Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01123

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,226,771	+		CCNA_01122	0.41	+0.3
1,226,794	+		CCNA_01122	0.43	+0.4
1,226,826	-		CCNA_01122	0.45	-0.8
1,226,834	+		CCNA_01122	0.45	+0.1
1,226,842	-		CCNA_01122	0.46	-0.0
1,226,872	-		CCNA_01122	0.48	+0.4
1,226,900	+		CCNA_01122	0.49	-0.3
1,226,900	+		CCNA_01122	0.49	-0.3
1,226,905	+		CCNA_01122	0.50	+0.4
1,226,908	-		CCNA_01122	0.50	+0.0
1,226,908	-		CCNA_01122	0.50	-0.0
1,226,910	+		CCNA_01122	0.50	+0.2
1,226,918	-		CCNA_01122	0.51	-2.2
1,226,918	-		CCNA_01122	0.51	-0.2
1,226,923	+		CCNA_01122	0.51	+0.8
1,227,027	+		CCNA_01122	0.58	-0.2
1,227,118	+		CCNA_01122	0.64	+1.2
1,227,126	-		CCNA_01122	0.64	-3.1
1,227,126	-		CCNA_01122	0.64	+0.9
1,227,181	+		CCNA_01122	0.68	-0.0
1,227,181	+		CCNA_01122	0.68	+0.4
1,227,187	+		CCNA_01122	0.68	-0.4
1,227,187	+		CCNA_01122	0.68	-0.5
1,227,196	-		CCNA_01122	0.69	+0.7
1,227,196	-		CCNA_01122	0.69	-0.7
1,227,219	-		CCNA_01122	0.70	-0.4
1,227,257	-		CCNA_01122	0.73	-0.2
1,227,274	+		CCNA_01122	0.74	-0.2
1,227,274	+		CCNA_01122	0.74	+0.5
1,227,277	-		CCNA_01122	0.74	-0.5
1,227,277	-		CCNA_01122	0.74	+1.0
1,227,277	-		CCNA_01122	0.74	-1.0
1,227,282	-		CCNA_01122	0.74	-0.0
1,227,282	-		CCNA_01122	0.74	+1.2
1,227,306	+		CCNA_01122	0.76	+2.4
1,227,314	-		CCNA_01122	0.76	-0.7
1,227,314	-		CCNA_01122	0.76	+1.1
1,227,328	+		CCNA_01122	0.77	+0.2
1,227,336	-		CCNA_01122	0.78	+0.0
1,227,383	+		CCNA_01122	0.81	+0.9
1,227,394	-		CCNA_01122	0.82	-1.7
1,227,439	+		CCNA_01122	0.85	+0.5
1,227,439	+		CCNA_01122	0.85	-0.9
1,227,447	-		CCNA_01122	0.85	-0.8
1,227,452	-		CCNA_01122	0.85	-1.4
1,227,459	+		CCNA_01122	0.86	+1.0
1,227,459	-		CCNA_01122	0.86	-0.3
1,227,459	-		CCNA_01122	0.86	-1.5
1,227,466	+		CCNA_01122	0.86	+0.5
1,227,469	-		CCNA_01122	0.86	-0.1
1,227,488	-		CCNA_01122	0.88	+0.2
1,227,491	+		CCNA_01122	0.88	+0.1
1,227,498	+		CCNA_01122	0.88	+0.0
1,227,498	+		CCNA_01122	0.88	+0.3
1,227,498	+		CCNA_01122	0.88	+0.5
1,227,498	+		CCNA_01122	0.88	+0.5
1,227,508	+		CCNA_01122	0.89	-0.4
1,227,515	+		CCNA_01122	0.89	+0.1
1,227,558	-				-2.1
1,227,570	+				+0.1
1,227,580	+				-0.4
1,227,580	+				+0.3
1,227,580	+				+0.3
1,227,580	+				+0.1
1,227,580	+				+0.0
1,227,580	+				-0.0
1,227,581	+				+0.3
1,227,588	-				-1.3
1,227,588	-				-1.7
1,227,588	-				-0.2
1,227,588	-				-0.7
1,227,589	-				-1.2
1,227,653	-				+0.2
1,227,680	-				-0.4
1,227,681	+				+0.4
1,227,685	-				+0.1
1,227,692	-				-0.0
1,227,699	-				+0.8
1,227,714	+				+0.8
1,227,754	-				-1.4
1,227,868	-		CCNA_01123	0.11	-1.7
1,227,911	-		CCNA_01123	0.14	+0.8
1,227,939	+		CCNA_01123	0.16	+0.2
1,227,982	+		CCNA_01123	0.18	+1.2
1,228,051	+		CCNA_01123	0.23	-2.4
1,228,051	+		CCNA_01123	0.23	+0.8
1,228,051	+		CCNA_01123	0.23	-1.1
