Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01384

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,499,837	+		CCNA_01382	0.77	+0.7
1,499,837	+		CCNA_01382	0.77	-3.0
1,499,837	+		CCNA_01382	0.77	-0.0
1,499,837	+		CCNA_01382	0.77	+0.2
1,499,837	+		CCNA_01382	0.77	+1.6
1,499,845	-		CCNA_01382	0.78	+0.4
1,499,845	-		CCNA_01382	0.78	+0.4
1,499,981	+		CCNA_01382	0.85	+0.2
1,500,019	-		CCNA_01382	0.87	-0.4
1,500,157	+				+0.2
1,500,157	+				+0.1
1,500,165	-				-2.1
1,500,165	-				-1.8
1,500,246	+				+0.7
1,500,246	+				-0.8
1,500,246	+				+0.6
1,500,251	+				+2.2
1,500,253	-				+0.4
1,500,254	-				-0.2
1,500,254	-				-0.3
1,500,259	-				-0.2
1,500,259	-				-1.7
1,500,309	+		CCNA_01383	0.18	+0.6
1,500,309	+		CCNA_01383	0.18	+0.5
1,500,309	+		CCNA_01383	0.18	+0.1
1,500,309	+		CCNA_01383	0.18	+0.5
1,500,309	+		CCNA_01383	0.18	+0.1
1,500,309	+		CCNA_01383	0.18	-1.0
1,500,309	+		CCNA_01383	0.18	+1.2
1,500,312	-		CCNA_01383	0.19	+0.3
1,500,317	-		CCNA_01383	0.20	-0.1
1,500,317	-		CCNA_01383	0.20	-0.2
1,500,334	+		CCNA_01383	0.25	-0.1
1,500,334	+		CCNA_01383	0.25	-2.0
1,500,443	+		CCNA_01383	0.55	+1.0
1,500,462	+		CCNA_01383	0.60	+0.1
1,500,462	+		CCNA_01383	0.60	+1.1
1,500,573	-				+0.1
1,500,588	+				+0.2
1,500,596	-				+0.1
1,500,630	+				+0.4
1,500,638	-				-0.9
1,500,665	+				-1.3
1,500,686	+				-0.1
1,500,742	+				+0.5
1,500,750	-				+0.6
1,500,785	-				+1.1
1,500,819	+				+0.3
1,500,827	-				+0.7
1,500,827	-				+0.5
1,500,829	+				+0.4
1,500,842	-				-0.2
1,500,842	-				+0.6
1,500,892	+		CCNA_01384	0.13	-1.3
1,500,937	-		CCNA_01384	0.16	+0.6
1,500,951	-		CCNA_01384	0.17	+0.8
1,500,951	-		CCNA_01384	0.17	-1.0
1,500,958	+		CCNA_01384	0.17	-1.6
1,500,966	-		CCNA_01384	0.18	+0.4
1,500,969	+		CCNA_01384	0.18	+0.9
1,500,977	-		CCNA_01384	0.19	-0.9
1,500,987	+		CCNA_01384	0.19	+0.6
1,500,991	+		CCNA_01384	0.20	+1.1
1,500,997	+		CCNA_01384	0.20	-1.0
1,501,015	-		CCNA_01384	0.21	+0.2
1,501,021	+		CCNA_01384	0.22	+0.9
1,501,078	+		CCNA_01384	0.25	+0.8
1,501,078	+		CCNA_01384	0.25	-1.7
1,501,097	+		CCNA_01384	0.27	-0.3
1,501,105	-		CCNA_01384	0.27	+0.2
1,501,106	-		CCNA_01384	0.27	-0.0
1,501,111	-		CCNA_01384	0.28	-1.3
1,501,111	-		CCNA_01384	0.28	+0.4
1,501,112	+		CCNA_01384	0.28	-0.9
1,501,140	+		CCNA_01384	0.30	+0.6
1,501,141	+		CCNA_01384	0.30	+0.1
1,501,155	-		CCNA_01384	0.31	+0.1
1,501,211	-		CCNA_01384	0.34	+1.1
1,501,211	-		CCNA_01384	0.34	+0.1
1,501,269	-		CCNA_01384	0.38	+1.3
1,501,272	-		CCNA_01384	0.39	-0.3
1,501,295	-		CCNA_01384	0.40	-0.1
1,501,351	+		CCNA_01384	0.44	+0.4
1,501,351	+		CCNA_01384	0.44	+0.3
