Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01472

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,578,635	+		CCNA_01471	0.33	-0.5
1,578,635	+		CCNA_01471	0.33	-0.8
1,578,643	-		CCNA_01471	0.33	+1.0
1,578,681	-		CCNA_01471	0.36	-1.9
1,578,682	-		CCNA_01471	0.36	+0.3
1,578,682	-		CCNA_01471	0.36	-1.9
1,578,713	+		CCNA_01471	0.38	-0.4
1,578,743	+		CCNA_01471	0.40	-2.3
1,578,751	-		CCNA_01471	0.41	-0.2
1,578,751	-		CCNA_01471	0.41	-0.2
1,578,751	-		CCNA_01471	0.41	-0.8
1,578,756	-		CCNA_01471	0.41	+0.8
1,578,758	+		CCNA_01471	0.41	-1.6
1,578,767	+		CCNA_01471	0.42	+0.4
1,578,767	+		CCNA_01471	0.42	+1.2
1,578,768	+		CCNA_01471	0.42	-1.5
1,578,813	-		CCNA_01471	0.45	-1.5
1,578,813	-		CCNA_01471	0.45	-3.0
1,578,850	+		CCNA_01471	0.47	-0.2
1,578,850	+		CCNA_01471	0.47	+0.4
1,578,850	+		CCNA_01471	0.47	+0.3
1,578,850	+		CCNA_01471	0.47	-2.0
1,578,858	+		CCNA_01471	0.48	-0.3
1,578,858	-		CCNA_01471	0.48	-0.7
1,578,875	-		CCNA_01471	0.49	+0.1
1,578,965	+		CCNA_01471	0.55	+0.4
1,578,973	-		CCNA_01471	0.55	-1.0
1,578,973	-		CCNA_01471	0.55	+0.2
1,578,980	-		CCNA_01471	0.56	-1.0
1,578,988	-		CCNA_01471	0.56	-1.6
1,579,018	+		CCNA_01471	0.58	-1.2
1,579,023	+		CCNA_01471	0.59	+1.5
1,579,023	+		CCNA_01471	0.59	-0.9
1,579,023	+		CCNA_01471	0.59	+0.3
1,579,031	-		CCNA_01471	0.59	-0.9
1,579,100	-		CCNA_01471	0.64	-0.8
1,579,131	-		CCNA_01471	0.66	-1.3
1,579,133	-		CCNA_01471	0.66	-0.9
1,579,176	-		CCNA_01471	0.69	-0.1
1,579,192	+		CCNA_01471	0.70	-0.1
1,579,192	+		CCNA_01471	0.70	+0.0
1,579,200	-		CCNA_01471	0.71	+0.2
1,579,200	-		CCNA_01471	0.71	+0.3
1,579,215	+		CCNA_01471	0.72	+0.8
1,579,219	+		CCNA_01471	0.72	-1.3
1,579,223	-		CCNA_01471	0.72	-0.2
1,579,225	-		CCNA_01471	0.72	-0.1
1,579,232	+		CCNA_01471	0.73	-0.4
1,579,232	-		CCNA_01471	0.73	-0.4
1,579,258	-		CCNA_01471	0.75	-0.1
1,579,356	+		CCNA_01471	0.81	-0.3
1,579,362	+		CCNA_01471	0.82	-0.6
1,579,364	-		CCNA_01471	0.82	+0.1
1,579,376	+		CCNA_01471	0.82	-1.4
1,579,384	-		CCNA_01471	0.83	-0.7
1,579,398	+		CCNA_01471	0.84	-1.7
1,579,405	-		CCNA_01471	0.84	-0.3
1,579,443	+		CCNA_01471	0.87	-1.5
1,579,443	+		CCNA_01471	0.87	-0.6
1,579,477	-		CCNA_01471	0.89	+0.3
1,579,478	-		CCNA_01471	0.89	-0.2
1,579,535	+				-1.2
1,579,564	-				-1.5
1,579,584	+				-1.8
1,579,602	-				+0.3
1,579,602	-				-0.5
1,579,602	-				-2.2
1,579,602	-				+1.3
1,579,602	-				-0.4
1,579,602	-				-0.6
1,579,602	-				-1.0
1,579,602	-				-0.6
1,579,620	-				+0.2
1,579,668	-				+0.1
1,579,686	-		CCNA_01472	0.11	-1.3
1,579,686	-		CCNA_01472	0.11	-0.1
1,579,694	+		CCNA_01472	0.12	-1.2
1,579,702	-		CCNA_01472	0.14	-0.8
1,579,702	-		CCNA_01472	0.14	-0.3
1,579,767	-		CCNA_01472	0.27	+0.2
1,579,767	-		CCNA_01472	0.27	-0.8
1,579,821	-		CCNA_01472	0.38	-0.8
1,579,844	-		CCNA_01472	0.42	-0.7
1,579,873	-		CCNA_01472	0.48	-0.7
1,579,878	+		CCNA_01472	0.49	+0.1
1,579,903	-		CCNA_01472	0.54	-1.3
1,580,001	-		CCNA_01472	0.73	-0.7
1,580,014	-		CCNA_01472	0.76	-2.0
1,580,016	+		CCNA_01472	0.76	+0.7
1,580,058	+		CCNA_01472	0.85	+0.2
1,580,060	+		CCNA_01472	0.85	-0.1
1,580,060	+		CCNA_01472	0.85	-0.8
1,580,068	-		CCNA_01472	0.87	-1.2
1,580,068	-		CCNA_01472	0.87	-1.1
1,580,089	+				-0.1
1,580,166	-				+0.9
1,580,200	+				+1.0
1,580,292	+				+0.8
1,580,300	-				-0.3
1,580,300	-				-0.8
1,580,315	+				-0.5
1,580,323	-				-0.6
1,580,341	+				-0.2
1,580,349	-		CCNA_01473	0.10	+0.2
1,580,354	-		CCNA_01473	0.10	-0.8
1,580,424	+		CCNA_01473	0.14	-0.4
1,580,429	+		CCNA_01473	0.14	+0.3
1,580,437	-		CCNA_01473	0.14	-0.7
1,580,482	-		CCNA_01473	0.16	+0.3
1,580,489	+		CCNA_01473	0.17	-2.1
1,580,498	-		CCNA_01473	0.17	+0.3
1,580,510	+		CCNA_01473	0.17	-0.6
1,580,510	+		CCNA_01473	0.17	+0.9
1,580,518	-		CCNA_01473	0.18	-0.7
1,580,520	+		CCNA_01473	0.18	+1.2
1,580,553	-		CCNA_01473	0.19	+0.3
1,580,591	+		CCNA_01473	0.21	-0.8
1,580,591	+		CCNA_01473	0.21	-1.4
1,580,601	-		CCNA_01473	0.22	-0.0
1,580,631	+		CCNA_01473	0.23	-0.6
1,580,640	+		CCNA_01473	0.23	+0.3
1,580,657	+		CCNA_01473	0.24	-1.6
1,580,657	+		CCNA_01473	0.24	+1.1
1,580,691	+		CCNA_01473	0.26	-0.3
1,580,694	-		CCNA_01473	0.26	-2.1
1,580,700	-		CCNA_01473	0.26	-0.4
1,580,870	-		CCNA_01473	0.34	-1.3
1,580,938	-		CCNA_01473	0.37	-0.0
1,580,994	-		CCNA_01473	0.40	+0.1
1,581,003	+		CCNA_01473	0.40	-0.5