Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01352

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,463,159	-				-0.1
1,463,342	+		CCNA_01351	0.16	+0.2
1,463,371	-		CCNA_01351	0.20	+0.3
1,463,371	-		CCNA_01351	0.20	+0.5
1,463,385	+		CCNA_01351	0.22	-0.5
1,463,385	+		CCNA_01351	0.22	+0.2
1,463,385	-		CCNA_01351	0.22	+0.3
1,463,414	+		CCNA_01351	0.26	-0.1
1,463,422	-		CCNA_01351	0.27	+0.7
1,463,444	-		CCNA_01351	0.30	+0.8
1,463,444	-		CCNA_01351	0.30	-0.4
1,463,446	+		CCNA_01351	0.30	-2.4
1,463,474	+		CCNA_01351	0.34	+0.5
1,463,628	+		CCNA_01351	0.55	-0.7
1,463,677	+		CCNA_01351	0.62	-0.9
1,463,683	-		CCNA_01351	0.62	-0.1
1,463,685	-		CCNA_01351	0.63	-0.1
1,463,693	-		CCNA_01351	0.64	+0.5
1,463,702	+		CCNA_01351	0.65	-1.3
1,463,712	+		CCNA_01351	0.66	-0.2
1,463,714	+		CCNA_01351	0.67	+0.1
1,463,749	+		CCNA_01351	0.71	-0.7
1,463,757	-		CCNA_01351	0.73	+0.1
1,463,842	+		CCNA_01351	0.84	-0.5
1,463,850	-		CCNA_01351	0.85	+0.4
1,463,860	-		CCNA_01351	0.87	+0.7
1,463,860	-		CCNA_01351	0.87	+1.2
1,463,869	-		CCNA_01351	0.88	-0.4
1,463,879	-		CCNA_01351	0.89	+0.3
1,463,987	-				+1.7
1,463,998	+				-1.3
1,463,999	+				-0.6
1,463,999	+				-1.2
1,464,004	+				-1.7
1,464,007	-				+0.9
1,464,007	-				+0.2
1,464,024	-				+0.1
1,464,040	+				+1.0
1,464,043	-				+0.1
1,464,048	-				+0.3
1,464,048	-				-0.7
1,464,088	+				-0.6
1,464,088	+				+0.9
1,464,088	+				+0.5
1,464,096	-				+0.6
1,464,096	-				+0.9
1,464,096	-				+0.4
1,464,096	-				-0.2
1,464,096	-				-0.2
1,464,102	-				-0.0
1,464,192	+		CCNA_01352	0.14	+0.5
1,464,200	-		CCNA_01352	0.15	+0.0
1,464,227	+		CCNA_01352	0.17	+0.4
1,464,282	+		CCNA_01352	0.20	-0.4
1,464,282	+		CCNA_01352	0.20	-3.8
1,464,290	-		CCNA_01352	0.20	+0.3
1,464,290	-		CCNA_01352	0.20	-0.8
1,464,316	+		CCNA_01352	0.22	+0.3
1,464,360	-		CCNA_01352	0.25	+0.3
1,464,360	-		CCNA_01352	0.25	+0.5
1,464,385	+		CCNA_01352	0.26	-0.2
1,464,401	-		CCNA_01352	0.27	-0.7
1,464,430	+		CCNA_01352	0.29	-1.2
1,464,444	-		CCNA_01352	0.30	-0.9
1,464,451	+		CCNA_01352	0.30	-1.6
1,464,459	-		CCNA_01352	0.31	+1.2
1,464,459	-		CCNA_01352	0.31	+0.1
1,464,459	-		CCNA_01352	0.31	-0.1
1,464,459	-		CCNA_01352	0.31	+0.5
1,464,461	+		CCNA_01352	0.31	+0.4
1,464,466	+		CCNA_01352	0.31	+0.4
1,464,474	-		CCNA_01352	0.32	-0.9
1,464,515	+		CCNA_01352	0.34	-0.8
1,464,594	-		CCNA_01352	0.39	-0.4
1,464,594	-		CCNA_01352	0.39	-0.3
1,464,629	-		CCNA_01352	0.41	-0.6
1,464,631	+		CCNA_01352	0.41	+0.5
1,464,631	+		CCNA_01352	0.41	-0.8
1,464,631	+		CCNA_01352	0.41	-0.2
1,464,639	-		CCNA_01352	0.42	+0.7
1,464,639	-		CCNA_01352	0.42	+0.7
1,464,639	-		CCNA_01352	0.42	-0.5
1,464,639	-		CCNA_01352	0.42	+0.8
1,464,717	-		CCNA_01352	0.47	-0.2
1,464,733	+		CCNA_01352	0.48	-0.4
1,464,757	-		CCNA_01352	0.49	-0.6
1,464,766	-		CCNA_01352	0.50	+0.2
1,464,787	-		CCNA_01352	0.51	+0.2
1,464,796	+		CCNA_01352	0.51	-0.1
1,464,804	-		CCNA_01352	0.52	+0.0
1,464,815	-		CCNA_01352	0.53	+0.1
1,464,853	+		CCNA_01352	0.55	-0.5
1,464,861	-		CCNA_01352	0.55	+1.2
1,464,861	-		CCNA_01352	0.55	+0.6
1,464,885	-		CCNA_01352	0.57	-0.1
1,464,885	-		CCNA_01352	0.57	+0.3
1,464,980	+		CCNA_01352	0.63	-2.1
1,464,980	+		CCNA_01352	0.63	-0.8
1,464,980	+		CCNA_01352	0.63	-1.0
1,464,980	+		CCNA_01352	0.63	-0.9
1,464,987	+		CCNA_01352	0.63	-0.1
