Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01466

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,573,340	+		CCNA_01465	0.46	-0.1
1,573,357	+		CCNA_01465	0.47	-0.8
1,573,438	-		CCNA_01465	0.52	-0.8
1,573,594	-		CCNA_01465	0.62	-0.6
1,573,628	+		CCNA_01465	0.64	+1.1
1,573,641	-		CCNA_01465	0.65	-0.6
1,573,703	+		CCNA_01465	0.69	+1.0
1,573,740	-		CCNA_01465	0.71	+0.6
1,573,825	+		CCNA_01465	0.76	-1.6
1,573,826	-		CCNA_01465	0.76	-1.1
1,573,833	-		CCNA_01465	0.77	-1.3
1,573,844	-		CCNA_01465	0.78	-0.5
1,573,849	+		CCNA_01465	0.78	-0.0
1,573,859	+		CCNA_01465	0.79	+0.8
1,573,859	+		CCNA_01465	0.79	-0.3
1,573,859	+		CCNA_01465	0.79	+0.5
1,573,866	+		CCNA_01465	0.79	+0.4
1,573,867	-		CCNA_01465	0.79	+0.3
1,573,874	-		CCNA_01465	0.79	-0.8
1,573,887	+		CCNA_01465	0.80	+0.8
1,573,892	+		CCNA_01465	0.81	-0.1
1,573,895	-		CCNA_01465	0.81	-0.1
1,573,940	-		CCNA_01465	0.84	-0.8
1,573,940	-		CCNA_01465	0.84	+0.2
1,573,984	-		CCNA_01465	0.86	-2.8
1,574,061	+				+1.1
1,574,066	+				+0.1
1,574,112	-				-0.2
1,574,117	-				+0.1
1,574,124	+				+1.2
1,574,143	+				+0.2
1,574,153	+				+0.5
1,574,221	-				+0.1
1,574,231	-				+0.6
1,574,243	+				+0.4
1,574,243	+				-1.5
1,574,243	+				+1.1
1,574,251	-				-2.1
1,574,251	-				+0.6
1,574,251	-				-0.3
1,574,296	+				+0.1
1,574,316	+				-0.5
1,574,322	-				+0.0
1,574,322	-				-0.6
1,574,322	-				-1.0
1,574,322	-				+0.1
1,574,336	-				-0.8
1,574,338	+				-0.3
1,574,346	-				+0.3
1,574,380	-		CCNA_01466	0.21	-1.0
1,574,416	+		CCNA_01466	0.35	-0.7
1,574,424	-		CCNA_01466	0.38	-0.0
1,574,426	+		CCNA_01466	0.39	-1.4
1,574,426	+		CCNA_01466	0.39	+0.3
1,574,434	-		CCNA_01466	0.42	-1.5
1,574,465	+		CCNA_01466	0.53	-1.3
1,574,470	+		CCNA_01466	0.55	+0.3
1,574,527	-		CCNA_01466	0.76	+0.6
1,574,538	-		CCNA_01466	0.81	+1.1
1,574,565	-				-0.6
1,574,589	+				-1.6
1,574,610	+				-1.7
1,574,613	-				+0.8
1,574,614	+				-2.7
1,574,614	+				-0.3
1,574,647	-				-0.0
1,574,647	-				+0.2
1,574,647	-				-1.1
1,574,647	-				-1.6
1,574,647	-				-0.5
1,574,647	-				-0.6
1,574,647	-				+0.7
1,574,674	-				-1.1
1,574,704	-				+0.1
1,574,706	+				-0.4
1,574,714	-				+0.5
1,574,763	+				-1.4
1,574,801	+				-0.5
1,574,801	+				-1.1
1,574,801	+				-0.7
1,574,801	+				+0.0
1,574,809	-				+0.9
1,574,953	+		CCNA_01467	0.15	+0.4
1,574,970	+		CCNA_01467	0.16	-0.6
1,574,994	+		CCNA_01467	0.17	-0.8
1,575,062	-		CCNA_01467	0.21	-1.1
1,575,097	+		CCNA_01467	0.23	-0.9
1,575,103	-		CCNA_01467	0.24	-2.7
1,575,105	-		CCNA_01467	0.24	-2.0
1,575,134	+		CCNA_01467	0.26	-0.2
1,575,145	+		CCNA_01467	0.26	-1.0
1,575,146	+		CCNA_01467	0.26	-0.6
1,575,154	-		CCNA_01467	0.27	+0.6
1,575,166	+		CCNA_01467	0.28	-1.0
1,575,174	-		CCNA_01467	0.28	-0.8
1,575,186	+		CCNA_01467	0.29	-2.8
1,575,277	+		CCNA_01467	0.34	-0.2
1,575,301	+		CCNA_01467	0.36	+2.1
1,575,309	-		CCNA_01467	0.36	-0.7
1,575,326	-		CCNA_01467	0.37	-1.1
1,575,378	+		CCNA_01467	0.40	+0.6
1,575,386	-		CCNA_01467	0.41	-0.8
1,575,386	-		CCNA_01467	0.41	-1.8
1,575,424	+		CCNA_01467	0.43	-0.6
1,575,442	-		CCNA_01467	0.44	+0.4
1,575,493	-		CCNA_01467	0.47	+1.1
1,575,493	-		CCNA_01467	0.47	-0.6
1,575,493	-		CCNA_01467	0.47	+0.2
1,575,493	-		CCNA_01467	0.47	-1.9
1,575,503	-		CCNA_01467	0.48	-0.8
1,575,517	+		CCNA_01467	0.49	-0.6
1,575,517	+		CCNA_01467	0.49	-0.3
1,575,525	-		CCNA_01467	0.49	-1.4
1,575,529	-		CCNA_01467	0.50	+0.3
1,575,530	-		CCNA_01467	0.50	-0.2
1,575,553	+		CCNA_01467	0.51	-1.0
1,575,587	+		CCNA_01467	0.53	-0.7
1,575,587	-		CCNA_01467	0.53	+0.6