Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01676
Experiment: PYE with Dimethyl Sulfoxide 0.4 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with Dimethyl Sulfoxide 0.4 % |
---|---|---|---|---|---|
remove | |||||
1,799,096 | + | CCNA_01675 | 0.76 | -0.7 | |
1,799,096 | + | CCNA_01675 | 0.76 | +0.5 | |
1,799,530 | + | -0.3 | |||
1,799,535 | + | +1.0 | |||
1,799,535 | + | -0.7 | |||
1,799,535 | + | -0.8 | |||
1,799,535 | + | -0.6 | |||
1,799,535 | + | -0.1 | |||
1,799,538 | - | +0.9 | |||
1,799,538 | - | -2.5 | |||
1,799,622 | + | +0.3 | |||
1,799,632 | + | +1.1 | |||
1,799,640 | - | -1.4 | |||
1,799,985 | - | +0.9 | |||
1,801,147 | + | CCNA_01676 | 0.38 | -0.1 | |
1,801,345 | + | CCNA_01676 | 0.43 | +0.3 | |
1,801,666 | + | CCNA_01676 | 0.50 | +0.1 | |
1,801,815 | + | CCNA_01676 | 0.54 | +0.3 | |
1,802,122 | + | CCNA_01676 | 0.61 | -0.3 | |
1,802,483 | + | CCNA_01676 | 0.70 | -0.1 | |
1,803,000 | + | CCNA_01676 | 0.83 | +0.9 | |
1,803,781 | + | +0.5 | |||
1,803,824 | + | -0.7 | |||
1,804,198 | - | CCNA_01677 | 0.31 | +0.6 | |
1,804,248 | + | CCNA_01677 | 0.35 | +3.2 | |
1,804,330 | + | CCNA_01677 | 0.41 | +2.5 | |
1,804,333 | - | CCNA_01677 | 0.42 | -0.8 | |
1,804,339 | - | CCNA_01677 | 0.42 | +0.6 | |
1,804,567 | - | CCNA_01677 | 0.60 | +0.9 | |
1,804,666 | + | CCNA_01677 | 0.68 | +0.2 | |
1,804,674 | - | CCNA_01677 | 0.69 | +0.3 |
Or see this region's nucleotide sequence