Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01910

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
2,054,348	-		CCNA_01909	0.34	-1.5
2,054,349	+		CCNA_01909	0.34	+0.1
2,054,354	-		CCNA_01909	0.34	-0.1
2,054,356	+		CCNA_01909	0.34	-0.9
2,054,364	-		CCNA_01909	0.35	+0.2
2,054,374	-		CCNA_01909	0.36	+1.2
2,054,375	-		CCNA_01909	0.36	-1.3
2,054,382	-		CCNA_01909	0.37	+0.4
2,054,389	+		CCNA_01909	0.37	-0.2
2,054,389	+		CCNA_01909	0.37	-2.3
2,054,397	-		CCNA_01909	0.38	-0.1
2,054,397	-		CCNA_01909	0.38	+1.3
2,054,407	-		CCNA_01909	0.39	-0.9
2,054,437	-		CCNA_01909	0.42	-1.2
2,054,437	-		CCNA_01909	0.42	-0.9
2,054,456	-		CCNA_01909	0.43	+0.9
2,054,464	+		CCNA_01909	0.44	-0.0
2,054,496	+		CCNA_01909	0.47	-2.0
2,054,501	+		CCNA_01909	0.47	-1.0
2,054,501	+		CCNA_01909	0.47	-0.6
2,054,509	-		CCNA_01909	0.48	-0.4
2,054,509	-		CCNA_01909	0.48	-0.1
2,054,509	-		CCNA_01909	0.48	-0.7
2,054,544	+		CCNA_01909	0.51	+0.9
2,054,551	-		CCNA_01909	0.52	-1.0
2,054,569	+		CCNA_01909	0.53	-0.3
2,054,617	-		CCNA_01909	0.58	-0.2
2,054,662	+		CCNA_01909	0.62	+0.5
2,054,665	-		CCNA_01909	0.62	-1.6
2,054,683	-		CCNA_01909	0.64	-1.1
2,054,725	-		CCNA_01909	0.67	-0.2
2,054,727	+		CCNA_01909	0.68	-2.0
2,054,732	+		CCNA_01909	0.68	-0.9
2,054,755	+		CCNA_01909	0.70	-1.4
2,054,757	+		CCNA_01909	0.70	-1.3
2,054,771	+		CCNA_01909	0.72	+1.0
2,054,787	+		CCNA_01909	0.73	-0.3
2,054,787	+		CCNA_01909	0.73	+0.0
2,054,787	-		CCNA_01909	0.73	+0.6
2,054,810	-		CCNA_01909	0.75	-0.1
2,054,840	-		CCNA_01909	0.78	+0.5
2,054,848	+		CCNA_01909	0.79	-0.7
2,054,877	-		CCNA_01909	0.81	-0.8
2,054,899	+		CCNA_01909	0.83	+1.1
2,054,902	+		CCNA_01909	0.83	-0.1
2,054,909	+		CCNA_01909	0.84	-0.5
2,054,909	+		CCNA_01909	0.84	-3.2
2,054,910	-		CCNA_01909	0.84	-1.8
2,054,917	-		CCNA_01909	0.85	-0.4
2,054,917	-		CCNA_01909	0.85	+0.1
2,055,004	+				+0.9
2,055,004	+				+0.7
2,055,023	-				+1.3
2,055,023	-				+0.5
2,055,039	-				-0.2
2,055,044	-				+0.6
2,055,073	+				-0.4
2,055,218	-				+0.0
2,055,220	-				-2.5
2,055,240	+				+0.6
2,055,248	+				-1.3
2,055,248	-				-2.0
2,055,293	+				-3.1
2,055,318	-				+0.6
2,055,329	+		CCNA_01910	0.18	+0.1
2,055,331	+		CCNA_01910	0.20	-0.6
2,055,339	+		CCNA_01910	0.27	-1.6
2,055,339	+		CCNA_01910	0.27	-1.4
2,055,339	+		CCNA_01910	0.27	-0.7