1,501,352	+		CCNA_01384	0.44	+0.0
1,501,359	-		CCNA_01384	0.44	+0.1
1,501,360	-		CCNA_01384	0.44	+0.2
1,501,393	+		CCNA_01384	0.47	+0.4
1,501,434	+		CCNA_01384	0.49	+0.9
1,501,469	-		CCNA_01384	0.52	+0.8
1,501,473	+		CCNA_01384	0.52	+0.5
1,501,495	-		CCNA_01384	0.53	+0.0
1,501,538	+		CCNA_01384	0.56	-0.3
1,501,553	+		CCNA_01384	0.57	-0.6
1,501,594	+		CCNA_01384	0.60	+0.1
1,501,599	+		CCNA_01384	0.60	-1.1
1,501,628	-		CCNA_01384	0.62	+0.8
1,501,685	+		CCNA_01384	0.66	-0.4
1,501,861	+		CCNA_01384	0.78	+0.6
1,501,869	-		CCNA_01384	0.79	-0.4
1,501,887	-		CCNA_01384	0.80	+1.4
1,501,905	+		CCNA_01384	0.81	-0.2
1,501,906	-		CCNA_01384	0.81	+0.5
1,501,927	+		CCNA_01384	0.83	-0.4
1,501,927	+		CCNA_01384	0.83	-0.3
1,501,935	-		CCNA_01384	0.83	-1.3
1,501,935	-		CCNA_01384	0.83	-0.1
1,501,935	-		CCNA_01384	0.83	-1.0
1,501,946	-		CCNA_01384	0.84	+0.7
1,501,979	-		CCNA_01384	0.86	+1.1
1,501,992	+		CCNA_01384	0.87	+1.1
1,502,001	-		CCNA_01384	0.88	-0.4
1,502,001	-		CCNA_01384	0.88	-0.1
1,502,007	-		CCNA_01384	0.88	-0.1
1,502,082	+				-1.1
1,502,101	+				+0.2
1,502,132	-				-0.4
1,502,132	-				+1.2
1,502,132	-				-0.8
1,502,132	-				-1.8
1,502,193	+				+0.9
1,502,198	+				+0.9
1,502,251	+				+0.2
1,502,251	+				-0.5
1,502,259	+				-0.5
1,502,267	-				+2.0
1,502,269	+				-2.1
1,502,370	-				-0.1
1,502,477	+		CCNA_01385	0.23	-0.1
1,502,485	-		CCNA_01385	0.24	-0.1
1,502,528	+		CCNA_01385	0.30	+0.6
1,502,552	-		CCNA_01385	0.33	+0.6
1,502,603	-		CCNA_01385	0.40	+0.3
1,502,621	-		CCNA_01385	0.43	+0.2
1,502,659	+		CCNA_01385	0.48	+1.6
1,502,728	-		CCNA_01385	0.58	-0.3
1,502,742	+		CCNA_01385	0.59	+0.8
1,502,777	+		CCNA_01385	0.64	+0.2
1,502,777	+		CCNA_01385	0.64	+0.5
1,502,777	+		CCNA_01385	0.64	+0.3
1,502,777	+		CCNA_01385	0.64	-0.0
1,502,777	+		CCNA_01385	0.64	+0.4
1,502,777	+		CCNA_01385	0.64	+1.6
1,502,785	-		CCNA_01385	0.65	-1.9
1,502,785	-		CCNA_01385	0.65	-0.1
1,502,785	-		CCNA_01385	0.65	+0.3
1,502,795	-		CCNA_01385	0.67	-0.7
1,502,826	-		CCNA_01385	0.71	-0.8
1,502,849	+		CCNA_01385	0.74	-0.2
1,502,876	-		CCNA_01385	0.78	+0.4
1,502,887	-		CCNA_01385	0.79	-1.2
1,502,887	-		CCNA_01385	0.79	+0.2
1,502,888	+		CCNA_01385	0.79	+0.4
1,502,889	+		CCNA_01385	0.80	-0.3
1,502,904	-		CCNA_01385	0.82	-1.0
1,502,930	-		CCNA_01385	0.85	+1.0
1,502,939	+		CCNA_01385	0.86	+0.6
1,502,939	+		CCNA_01385	0.86	+0.9
1,502,961	+		CCNA_01385	0.89	+0.5
1,502,972	+				+0.4
1,502,992	+				-0.2
1,503,003	-				-0.5
1,503,025	-				+2.3
1,503,032	+				+0.8
1,503,032	+				+0.6
1,503,124	-				+0.4
1,503,140	+				-0.4
1,503,151	+				+0.3
1,503,158	-				-0.0