Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01242

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,366,625	+				-1.3
1,366,691	-				-1.7
1,366,727	-				+0.8
1,366,729	+				+0.5
1,366,744	+				+0.3
1,366,752	-				+0.2
1,366,752	-				+0.3
1,366,757	-				+0.0
1,366,797	-				-1.0
1,366,870	+		CCNA_01241	0.16	+0.1
1,366,913	+		CCNA_01241	0.22	+0.0
1,366,921	-		CCNA_01241	0.23	+0.5
1,366,928	-		CCNA_01241	0.24	-0.2
1,366,928	-		CCNA_01241	0.24	-0.2
1,366,952	-		CCNA_01241	0.27	+0.1
1,366,963	+		CCNA_01241	0.29	+0.1
1,366,993	+		CCNA_01241	0.33	-0.1
1,366,996	-		CCNA_01241	0.33	-0.3
1,367,013	+		CCNA_01241	0.36	-0.4
1,367,038	-		CCNA_01241	0.39	+1.5
1,367,043	-		CCNA_01241	0.40	+0.8
1,367,061	+		CCNA_01241	0.43	-0.2
1,367,061	+		CCNA_01241	0.43	-0.3
1,367,061	+		CCNA_01241	0.43	-0.6
1,367,078	+		CCNA_01241	0.45	+0.5
1,367,079	-		CCNA_01241	0.45	+1.0
1,367,092	-		CCNA_01241	0.47	-0.4
1,367,094	+		CCNA_01241	0.47	-0.7
1,367,094	+		CCNA_01241	0.47	+0.8
1,367,094	+		CCNA_01241	0.47	-0.9
1,367,094	+		CCNA_01241	0.47	+0.3
1,367,094	+		CCNA_01241	0.47	-0.9
1,367,102	-		CCNA_01241	0.48	-0.9
1,367,102	-		CCNA_01241	0.48	+0.5
1,367,102	-		CCNA_01241	0.48	+0.4
1,367,102	-		CCNA_01241	0.48	+0.4
1,367,102	-		CCNA_01241	0.48	+0.3
1,367,170	-		CCNA_01241	0.58	+0.3
1,367,170	-		CCNA_01241	0.58	+1.3
1,367,195	+		CCNA_01241	0.61	-0.8
1,367,195	+		CCNA_01241	0.61	-0.1
1,367,195	+		CCNA_01241	0.61	-0.1
1,367,195	+		CCNA_01241	0.61	-0.6
1,367,195	+		CCNA_01241	0.61	-0.6
1,367,195	+		CCNA_01241	0.61	-0.1
1,367,195	+		CCNA_01241	0.61	+0.0
1,367,195	+		CCNA_01241	0.61	+0.7
1,367,203	-		CCNA_01241	0.62	+0.1
1,367,203	-		CCNA_01241	0.62	+0.1
1,367,203	-		CCNA_01241	0.62	+0.6
1,367,203	-		CCNA_01241	0.62	+0.5
1,367,203	-		CCNA_01241	0.62	-1.3
1,367,210	+		CCNA_01241	0.63	+0.7
1,367,269	+		CCNA_01241	0.72	+0.5
1,367,272	-		CCNA_01241	0.72	+0.3
1,367,283	+		CCNA_01241	0.74	+0.1
1,367,311	+		CCNA_01241	0.77	+1.5
1,367,311	+		CCNA_01241	0.77	-0.3
1,367,311	+		CCNA_01241	0.77	+0.0
1,367,333	+		CCNA_01241	0.80	-0.4
1,367,341	-		CCNA_01241	0.82	+0.1
1,367,413	+				+0.3
1,367,413	+				-0.0
1,367,413	+				-0.2
1,367,421	-				-0.1
1,367,434	-				-0.1
1,367,469	-				-0.1
1,367,469	-				+0.1
1,367,469	-				+0.4
1,367,478	+				+1.6
1,367,486	-				+0.2
1,367,580	-				+0.3
1,367,580	-				+0.6
1,367,842	+		CCNA_01242	0.15	-0.0
1,368,129	-		CCNA_01242	0.33	-1.8
1,368,150	-		CCNA_01242	0.34	+0.5
1,368,216	+		CCNA_01242	0.38	-1.2
1,368,216	+		CCNA_01242	0.38	-0.6
1,368,309	+		CCNA_01242	0.44	-0.5
1,368,318	-		CCNA_01242	0.45	+0.3
1,368,456	+		CCNA_01242	0.53	-2.1
1,368,474	+		CCNA_01242	0.54	-0.7
1,368,496	-		CCNA_01242	0.56	-0.8
