Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01524

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,631,287	+		CCNA_01522	0.84	-0.6
1,631,300	-		CCNA_01522	0.85	-0.3
1,631,323	+		CCNA_01522	0.88	-0.1
1,631,331	-		CCNA_01522	0.89	+0.9
1,631,371	+				+0.6
1,631,379	-				+0.1
1,631,421	+				-0.2
1,631,460	-				+0.7
1,631,513	-				+0.5
1,631,513	-				+0.2
1,631,520	-				+0.1
1,631,566	+				-0.7
1,631,566	+				+0.5
1,631,566	+				-2.5
1,631,566	+				-1.1
1,631,566	+				-0.4
1,631,566	+				+0.7
1,631,574	-				+1.2
1,631,574	-				-1.4
1,631,574	-				-1.2
1,631,586	-				-0.1
1,631,586	-				-0.1
1,631,622	-		CCNA_01523	0.15	-0.7
1,631,633	+		CCNA_01523	0.17	-2.4
1,631,633	+		CCNA_01523	0.17	+0.1
1,631,641	-		CCNA_01523	0.18	+0.2
1,631,641	-		CCNA_01523	0.18	-3.6
1,631,648	+		CCNA_01523	0.19	-0.5
1,631,664	-		CCNA_01523	0.22	+0.2
1,631,693	-		CCNA_01523	0.27	-1.9
1,631,706	+		CCNA_01523	0.29	-1.0
1,631,714	+		CCNA_01523	0.31	-1.2
1,631,714	-		CCNA_01523	0.31	-1.2
1,631,763	-		CCNA_01523	0.39	-0.4
1,631,769	+		CCNA_01523	0.40	-0.5
1,631,777	-		CCNA_01523	0.42	-1.5
1,631,821	-		CCNA_01523	0.49	-0.3
1,631,843	+		CCNA_01523	0.53	-0.7
1,631,843	+		CCNA_01523	0.53	-0.3
1,631,843	+		CCNA_01523	0.53	-0.3
1,631,843	+		CCNA_01523	0.53	-0.6
1,631,843	+		CCNA_01523	0.53	+0.6
1,631,843	+		CCNA_01523	0.53	-0.2
1,631,843	+		CCNA_01523	0.53	-0.9
1,631,843	+		CCNA_01523	0.53	-1.0
1,631,843	+		CCNA_01523	0.53	-1.3
1,631,851	-		CCNA_01523	0.54	+0.2
1,631,851	-		CCNA_01523	0.54	-0.1
1,631,851	-		CCNA_01523	0.54	-1.2
1,631,851	-		CCNA_01523	0.54	-0.8
1,631,851	-		CCNA_01523	0.54	-0.4
1,631,904	-		CCNA_01523	0.63	-0.0
1,631,905	+		CCNA_01523	0.64	+0.1
1,631,918	-		CCNA_01523	0.66	-0.5
1,631,939	+		CCNA_01523	0.69	-1.3
1,631,953	+		CCNA_01523	0.72	+0.2
1,631,965	-		CCNA_01523	0.74	-0.4
1,632,007	-		CCNA_01523	0.81	-0.5
1,632,032	-		CCNA_01523	0.85	-0.8
1,632,035	-		CCNA_01523	0.86	+0.8
1,632,035	-		CCNA_01523	0.86	+0.2
1,632,068	-				+0.1
1,632,070	-				+0.9
1,632,091	+				-0.6
1,632,103	+				+1.3
1,632,109	-				+0.7
1,632,206	+				+0.1
1,632,207	+				-1.1
1,632,208	-				+0.2
1,632,247	+				+0.0
1,632,247	+				-0.5
1,632,247	+				-0.2
1,632,255	-				+1.1
1,632,255	-				-0.2
1,632,255	-				-0.3
1,632,261	+				+0.2
1,632,261	+				+0.1
1,632,261	+				+1.3
1,632,264	-				+0.5
1,632,335	+				-0.6
1,632,343	-				+0.3
1,632,343	-				-0.2
1,632,343	-				+0.3
1,632,348	-				+0.8
1,632,388	-				-0.1
1,632,390	-				-0.1
1,632,416	+				+0.2
1,632,424	-				-0.0
1,632,470	+		CCNA_01524	0.11	-0.4
1,632,493	+		CCNA_01524	0.12	+0.7
1,632,493	+		CCNA_01524	0.12	-0.1
1,632,493	+		CCNA_01524	0.12	-1.8
1,632,501	-		CCNA_01524	0.13	+1.6
1,632,508	-		CCNA_01524	0.13	-0.7
1,632,535	+		CCNA_01524	0.14	+1.4
1,632,571	+		CCNA_01524	0.16	+0.4