1,464,988	-		CCNA_01352	0.63	-0.4
1,464,988	-		CCNA_01352	0.63	+0.2
1,464,988	-		CCNA_01352	0.63	-0.0
1,464,988	-		CCNA_01352	0.63	+0.3
1,464,995	-		CCNA_01352	0.64	-0.3
1,465,002	+		CCNA_01352	0.64	-1.1
1,465,139	+		CCNA_01352	0.72	-0.4
1,465,139	+		CCNA_01352	0.72	-0.1
1,465,147	-		CCNA_01352	0.73	+0.4
1,465,147	-		CCNA_01352	0.73	+1.0
1,465,147	-		CCNA_01352	0.73	+0.5
1,465,203	-		CCNA_01352	0.76	+0.4
1,465,205	-		CCNA_01352	0.76	+0.1
1,465,218	-		CCNA_01352	0.77	+0.0
1,465,236	-		CCNA_01352	0.78	+0.6
1,465,237	-		CCNA_01352	0.78	+0.2
1,465,273	-		CCNA_01352	0.81	+0.9
1,465,284	+		CCNA_01352	0.81	-0.6
1,465,303	-		CCNA_01352	0.82	+0.6
1,465,317	+		CCNA_01352	0.83	+1.9
1,465,317	+		CCNA_01352	0.83	+1.0
1,465,333	+		CCNA_01352	0.84	-0.0
1,465,349	-		CCNA_01352	0.85	-0.8
1,465,370	-		CCNA_01352	0.87	-0.0
1,465,370	-		CCNA_01352	0.87	-0.2
1,465,408	-		CCNA_01352	0.89	+0.2
1,465,441	-				+0.6
1,465,441	-				+0.7
1,465,510	+				+1.0
1,465,569	+				+0.9
1,465,570	+				+0.4
1,465,585	+				-0.8
1,465,611	+				-1.1
1,465,621	-				+0.1
1,465,622	+				-0.1
1,465,638	+				-0.9
1,465,664	+				+0.3
1,465,664	+				-0.2
1,465,702	+				-1.3
1,465,713	+				+0.0
1,465,739	+				+2.3
1,465,739	+				+0.4
1,465,739	+				+0.6
1,465,739	+				-0.0
1,465,739	+				-1.3
1,465,747	-				-0.9
1,465,747	-				+0.1
1,465,749	+				-0.3
1,465,793	+				+0.4
1,465,801	+				-0.7
1,465,801	-				-0.1
1,465,834	+				-1.0
1,465,842	-				+0.4
1,465,875	-				-0.6
1,465,879	+				-0.5
1,465,887	-				-0.5
1,465,887	-				+0.5
1,465,887	-				-0.5
1,465,889	+				+0.7
1,465,897	-				+0.7
1,465,945	-				+0.6
1,465,961	+				-1.6
1,465,993	+				-0.5
1,466,017	-				+0.6
1,466,064	+		CCNA_01353	0.10	-2.0
1,466,103	-		CCNA_01353	0.12	+0.3
1,466,103	-		CCNA_01353	0.12	+0.2
1,466,103	-		CCNA_01353	0.12	-0.7
1,466,142	+		CCNA_01353	0.14	+0.1
1,466,143	-		CCNA_01353	0.14	+0.4
1,466,144	-		CCNA_01353	0.14	-1.6
1,466,170	+		CCNA_01353	0.16	+0.3
1,466,170	+		CCNA_01353	0.16	-1.8
1,466,170	+		CCNA_01353	0.16	-0.1
1,466,188	+		CCNA_01353	0.17	+0.3
1,466,196	-		CCNA_01353	0.17	-0.5
1,466,201	-		CCNA_01353	0.17	-0.7
1,466,232	+		CCNA_01353	0.19	-0.1
1,466,245	-		CCNA_01353	0.19	-0.5
1,466,261	-		CCNA_01353	0.20	-0.6
1,466,288	-		CCNA_01353	0.21	-0.9
1,466,356	+		CCNA_01353	0.25	-1.5
1,466,356	+		CCNA_01353	0.25	+0.5
1,466,356	+		CCNA_01353	0.25	-0.6
1,466,356	+		CCNA_01353	0.25	+1.0
1,466,361	+		CCNA_01353	0.25	-0.3
1,466,361	+		CCNA_01353	0.25	-1.0
1,466,364	-		CCNA_01353	0.25	-0.1
1,466,369	-		CCNA_01353	0.25	+0.3
1,466,392	+		CCNA_01353	0.27	-0.1
1,466,404	+		CCNA_01353	0.27	+0.8
1,466,413	-		CCNA_01353	0.28	+3.1
1,466,470	+		CCNA_01353	0.30	-0.7
1,466,472	+		CCNA_01353	0.31	-0.3
1,466,478	-		CCNA_01353	0.31	+1.1
1,466,478	-		CCNA_01353	0.31	+0.1
1,466,478	-		CCNA_01353	0.31	-0.5
1,466,479	+		CCNA_01353	0.31	-1.5
1,466,495	+		CCNA_01353	0.32	-0.9
1,466,495	+		CCNA_01353	0.32	+1.1
1,466,495	+		CCNA_01353	0.32	-1.0
1,466,503	-		CCNA_01353	0.32	-0.2
1,466,503	-		CCNA_01353	0.32	+0.3
1,466,509	+		CCNA_01353	0.32	-0.0
1,466,522	-		CCNA_01353	0.33	-0.1
1,466,525	-		CCNA_01353	0.33	-1.1
1,466,527	-		CCNA_01353	0.33	+3.4
1,466,527	-		CCNA_01353	0.33	+1.0
1,466,552	-		CCNA_01353	0.34	-1.5
1,466,552	-		CCNA_01353	0.34	-0.7
1,466,563	+		CCNA_01353	0.35	+0.6