Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01353

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,464,853	+		CCNA_01352	0.55	-0.5
1,464,861	-		CCNA_01352	0.55	+1.2
1,464,861	-		CCNA_01352	0.55	+0.6
1,464,885	-		CCNA_01352	0.57	-0.1
1,464,885	-		CCNA_01352	0.57	+0.3
1,464,980	+		CCNA_01352	0.63	-2.1
1,464,980	+		CCNA_01352	0.63	-0.8
1,464,980	+		CCNA_01352	0.63	-1.0
1,464,980	+		CCNA_01352	0.63	-0.9
1,464,987	+		CCNA_01352	0.63	-0.1
1,464,988	-		CCNA_01352	0.63	-0.4
1,464,988	-		CCNA_01352	0.63	+0.2
1,464,988	-		CCNA_01352	0.63	-0.0
1,464,988	-		CCNA_01352	0.63	+0.3
1,464,995	-		CCNA_01352	0.64	-0.3
1,465,002	+		CCNA_01352	0.64	-1.1
1,465,139	+		CCNA_01352	0.72	-0.4
1,465,139	+		CCNA_01352	0.72	-0.1
1,465,147	-		CCNA_01352	0.73	+0.4
1,465,147	-		CCNA_01352	0.73	+1.0
1,465,147	-		CCNA_01352	0.73	+0.5
1,465,203	-		CCNA_01352	0.76	+0.4
1,465,205	-		CCNA_01352	0.76	+0.1
1,465,218	-		CCNA_01352	0.77	+0.0
1,465,236	-		CCNA_01352	0.78	+0.6
1,465,237	-		CCNA_01352	0.78	+0.2
1,465,273	-		CCNA_01352	0.81	+0.9
1,465,284	+		CCNA_01352	0.81	-0.6
1,465,303	-		CCNA_01352	0.82	+0.6
1,465,317	+		CCNA_01352	0.83	+1.9
1,465,317	+		CCNA_01352	0.83	+1.0
1,465,333	+		CCNA_01352	0.84	-0.0
1,465,349	-		CCNA_01352	0.85	-0.8
1,465,370	-		CCNA_01352	0.87	-0.0
1,465,370	-		CCNA_01352	0.87	-0.2
1,465,408	-		CCNA_01352	0.89	+0.2
1,465,441	-				+0.6
1,465,441	-				+0.7
1,465,510	+				+1.0
1,465,569	+				+0.9
1,465,570	+				+0.4
1,465,585	+				-0.8
1,465,611	+				-1.1
1,465,621	-				+0.1
1,465,622	+				-0.1
1,465,638	+				-0.9
1,465,664	+				+0.3
1,465,664	+				-0.2
1,465,702	+				-1.3
1,465,713	+				+0.0
1,465,739	+				+2.3
1,465,739	+				+0.4
1,465,739	+				+0.6
1,465,739	+				-0.0
1,465,739	+				-1.3
1,465,747	-				-0.9
1,465,747	-				+0.1
1,465,749	+				-0.3
1,465,793	+				+0.4
1,465,801	+				-0.7
1,465,801	-				-0.1
1,465,834	+				-1.0
1,465,842	-				+0.4
1,465,875	-				-0.6
1,465,879	+				-0.5
1,465,887	-				-0.5
1,465,887	-				+0.5
1,465,887	-				-0.5
1,465,889	+				+0.7
1,465,897	-				+0.7
1,465,945	-				+0.6
1,465,961	+				-1.6
1,465,993	+				-0.5
1,466,017	-				+0.6
1,466,064	+		CCNA_01353	0.10	-2.0
1,466,103	-		CCNA_01353	0.12	+0.3
1,466,103	-		CCNA_01353	0.12	+0.2
1,466,103	-		CCNA_01353	0.12	-0.7
1,466,142	+		CCNA_01353	0.14	+0.1
1,466,143	-		CCNA_01353	0.14	+0.4
1,466,144	-		CCNA_01353	0.14	-1.6
1,466,170	+		CCNA_01353	0.16	+0.3
1,466,170	+		CCNA_01353	0.16	-1.8
1,466,170	+		CCNA_01353	0.16	-0.1
1,466,188	+		CCNA_01353	0.17	+0.3
1,466,196	-		CCNA_01353	0.17	-0.5
1,466,201	-		CCNA_01353	0.17	-0.7
1,466,232	+		CCNA_01353	0.19	-0.1
1,466,245	-		CCNA_01353	0.19	-0.5
1,466,261	-		CCNA_01353	0.20	-0.6
