Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01496

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,605,089	+		CCNA_01495	0.35	-0.2
1,605,106	+		CCNA_01495	0.37	+0.0
1,605,106	+		CCNA_01495	0.37	-0.4
1,605,106	+		CCNA_01495	0.37	-2.1
1,605,106	+		CCNA_01495	0.37	-0.2
1,605,106	+		CCNA_01495	0.37	-0.6
1,605,114	-		CCNA_01495	0.37	-0.9
1,605,129	-		CCNA_01495	0.38	-1.1
1,605,202	-		CCNA_01495	0.43	+0.5
1,605,227	+		CCNA_01495	0.45	+0.2
1,605,232	+		CCNA_01495	0.45	+0.1
1,605,232	+		CCNA_01495	0.45	-0.6
1,605,237	+		CCNA_01495	0.46	-0.6
1,605,237	+		CCNA_01495	0.46	-0.1
1,605,237	+		CCNA_01495	0.46	+1.0
1,605,237	+		CCNA_01495	0.46	-0.5
1,605,240	-		CCNA_01495	0.46	-0.1
1,605,317	+		CCNA_01495	0.51	-1.7
1,605,320	-		CCNA_01495	0.51	-1.3
1,605,323	+		CCNA_01495	0.52	-0.3
1,605,325	-		CCNA_01495	0.52	-0.2
1,605,390	+		CCNA_01495	0.56	+0.0
1,605,391	+		CCNA_01495	0.56	-1.0
1,605,399	+		CCNA_01495	0.57	+0.1
1,605,399	+		CCNA_01495	0.57	-0.4
1,605,404	+		CCNA_01495	0.57	-1.6
1,605,408	+		CCNA_01495	0.57	+0.0
1,605,429	+		CCNA_01495	0.59	-0.9
1,605,444	+		CCNA_01495	0.60	-1.4
1,605,526	+		CCNA_01495	0.65	+0.6
1,605,545	-		CCNA_01495	0.67	-0.7
1,605,562	-		CCNA_01495	0.68	+0.4
1,605,582	-		CCNA_01495	0.69	+0.3
1,605,584	+		CCNA_01495	0.69	-0.5
1,605,584	+		CCNA_01495	0.69	+0.2
1,605,584	+		CCNA_01495	0.69	-0.0
1,605,584	+		CCNA_01495	0.69	+0.6
1,605,592	-		CCNA_01495	0.70	+0.6
1,605,592	-		CCNA_01495	0.70	-0.3
1,605,592	-		CCNA_01495	0.70	+0.4
1,605,650	+		CCNA_01495	0.74	-0.9
1,605,650	+		CCNA_01495	0.74	+1.6
1,605,658	-		CCNA_01495	0.75	-0.1
1,605,658	-		CCNA_01495	0.75	-1.0
1,605,658	-		CCNA_01495	0.75	+0.1
1,605,658	-		CCNA_01495	0.75	-1.1
1,605,692	+		CCNA_01495	0.77	+0.4
1,605,697	+		CCNA_01495	0.77	-0.9
1,605,697	+		CCNA_01495	0.77	-0.7
1,605,705	-		CCNA_01495	0.78	-0.5
1,605,720	-		CCNA_01495	0.79	-0.1
1,605,738	+		CCNA_01495	0.80	-1.5
1,605,769	-		CCNA_01495	0.82	+0.3
1,605,792	+		CCNA_01495	0.84	-0.8
1,605,814	+		CCNA_01495	0.85	+1.1
1,605,825	+		CCNA_01495	0.86	+0.1
1,605,843	-		CCNA_01495	0.87	-1.9
1,605,925	+				+0.3
1,605,925	+				-0.1
1,605,928	-				-0.7
1,605,928	-				+0.2
1,605,933	-				+0.3
1,605,945	-				-0.5
1,605,949	+				-1.8
1,605,949	+				+0.1
1,605,957	-				-1.4
1,605,957	-				+0.6
1,606,007	+				-0.1
1,606,026	-				-1.4
1,606,026	-				+0.1
1,606,042	-				-2.9
1,606,046	+				+2.1
1,606,046	+				-1.4
1,606,046	+				-0.1
1,606,046	+				+0.6
1,606,054	-				+0.3
1,606,054	-				-0.6
1,606,054	-				-0.7
1,606,054	-				-1.3
1,606,054	-				-2.6
1,606,054	-				-0.1
1,606,054	-				+0.1
1,606,054	-				-1.4
1,606,054	-				+0.1
1,606,072	-				-0.6
1,606,084	-				-0.2
1,606,096	+				-0.3
1,606,096	+				+0.3
1,606,096	+				+0.6
1,606,104	-				-0.3
1,606,104	-				-0.9
1,606,208	-		CCNA_01496	0.14	-0.9
1,606,282	-		CCNA_01496	0.22	-0.8
1,606,288	-		CCNA_01496	0.23	+0.3
1,606,876	-				+0.1
1,606,936	+				-0.3
1,606,936	+				-0.6
1,606,936	+				-0.0
1,606,936	+				+2.2
1,606,977	-				-2.1
1,606,977	-				-1.8
1,606,985	+				+1.3
1,607,032	-				-0.1
1,607,040	+				-1.9
1,607,134	-		CCNA_01497	0.18	+0.6
1,607,182	+		CCNA_01497	0.23	-0.3
1,607,197	+		CCNA_01497	0.24	+0.3
1,607,228	+		CCNA_01497	0.27	+2.1
1,607,238	+		CCNA_01497	0.28	+0.3
1,607,238	+		CCNA_01497	0.28	+1.8
1,607,238	+		CCNA_01497	0.28	+0.0
1,607,246	-		CCNA_01497	0.29	-0.8
1,607,246	-		CCNA_01497	0.29	+0.9
1,607,295	-		CCNA_01497	0.34	-0.7
1,607,298	+		CCNA_01497	0.34	+0.3
1,607,307	-		CCNA_01497	0.35	-0.4
1,607,406	+		CCNA_01497	0.45	+0.1
1,607,406	+		CCNA_01497	0.45	+1.1
1,607,406	+		CCNA_01497	0.45	+1.9
1,607,414	-		CCNA_01497	0.46	-1.2
1,607,424	+		CCNA_01497	0.47	+1.1
1,607,424	+		CCNA_01497	0.47	+1.3
1,607,432	-		CCNA_01497	0.48	-0.4
1,607,432	-		CCNA_01497	0.48	+0.3
1,607,542	+		CCNA_01497	0.59	-0.7
1,607,542	+		CCNA_01497	0.59	+0.1
1,607,542	+		CCNA_01497	0.59	-0.4
1,607,550	-		CCNA_01497	0.59	-0.1
1,607,550	-		CCNA_01497	0.59	-0.3
1,607,555	-		CCNA_01497	0.60	+0.6
1,607,690	-		CCNA_01497	0.73	-0.3
1,607,714	+		CCNA_01497	0.76	+0.5
1,607,783	+		CCNA_01497	0.83	+0.7
1,607,789	+		CCNA_01497	0.83	+0.1
1,607,866	+				-0.4
1,607,923	-				+0.4