1,632,576	+		CCNA_01524	0.17	+0.6
1,632,639	+		CCNA_01524	0.20	-0.3
1,632,639	+		CCNA_01524	0.20	-1.8
1,632,639	+		CCNA_01524	0.20	-1.0
1,632,642	-		CCNA_01524	0.20	+0.3
1,632,647	-		CCNA_01524	0.21	+1.0
1,632,647	-		CCNA_01524	0.21	+0.2
1,632,649	+		CCNA_01524	0.21	-0.3
1,632,716	-		CCNA_01524	0.25	+0.0
1,632,719	+		CCNA_01524	0.25	-2.2
1,632,719	+		CCNA_01524	0.25	+0.0
1,632,727	-		CCNA_01524	0.25	+1.4
1,632,741	+		CCNA_01524	0.26	-1.7
1,632,746	+		CCNA_01524	0.26	-0.6
1,632,749	-		CCNA_01524	0.26	+0.5
1,632,754	-		CCNA_01524	0.27	-0.5
1,632,797	+		CCNA_01524	0.29	-0.8
1,632,828	+		CCNA_01524	0.31	-0.2
1,632,833	+		CCNA_01524	0.31	-1.0
1,632,922	-		CCNA_01524	0.36	-0.3
1,632,941	+		CCNA_01524	0.37	+0.0
1,632,941	+		CCNA_01524	0.37	-1.4
1,632,949	-		CCNA_01524	0.38	-0.5
1,632,949	-		CCNA_01524	0.38	+0.4
1,632,958	+		CCNA_01524	0.38	+0.2
1,632,968	-		CCNA_01524	0.39	-0.0
1,633,036	+		CCNA_01524	0.42	-2.5
1,633,036	+		CCNA_01524	0.42	+0.1
1,633,044	-		CCNA_01524	0.43	+0.0
1,633,064	+		CCNA_01524	0.44	-0.4
1,633,098	+		CCNA_01524	0.46	-0.4
1,633,098	+		CCNA_01524	0.46	+0.3
1,633,106	-		CCNA_01524	0.46	+0.3
1,633,124	+		CCNA_01524	0.47	-0.1
1,633,124	+		CCNA_01524	0.47	-0.8
1,633,124	+		CCNA_01524	0.47	-0.0
1,633,132	+		CCNA_01524	0.48	+0.0
1,633,132	+		CCNA_01524	0.48	-0.6
1,633,132	+		CCNA_01524	0.48	-1.6
1,633,132	+		CCNA_01524	0.48	-1.2
1,633,132	+		CCNA_01524	0.48	+0.6
1,633,132	+		CCNA_01524	0.48	-1.4
1,633,132	+		CCNA_01524	0.48	+0.7
1,633,132	-		CCNA_01524	0.48	-0.2
1,633,137	+		CCNA_01524	0.48	-1.0
1,633,140	-		CCNA_01524	0.48	-0.3
1,633,140	-		CCNA_01524	0.48	+0.4
1,633,140	-		CCNA_01524	0.48	-0.2
1,633,140	-		CCNA_01524	0.48	+1.0
1,633,140	-		CCNA_01524	0.48	+0.4
1,633,140	-		CCNA_01524	0.48	+0.4
1,633,140	-		CCNA_01524	0.48	+0.8
1,633,142	+		CCNA_01524	0.48	+0.2
1,633,180	+		CCNA_01524	0.50	+0.3
1,633,188	-		CCNA_01524	0.51	+0.3
1,633,198	-		CCNA_01524	0.51	-0.4
1,633,204	+		CCNA_01524	0.52	+0.1
1,633,212	-		CCNA_01524	0.52	+1.6
1,633,212	-		CCNA_01524	0.52	-0.0
1,633,234	+		CCNA_01524	0.53	-0.8
1,633,234	+		CCNA_01524	0.53	-1.9
1,633,242	-		CCNA_01524	0.54	-0.3
1,633,267	+		CCNA_01524	0.55	-0.8
1,633,293	+		CCNA_01524	0.57	+0.1
1,633,293	+		CCNA_01524	0.57	-0.8
1,633,298	+		CCNA_01524	0.57	+0.6
1,633,303	+		CCNA_01524	0.57	-1.1
1,633,311	-		CCNA_01524	0.58	-0.1
1,633,350	+		CCNA_01524	0.60	-0.9
1,633,358	-		CCNA_01524	0.60	+0.6
1,633,375	+		CCNA_01524	0.61	-0.6
1,633,383	-		CCNA_01524	0.62	+0.6
1,633,423	+		CCNA_01524	0.64	-0.3
1,633,456	+		CCNA_01524	0.66	-0.1
1,633,461	+		CCNA_01524	0.66	-0.3
1,633,461	+		CCNA_01524	0.66	+0.9
1,633,463	+		CCNA_01524	0.66	+0.1
1,633,469	-		CCNA_01524	0.67	-0.0
1,633,469	-		CCNA_01524	0.67	+1.3
1,633,481	-		CCNA_01524	0.67	-0.9
1,633,485	+		CCNA_01524	0.67	+0.5
