Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01258

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,384,521	-				-0.8
1,384,545	-				+0.2
1,384,545	-				-1.3
1,384,593	-				+0.5
1,384,612	-				+1.5
1,384,642	-				+0.2
1,384,649	-				-0.5
1,384,680	+		CCNA_01257	0.13	+0.5
1,384,748	+		CCNA_01257	0.20	-0.7
1,384,837	-		CCNA_01257	0.29	+2.1
1,385,079	-		CCNA_01257	0.55	+0.4
1,385,093	-		CCNA_01257	0.56	-0.8
1,385,093	-		CCNA_01257	0.56	-0.2
1,385,128	+		CCNA_01257	0.60	+0.8
1,385,128	+		CCNA_01257	0.60	-0.3
1,385,138	+		CCNA_01257	0.61	-0.7
1,385,146	-		CCNA_01257	0.62	+1.2
1,385,146	-		CCNA_01257	0.62	+1.6
1,385,151	+		CCNA_01257	0.62	-0.8
1,385,221	+		CCNA_01257	0.69	+1.8
1,385,221	+		CCNA_01257	0.69	-0.8
1,385,221	+		CCNA_01257	0.69	-1.6
1,385,233	+		CCNA_01257	0.71	+0.7
1,385,271	-		CCNA_01257	0.75	+0.1
1,385,277	+		CCNA_01257	0.75	-0.9
1,385,284	-		CCNA_01257	0.76	-0.6
1,385,320	+		CCNA_01257	0.80	-0.3
1,385,322	+		CCNA_01257	0.80	-0.1
1,385,372	+		CCNA_01257	0.85	-0.6
1,385,395	+		CCNA_01257	0.88	+0.7
1,385,445	+				-1.2
1,385,445	+				+0.5
1,385,447	+				-3.3
1,385,455	-				-1.1
1,385,479	-				+0.8
1,385,515	+				+1.0
1,385,526	+				+0.5
1,385,536	-				-0.1
1,385,572	-				+0.5
1,385,580	-		CCNA_01258	0.11	+0.6
1,385,603	+		CCNA_01258	0.14	+0.4
1,385,630	+		CCNA_01258	0.18	-0.7
1,385,642	+		CCNA_01258	0.20	-0.1
1,385,646	+		CCNA_01258	0.21	+0.4
1,385,646	+		CCNA_01258	0.21	+0.2
1,385,665	+		CCNA_01258	0.24	+0.2
1,385,689	+		CCNA_01258	0.27	-0.9
1,385,741	+		CCNA_01258	0.35	-0.2
1,385,758	-		CCNA_01258	0.38	-0.1
1,385,758	-		CCNA_01258	0.38	+0.4
1,385,794	-		CCNA_01258	0.43	+0.0
1,385,819	+		CCNA_01258	0.47	+0.5
1,385,819	+		CCNA_01258	0.47	+0.2
1,385,827	-		CCNA_01258	0.48	-0.2
1,385,827	-		CCNA_01258	0.48	+0.4
1,385,827	-		CCNA_01258	0.48	-2.0
1,385,831	-		CCNA_01258	0.49	-0.5
1,385,869	+		CCNA_01258	0.54	-0.8
1,385,872	-		CCNA_01258	0.55	-0.2
1,385,887	-		CCNA_01258	0.57	-0.2
1,385,959	-		CCNA_01258	0.68	+0.5
1,385,978	-		CCNA_01258	0.71	+0.2
1,385,978	-		CCNA_01258	0.71	+0.7
1,385,985	+		CCNA_01258	0.72	+0.5
1,386,002	-		CCNA_01258	0.74	-1.6
1,386,004	+		CCNA_01258	0.75	+0.4
1,386,013	-		CCNA_01258	0.76	+0.7
1,386,027	-		CCNA_01258	0.78	-0.8
1,386,047	+		CCNA_01258	0.81	+0.4
1,386,083	-		CCNA_01258	0.87	+0.4
1,386,090	-		CCNA_01258	0.88	-1.2
1,386,101	+		CCNA_01258	0.89	+0.0
1,386,121	-				-0.4
1,386,143	+				+0.5
1,386,147	+				-0.1
1,386,160	-				+1.4
1,386,173	+				+0.2
1,386,239	-				-0.2
1,386,255	+				+0.4
1,386,288	+				-0.2
1,386,303	+				+0.2
1,386,343	+				+0.8
1,386,344	-				-1.8
1,386,375	-				-1.6
1,386,425	+		CCNA_01259	0.13	+0.1
1,386,501	-		CCNA_01259	0.23	-0.1
1,386,525	-		CCNA_01259	0.26	-0.4
1,386,529	+		CCNA_01259	0.26	+0.6
1,386,536	+		CCNA_01259	0.27	+0.3
1,386,542	+		CCNA_01259	0.28	-0.3
1,386,544	-		CCNA_01259	0.28	+0.0
1,386,551	-		CCNA_01259	0.29	-0.5
1,386,555	-		CCNA_01259	0.30	+1.2
1,386,555	-		CCNA_01259	0.30	-1.0
1,386,561	-		CCNA_01259	0.30	-1.1
1,386,584	+		CCNA_01259	0.33	+0.8
1,386,589	+		CCNA_01259	0.34	+0.9
1,386,602	-		CCNA_01259	0.36	-0.6
1,386,657	+		CCNA_01259	0.43	-0.2
1,386,667	+		CCNA_01259	0.44	-0.5
1,386,673	-		CCNA_01259	0.45	+0.8
1,386,673	-		CCNA_01259	0.45	-2.0
1,386,789	+		CCNA_01259	0.60	+0.2
1,386,853	+		CCNA_01259	0.68	+0.0
1,386,902	-		CCNA_01259	0.74	-0.8
1,386,970	+		CCNA_01259	0.83	+0.5
1,387,025	+				+0.8
1,387,050	-				-2.2
1,387,055	-				-1.0
1,387,105	+				+1.0
1,387,115	+				+0.6