0.1
2,257,733	+		CCNA_02108	0.66	+0.6
2,257,740	-		CCNA_02108	0.67	-0.4
2,257,758	-		CCNA_02108	0.68	+1.2
2,257,758	-		CCNA_02108	0.68	-0.5
2,257,758	-		CCNA_02108	0.68	+0.2
2,257,795	-		CCNA_02108	0.71	+1.1
2,257,839	-		CCNA_02108	0.74	-0.6
2,257,839	-		CCNA_02108	0.74	+0.7
2,258,048	-		CCNA_02108	0.89	-0.2
2,258,069	-				-0.5
2,258,087	+				+0.7
2,258,087	+				-0.6
2,258,107	+				-0.0
2,258,115	-				-0.8
2,258,122	+				+0.7
2,258,153	-				-0.8
2,258,188	-				+0.2
2,258,205	+				+0.3
2,258,245	-				+0.4
2,258,252	+				+0.1
2,258,278	-				+0.2
2,258,309	-				+0.7
2,258,316	-				-0.7
2,258,326	-				-0.1
2,258,328	+				-0.7
2,258,328	+				-1.0
2,258,336	-				-0.5
2,258,336	-				+0.3
2,258,336	-				+0.4
2,258,360	+				+0.6
2,258,360	-				+0.3
2,258,385	+				-0.0
2,258,385	+				+0.3
2,258,385	+				-0.3
2,258,387	+				+0.7
2,258,393	-				+1.9
2,258,404	+				-1.0
2,258,404	+				+0.8
2,258,419	+				-1.6
2,258,419	+				-2.0
2,258,427	-				-0.7
2,258,427	-				-0.9
2,258,431	+				+0.3
2,258,431	+				-1.9
2,258,431	+				+0.4
2,258,439	-		CCNA_02109	0.10	-1.1
2,258,439	-		CCNA_02109	0.10	-0.3
2,258,508	-		CCNA_02109	0.14	-0.0
2,258,517	-		CCNA_02109	0.15	-1.3
2,258,647	-		CCNA_02109	0.22	-0.4
2,258,657	+		CCNA_02109	0.22	-1.0
2,258,662	+		CCNA_02109	0.22	-1.4
2,258,670	-		CCNA_02109	0.23	-0.3
2,258,670	-		CCNA_02109	0.23	+0.3
2,258,727	+		CCNA_02109	0.26	+0.4
2,258,735	-		CCNA_02109	0.26	-0.5
2,258,737	+		CCNA_02109	0.26	-0.4
2,258,767	+		CCNA_02109	0.28	-1.1
2,258,767	-		CCNA_02109	0.28	-1.3
2,258,772	+		CCNA_02109	0.28	-1.0
2,258,849	-		CCNA_02109	0.33	-1.5
2,258,884	+		CCNA_02109	0.34	+0.4
2,258,982	+		CCNA_02109	0.40	+0.7
2,258,987	+		CCNA_02109	0.40	-0.2
2,259,082	-		CCNA_02109	0.45	-0.2
2,259,138	+		CCNA_02109	0.48	+0.2
2,259,174	-		CCNA_02109	0.50	-1.1
2,259,209	+		CCNA_02109	0.52	-0.7
2,259,235	+		CCNA_02109	0.54	-0.6
2,259,243	-		CCNA_02109	0.54	+0.1
2,259,279	-		CCNA_02109	0.56	+0.8
2,259,315	+		CCNA_02109	0.58	-1.3
2,259,342	+		CCNA_02109	0.59	-1.2
2,259,350	-		CCNA_02109	0.60	-0.1
2,259,373	+		CCNA_02109	0.61	-1.6
2,259,381	-		CCNA_02109	0.62	+1.4
2,259,609	+		CCNA_02109	0.74	-0.3
2,259,666	-		CCNA_02109	0.77	-0.6
2,259,798	-		CCNA_02109	0.84	-0.7
2,259,899	-		CCNA_02109	0.90	+0.1
2,259,917	+				-0.7
2,260,041	+				-0.6
2,260,099	+				-1.7
2,260,106	+				-1.0
2,260,106	+				-2.2
2,260,117	+				-2.2
2,260,117	+				-0.7
2,260,180	+				+1.1
2,260,203	-				-0.1
2,260,217	-				-0.4
2,260,227	+				-1.7
2,260,231	+				-0.6
2,260,235	-				+0.0
2,260,295	+				-0.6
2,260,295	+				-1.8
2,260,303	-				+1.1
2,260,303	-				+0.3
2,260,303	-				+0.5
2,260,333	-				-0.2
2,260,356	+				+0.4
2,260,381	-		CCNA_02110	0.14	-1.1
2,260,389	+		CCNA_02110	0.16	+0.1
2,260,424	+		CCNA_02110	0.24	+0.1
2,260,434	+		CCNA_02110	0.27	-0.0
2,260,439	+		CCNA_02110	0.28	-1.7
2,260,442	-		CCNA_02110	0.28	+0.4
2,260,460	-		CCNA_02110	0.33	-0.1
2,260,517	-		CCNA_02110	0.46	-0.7
2,260,527	+		CCNA_02110	0.48	-0.4
2,260,552	+		CCNA_02110	0.54	-1.4
2,260,651	-		CCNA_02110	0.77	-0.1
2,260,651	-		CCNA_02110	0.77	-1.1
2,260,651	-		CCNA_02110	0.77	+0.1
2,260,706	-				-1.7
2,260,741	-				+1.8
2,260,748	+				-0.9
2,260,756	-				-0.4
2,260,788	+				-2.9
2,260,796	-				-1.0
2,260,828	-		CCNA_02111	0.12	-0.6
2,260,928	+		CCNA_02111	0.30	-1.1
2,260,928	+		CCNA_02111	0.30	-1.1
2,260,931	-		CCNA_02111	0.31	+0.2
2,260,936	-		CCNA_02111	0.32	+0.7