1,633,486	-		CCNA_01524	0.68	+1.7
1,633,486	-		CCNA_01524	0.68	+0.7
1,633,486	-		CCNA_01524	0.68	+0.6
1,633,493	+		CCNA_01524	0.68	-0.8
1,633,501	-		CCNA_01524	0.68	-0.4
1,633,517	+		CCNA_01524	0.69	-0.4
1,633,517	+		CCNA_01524	0.69	-1.5
1,633,517	+		CCNA_01524	0.69	-0.0
1,633,517	+		CCNA_01524	0.69	+0.1
1,633,517	+		CCNA_01524	0.69	-0.7
1,633,517	+		CCNA_01524	0.69	+0.6
1,633,565	+		CCNA_01524	0.72	-0.4
1,633,579	+		CCNA_01524	0.73	-0.6
1,633,608	-		CCNA_01524	0.74	+0.3
1,633,610	+		CCNA_01524	0.74	+0.0
1,633,610	+		CCNA_01524	0.74	+0.3
1,633,719	+		CCNA_01524	0.81	+1.8
1,633,730	+		CCNA_01524	0.81	+0.3
1,633,783	+		CCNA_01524	0.84	-0.7
1,633,783	+		CCNA_01524	0.84	-0.2
1,633,789	+		CCNA_01524	0.84	+0.6
1,633,789	+		CCNA_01524	0.84	+0.3
1,633,791	-		CCNA_01524	0.85	-0.5
1,633,797	-		CCNA_01524	0.85	+1.2
1,633,797	-		CCNA_01524	0.85	+0.5
1,633,808	+		CCNA_01524	0.85	-0.8
1,633,827	+		CCNA_01524	0.87	+0.5
1,633,847	+		CCNA_01524	0.88	+0.5
1,633,852	+		CCNA_01524	0.88	-0.8
1,633,855	-		CCNA_01524	0.88	+0.2
1,633,855	-		CCNA_01524	0.88	-0.2
1,633,915	+				-0.1
1,633,915	+				-0.9
1,633,915	+				-0.2
1,633,923	-				-0.1
1,633,939	+				-0.5
1,633,939	+				+1.1
1,633,993	-				-1.0
1,634,012	+				+0.9
1,634,012	+				-0.2
1,634,012	+				-0.8
1,634,025	-				-1.9
1,634,026	-				-0.1
1,634,026	-				+0.4
1,634,049	-				+0.0
1,634,070	-				+1.2
1,634,072	-				-1.7
1,634,075	+				-0.3
1,634,083	-				-0.1
1,634,083	-				-1.0
1,634,083	-				-1.1
1,634,112	+				+0.4
1,634,112	+				-0.3
1,634,114	+				+0.7
1,634,124	+				+0.5
1,634,124	+				+0.5
1,634,124	+				+0.4
1,634,124	+				+0.1
1,634,124	+				+1.3
1,634,124	+				-0.2
1,634,124	+				+0.4
1,634,132	-				+1.4
1,634,132	-				+0.9
1,634,132	-				-2.6
1,634,132	-				-1.9
1,634,144	+				-0.4
1,634,234	-				-1.9
1,634,254	-				-0.2
1,634,320	+		CCNA_01525	0.13	-1.3
1,634,328	+		CCNA_01525	0.15	+0.7
1,634,347	+		CCNA_01525	0.19	+0.0
1,634,347	+		CCNA_01525	0.19	+0.6
1,634,356	+		CCNA_01525	0.21	+0.0
1,634,542	-		CCNA_01525	0.65	-0.7
1,634,545	+		CCNA_01525	0.65	+0.9
1,634,592	+		CCNA_01525	0.77	-1.1
1,634,599	+		CCNA_01525	0.78	+0.6
1,634,642	+		CCNA_01525	0.88	+1.0
1,634,690	+				+0.5
1,634,719	+		CCNA_01526	0.19	+0.7
1,634,758	+		CCNA_01526	0.29	+0.6
1,634,793	-		CCNA_01526	0.39	+1.3
1,634,806	-		CCNA_01526	0.43	-0.5
1,634,812	+		CCNA_01526	0.44	+0.7
1,634,820	-		CCNA_01526	0.47	-1.6
1,634,820	-		CCNA_01526	0.47	-1.5
1,634,820	-		CCNA_01526	0.47	-1.6
1,634,857	+		CCNA_01526	0.57	+0.8
1,634,895	+		CCNA_01526	0.67	+0.8
1,634,896	+		CCNA_01526	0.67	+0.5
1,634,903	-		CCNA_01526	0.69	-0.3
1,634,914	+		CCNA_01526	0.72	+0.6
1,634,914	+		CCNA_01526	0.72	+0.5
1,634,943	+		CCNA_01526	0.80	+0.6
1,635,031	+				+0.6
1,635,032	+				+0.3
1,635,032	+				+0.5
1,635,033	+				-0.1
1,635,039	-				-0.3