1,368,501	-		CCNA_01242	0.56	+0.5
1,368,526	-		CCNA_01242	0.58	+0.3
1,368,547	+		CCNA_01242	0.59	+0.3
1,368,628	+		CCNA_01242	0.64	-0.4
1,368,636	-		CCNA_01242	0.64	-1.0
1,368,636	-		CCNA_01242	0.64	-1.0
1,368,723	-		CCNA_01242	0.70	-0.5
1,368,799	+		CCNA_01242	0.75	-0.7
1,368,815	-		CCNA_01242	0.76	-0.4
1,368,859	+		CCNA_01242	0.78	-1.7
1,368,867	-		CCNA_01242	0.79	-0.3
1,368,867	-		CCNA_01242	0.79	-2.3
1,368,873	+		CCNA_01242	0.79	-1.5
1,368,918	+		CCNA_01242	0.82	-2.1
1,368,919	-		CCNA_01242	0.82	-0.3
1,368,951	+		CCNA_01242	0.84	-1.5
1,368,954	+		CCNA_01242	0.84	-1.4
1,368,954	-		CCNA_01242	0.84	-0.3
1,368,961	+		CCNA_01242	0.85	-0.6
1,368,964	-		CCNA_01242	0.85	-0.7
1,368,969	-		CCNA_01242	0.85	-1.1
1,369,032	-		CCNA_01242	0.89	-1.9
1,369,109	-				-1.2
1,369,123	-				-3.1
1,369,126	+				-1.0
1,369,134	-				-1.4
1,369,134	-				+0.4
1,369,191	+				-1.9
1,369,199	-				-0.7
1,369,238	-				+0.2
1,369,247	-				+0.1
1,369,253	-				-0.6
1,369,270	-				-0.3
1,369,275	-				-1.2
1,369,280	+				-0.5
1,369,288	-				-0.4
1,369,295	-				+1.0
1,369,321	+				+0.1
1,369,335	-				+0.7
1,369,335	-				-0.4
1,369,335	-				-1.0
1,369,335	-				+1.8
1,369,345	+				+0.2
1,369,345	+				-0.1
1,369,353	-				-1.7
1,369,358	-				-0.2
1,369,402	-				-2.4
1,369,402	-				+0.8
1,369,419	+				+1.4
1,369,445	-				-1.5
1,369,472	-				+0.4
1,369,477	+				+1.3
1,369,589	+		CCNA_01243	0.12	-0.1
1,369,621	-		CCNA_01243	0.13	-1.2
1,369,670	+		CCNA_01243	0.15	-0.2
1,369,699	+		CCNA_01243	0.16	+1.0
1,369,714	+		CCNA_01243	0.17	+0.6
1,369,725	+		CCNA_01243	0.17	-0.6
1,369,725	+		CCNA_01243	0.17	-0.5
1,369,725	+		CCNA_01243	0.17	+0.4
1,369,725	+		CCNA_01243	0.17	+0.8
1,369,725	+		CCNA_01243	0.17	+0.5
1,369,725	+		CCNA_01243	0.17	+0.6
1,369,725	+		CCNA_01243	0.17	-0.6
1,369,725	+		CCNA_01243	0.17	+0.3
1,369,725	+		CCNA_01243	0.17	-0.3
1,369,731	+		CCNA_01243	0.17	+0.5
1,369,733	-		CCNA_01243	0.17	-1.0
1,369,733	-		CCNA_01243	0.17	-2.1
1,369,733	-		CCNA_01243	0.17	+0.1
1,369,747	+		CCNA_01243	0.18	-0.5
1,369,752	+		CCNA_01243	0.18	+0.6
1,369,752	+		CCNA_01243	0.18	+0.4
1,369,752	+		CCNA_01243	0.18	-0.3
1,369,752	+		CCNA_01243	0.18	-0.5
1,369,795	-		CCNA_01243	0.20	-0.3
1,369,860	+		CCNA_01243	0.23	+0.6
1,369,965	+		CCNA_01243	0.27	+1.5
1,369,966	+		CCNA_01243	0.27	+2.0
1,370,041	+		CCNA_01243	0.30	+0.6
1,370,056	+		CCNA_01243	0.31	+0.2
1,370,071	-		CCNA_01243	0.31	-0.1
1,370,088	+		CCNA_01243	0.32	+0.2
1,370,096	-		CCNA_01243	0.32	-0.1
1,370,141	+		CCNA_01243	0.34	-0.2
1,370,141	-		CCNA_01243	0.34	+0.4
1,370,158	+		CCNA_01243	0.35	+0.6
1,370,178	+		CCNA_01243	0.35	+0.2
1,370,181	-		CCNA_01243	0.36	-0.5
1,370,202	+		CCNA_01243	0.36	+0.1
1,370,202	+		CCNA_01243	0.36	+2.3