1,466,288	-		CCNA_01353	0.21	-0.9
1,466,356	+		CCNA_01353	0.25	-1.5
1,466,356	+		CCNA_01353	0.25	+0.5
1,466,356	+		CCNA_01353	0.25	-0.6
1,466,356	+		CCNA_01353	0.25	+1.0
1,466,361	+		CCNA_01353	0.25	-0.3
1,466,361	+		CCNA_01353	0.25	-1.0
1,466,364	-		CCNA_01353	0.25	-0.1
1,466,369	-		CCNA_01353	0.25	+0.3
1,466,392	+		CCNA_01353	0.27	-0.1
1,466,404	+		CCNA_01353	0.27	+0.8
1,466,413	-		CCNA_01353	0.28	+3.1
1,466,470	+		CCNA_01353	0.30	-0.7
1,466,472	+		CCNA_01353	0.31	-0.3
1,466,478	-		CCNA_01353	0.31	+1.1
1,466,478	-		CCNA_01353	0.31	+0.1
1,466,478	-		CCNA_01353	0.31	-0.5
1,466,479	+		CCNA_01353	0.31	-1.5
1,466,495	+		CCNA_01353	0.32	-0.9
1,466,495	+		CCNA_01353	0.32	+1.1
1,466,495	+		CCNA_01353	0.32	-1.0
1,466,503	-		CCNA_01353	0.32	-0.2
1,466,503	-		CCNA_01353	0.32	+0.3
1,466,509	+		CCNA_01353	0.32	-0.0
1,466,522	-		CCNA_01353	0.33	-0.1
1,466,525	-		CCNA_01353	0.33	-1.1
1,466,527	-		CCNA_01353	0.33	+3.4
1,466,527	-		CCNA_01353	0.33	+1.0
1,466,552	-		CCNA_01353	0.34	-1.5
1,466,552	-		CCNA_01353	0.34	-0.7
1,466,563	+		CCNA_01353	0.35	+0.6
1,466,622	+		CCNA_01353	0.38	+0.5
1,466,632	+		CCNA_01353	0.38	-1.3
1,466,658	+		CCNA_01353	0.40	+0.3
1,466,686	+		CCNA_01353	0.41	-1.5
1,466,688	+		CCNA_01353	0.41	+0.2
1,466,695	+		CCNA_01353	0.42	+0.3
1,466,696	-		CCNA_01353	0.42	+0.2
1,466,696	-		CCNA_01353	0.42	-0.4
1,466,760	-		CCNA_01353	0.45	-0.1
1,466,766	+		CCNA_01353	0.45	-0.0
1,466,810	-		CCNA_01353	0.47	-1.4
1,466,827	-		CCNA_01353	0.48	+0.0
1,466,828	-		CCNA_01353	0.48	+1.1
1,466,861	+		CCNA_01353	0.50	+0.5
1,466,864	-		CCNA_01353	0.50	+0.4
1,466,864	-		CCNA_01353	0.50	+0.2
1,466,872	+		CCNA_01353	0.50	-0.3
1,466,901	+		CCNA_01353	0.52	-1.1
1,466,906	+		CCNA_01353	0.52	-0.8
1,466,906	+		CCNA_01353	0.52	+0.6
1,466,914	-		CCNA_01353	0.52	+0.9
1,466,914	-		CCNA_01353	0.52	+0.1
1,466,994	+		CCNA_01353	0.56	+0.7
1,467,012	-		CCNA_01353	0.57	-0.6
1,467,013	-		CCNA_01353	0.57	-1.5
1,467,022	-		CCNA_01353	0.58	+1.0
1,467,057	+		CCNA_01353	0.59	-0.1
1,467,105	+		CCNA_01353	0.62	+0.3
1,467,160	-		CCNA_01353	0.64	-2.1
1,467,164	+		CCNA_01353	0.65	-0.8
1,467,193	+		CCNA_01353	0.66	-0.9
1,467,212	+		CCNA_01353	0.67	+1.2
1,467,228	+		CCNA_01353	0.68	-1.2
1,467,231	-		CCNA_01353	0.68	-2.3
1,467,276	+		CCNA_01353	0.70	+0.4
1,467,276	+		CCNA_01353	0.70	-0.1
1,467,284	-		CCNA_01353	0.71	+2.4
1,467,284	-		CCNA_01353	0.71	-0.6
1,467,316	-		CCNA_01353	0.72	+0.2
1,467,334	-		CCNA_01353	0.73	-0.9
1,467,346	+		CCNA_01353	0.74	-0.4
1,467,376	-		CCNA_01353	0.75	+0.6
1,467,400	+		CCNA_01353	0.76	-0.5
1,467,425	+		CCNA_01353	0.78	+0.4
1,467,425	+		CCNA_01353	0.78	-0.2
1,467,425	+		CCNA_01353	0.78	-0.4