2,055,339	+		CCNA_01910	0.27	+0.9
2,055,339	+		CCNA_01910	0.27	-1.6
2,055,339	+		CCNA_01910	0.27	-0.2
2,055,342	-		CCNA_01910	0.29	+1.1
2,055,347	-		CCNA_01910	0.33	+0.3
2,055,347	-		CCNA_01910	0.33	-1.4
2,055,348	+		CCNA_01910	0.34	-1.7
2,055,362	+		CCNA_01910	0.46	+0.6
2,055,370	-		CCNA_01910	0.53	+0.3
2,055,370	-		CCNA_01910	0.53	-1.0
2,055,370	-		CCNA_01910	0.53	+0.7
2,055,370	-		CCNA_01910	0.53	-0.9
2,055,370	-		CCNA_01910	0.53	-1.0
2,055,370	-		CCNA_01910	0.53	-0.6
2,055,410	-		CCNA_01910	0.86	+0.6
2,055,410	-		CCNA_01910	0.86	-0.1
2,055,413	+		CCNA_01910	0.88	-1.5
2,055,413	+		CCNA_01910	0.88	+1.9
2,055,437	+				+0.6
2,055,440	-				-0.2
2,055,442	+				-1.8
2,055,447	-				-0.0
2,055,450	-				-0.5
2,055,473	+				-2.2
2,055,494	+				-0.2
2,055,494	+				-0.1
2,055,494	+				-2.2
2,055,495	-				+0.5
2,055,515	-				+0.3
2,055,545	-				-0.6
2,055,545	-				-0.9
2,055,554	+				+0.9
2,055,582	+				-1.2
2,055,582	+				-1.6
2,055,590	-				+0.2
2,055,590	-				+1.1
2,055,604	+		CCNA_01911	0.11	+1.1
2,055,633	+		CCNA_01911	0.19	-0.5
2,055,640	-		CCNA_01911	0.21	-0.1
2,055,665	-		CCNA_01911	0.28	+0.3
2,055,734	+		CCNA_01911	0.46	-0.7
2,055,742	-		CCNA_01911	0.48	-1.4
2,055,744	+		CCNA_01911	0.49	-2.3
2,055,752	+		CCNA_01911	0.51	+0.1
2,055,758	+		CCNA_01911	0.53	+0.6
2,055,766	-		CCNA_01911	0.55	-0.0
2,055,780	+		CCNA_01911	0.59	-0.8
2,055,785	+		CCNA_01911	0.60	-2.5
2,055,785	+		CCNA_01911	0.60	+0.1
2,055,786	-		CCNA_01911	0.60	-0.6
2,055,825	+		CCNA_01911	0.71	-0.4
2,055,832	-		CCNA_01911	0.73	+0.8
2,055,849	-		CCNA_01911	0.77	-1.4
2,055,936	+				-0.2
2,055,949	-				-0.1
2,055,969	-				-0.1
2,056,000	-				+0.0
2,056,003	+				-0.0
2,056,005	+				-1.5
2,056,011	-				-1.9
2,056,036	-				-0.6
2,056,040	+				+0.2
2,056,055	+				+1.6
2,056,103	+				+0.2
2,056,106	+				-1.4
2,056,109	-				-1.5
2,056,109	-				+0.5
2,056,119	-				+1.6
2,056,126	+				-1.2
2,056,131	+				-0.7
2,056,143	+				+0.6
2,056,162	+		CCNA_01912	0.10	+1.9
2,056,200	+		CCNA_01912	0.22	-0.5
2,056,255	+		CCNA_01912	0.39	+0.7
2,056,264	-		CCNA_01912	0.42	+0.4
2,056,309	+		CCNA_01912	0.56	+0.1
2,056,336	-		CCNA_01912	0.64	+0.0
2,056,341	+		CCNA_01912	0.66	-1.8
2,056,384	-		CCNA_01912	0.79	+1.9
2,056,390	+		CCNA_01912	0.81	-1.1
2,056,390	+		CCNA_01912	0.81	-0.4
2,056,425	+				-1.8