1,467,425	+		CCNA_01353	0.78	-0.8
1,467,426	+		CCNA_01353	0.78	+0.1
1,467,433	-		CCNA_01353	0.78	-0.3
1,467,433	-		CCNA_01353	0.78	-0.4
1,467,433	-		CCNA_01353	0.78	+1.4
1,467,433	-		CCNA_01353	0.78	-1.7
1,467,433	-		CCNA_01353	0.78	+1.4
1,467,433	-		CCNA_01353	0.78	+0.3
1,467,455	-		CCNA_01353	0.79	-1.2
1,467,472	+		CCNA_01353	0.80	+0.4
1,467,485	+		CCNA_01353	0.80	+1.1
1,467,526	-		CCNA_01353	0.82	+2.4
1,467,541	-		CCNA_01353	0.83	+1.9
1,467,599	+		CCNA_01353	0.86	-0.1
1,467,616	-		CCNA_01353	0.87	+1.3
1,467,618	+		CCNA_01353	0.87	-1.0
1,467,626	-		CCNA_01353	0.87	-0.1
1,467,626	-		CCNA_01353	0.87	+1.5
1,467,626	-		CCNA_01353	0.87	+0.3
1,467,745	-				-0.2
1,467,761	+				-0.7
1,467,761	+				-0.5
1,467,769	-				-0.3
1,467,769	-				+2.1
1,467,813	+				+0.7
1,467,820	-				-0.9
1,467,821	-				+1.7
1,467,821	-				-0.2
1,467,821	-				+0.0
1,467,853	+				-0.2
1,467,865	+				+0.6
1,467,927	+				+0.6
1,467,930	-				-0.1
1,467,935	-				-0.9
1,467,969	+				-1.5
1,468,004	+				+0.4
1,468,018	+				-0.9
1,468,026	-				+0.3
1,468,051	-				-1.0
1,468,114	-				+0.1
1,468,119	+				+0.1
1,468,134	-				+0.1
1,468,139	-				+0.3
1,468,154	+				-0.3
1,468,175	-				+0.3
1,468,175	-				-0.5
1,468,175	-				+0.3
1,468,199	-				+0.7
1,468,218	-				+0.7
1,468,218	-				+0.2
1,468,218	-				+0.5
1,468,247	+				-0.1
1,468,274	-				+0.6
1,468,274	-				+1.2
1,468,274	-				+0.5
1,468,274	-				+0.4
1,468,274	-				-1.3
1,468,310	-				-0.3
1,468,310	-				-0.2
1,468,352	+		CCNA_01354	0.14	-0.5
1,468,437	+		CCNA_01354	0.23	-0.2
1,468,437	+		CCNA_01354	0.23	+0.5
1,468,445	-		CCNA_01354	0.24	+0.1
1,468,458	+		CCNA_01354	0.25	-1.1
1,468,458	+		CCNA_01354	0.25	+0.4
1,468,461	-		CCNA_01354	0.25	-0.2
1,468,466	-		CCNA_01354	0.26	+0.2
1,468,481	+		CCNA_01354	0.27	-0.2
1,468,496	-		CCNA_01354	0.29	+0.1
1,468,501	-		CCNA_01354	0.29	-0.3
1,468,529	-		CCNA_01354	0.32	-0.2
1,468,544	-		CCNA_01354	0.34	-0.3
1,468,544	-		CCNA_01354	0.34	-0.3
1,468,557	+		CCNA_01354	0.35	-0.6
1,468,572	-		CCNA_01354	0.36	+0.3
1,468,573	+		CCNA_01354	0.37	+1.3
1,468,581	-		CCNA_01354	0.37	-0.6
1,468,626	+		CCNA_01354	0.42	+0.1
1,468,626	+		CCNA_01354	0.42	-0.9
1,468,650	+		CCNA_01354	0.44	+0.5
1,468,650	+		CCNA_01354	0.44	-0.7
1,468,658	-		CCNA_01354	0.45	+0.1
1,468,670	+		CCNA_01354	0.46	-1.9
1,468,687	+		CCNA_01354	0.48	-0.1
1,468,715	+		CCNA_01354	0.51	-1.0
1,468,759	-		CCNA_01354	0.55	+0.4
1,468,766	-		CCNA_01354	0.56	-1.2
1,468,768	+		CCNA_01354	0.56	+0.5
1,468,776	-		CCNA_01354	0.57	-0.1
1,468,802	-		CCNA_01354	0.60	-0.7
1,468,849	+		CCNA_01354	0.65	-2.1
1,468,858	-		CCNA_01354	0.65	+0.7
1,468,866	-		CCNA_01354	0.66	-1.1
1,468,867	+		CCNA_01354	0.66	-0.2