1,228,051	+		CCNA_01123	0.23	-0.8
1,228,051	+		CCNA_01123	0.23	-0.4
1,228,051	+		CCNA_01123	0.23	+0.3
1,228,051	+		CCNA_01123	0.23	-0.7
1,228,051	+		CCNA_01123	0.23	+0.8
1,228,051	-		CCNA_01123	0.23	-1.7
1,228,059	-		CCNA_01123	0.23	-0.2
1,228,059	-		CCNA_01123	0.23	-0.8
1,228,059	-		CCNA_01123	0.23	-1.0
1,228,059	-		CCNA_01123	0.23	-1.9
1,228,061	+		CCNA_01123	0.23	-0.9
1,228,068	-		CCNA_01123	0.24	-2.0
1,228,069	-		CCNA_01123	0.24	+0.6
1,228,159	+		CCNA_01123	0.29	-0.9
1,228,167	-		CCNA_01123	0.30	-0.2
1,228,179	-		CCNA_01123	0.31	-0.0
1,228,185	+		CCNA_01123	0.31	-0.2
1,228,185	+		CCNA_01123	0.31	-1.8
1,228,185	+		CCNA_01123	0.31	+0.4
1,228,185	+		CCNA_01123	0.31	-1.1
1,228,193	-		CCNA_01123	0.32	-0.3
1,228,193	-		CCNA_01123	0.32	-1.4
1,228,193	-		CCNA_01123	0.32	-0.4
1,228,198	-		CCNA_01123	0.32	+0.8
1,228,217	+		CCNA_01123	0.33	-2.2
1,228,225	-		CCNA_01123	0.34	-0.5
1,228,225	-		CCNA_01123	0.34	-0.5
1,228,225	-		CCNA_01123	0.34	-2.1
1,228,292	-		CCNA_01123	0.38	-0.1
1,228,309	-		CCNA_01123	0.39	-0.3
1,228,340	+		CCNA_01123	0.41	-1.1
1,228,457	-		CCNA_01123	0.48	-0.6
1,228,459	+		CCNA_01123	0.48	+0.6
1,228,472	-		CCNA_01123	0.49	-2.2
1,228,564	+		CCNA_01123	0.55	-0.3
1,228,564	+		CCNA_01123	0.55	-0.4
1,228,564	+		CCNA_01123	0.55	+0.5
1,228,619	+		CCNA_01123	0.58	+0.4
1,228,619	-		CCNA_01123	0.58	+0.5
1,228,624	+		CCNA_01123	0.58	-1.7
1,228,624	+		CCNA_01123	0.58	-0.3
1,228,684	+		CCNA_01123	0.62	+0.8
1,228,684	+		CCNA_01123	0.62	+1.1
1,228,698	+		CCNA_01123	0.63	-0.1
1,228,723	-		CCNA_01123	0.65	-0.6
1,228,723	-		CCNA_01123	0.65	-1.0
1,228,723	-		CCNA_01123	0.65	+1.5
1,228,774	-		CCNA_01123	0.68	-2.6
1,228,828	+		CCNA_01123	0.71	+0.5
1,228,846	-		CCNA_01123	0.72	-0.5
1,228,871	+		CCNA_01123	0.74	-0.9
1,228,890	+		CCNA_01123	0.75	-0.7
1,228,898	-		CCNA_01123	0.75	+0.8
1,228,942	-		CCNA_01123	0.78	-0.8
1,228,977	+		CCNA_01123	0.80	+0.1
1,229,044	-		CCNA_01123	0.85	+0.7
1,229,068	-		CCNA_01123	0.86	-1.8
1,229,178	+				+0.5
1,229,186	-				+0.8
1,229,218	-				+0.8
1,229,272	-				-1.3
1,229,321	-				+0.9
1,229,340	+				+0.1
1,229,414	-				+0.8
1,229,436	-				-0.0
1,229,445	+		CCNA_01124	0.10	+0.7
1,229,447	+		CCNA_01124	0.10	-0.3
1,229,476	+		CCNA_01124	0.13	-0.5
1,229,484	-		CCNA_01124	0.14	+0.0
1,229,484	-		CCNA_01124	0.14	+0.8
1,229,506	+		CCNA_01124	0.16	-0.1
1,229,600	-		CCNA_01124	0.25	-0.1
1,229,633	-		CCNA_01124	0.28	+0.1
1,229,686	-		CCNA_01124	0.33	+0.1
1,229,732	+		CCNA_01124	0.38	+0.6
1,229,746	+		CCNA_01124	0.39	+0.4
1,229,773	-		CCNA_01124	0.41	+0.2
1,229,845	+		CCNA_01124	0.48	+0.2
1,229,853	-		CCNA_01124	0.49	+0.4
1,229,853	-		CCNA_01124	0.49	+0.2
1,229,864	+		CCNA_01124	0.50	-0.8
1,229,872	-		CCNA_01124	0.51	-0.6
1,229,872	-		CCNA_01124	0.51	+0.4
1,229,872	-		CCNA_01124	0.51	-0.5
1,229,873	-		CCNA_01124	0.51	-0.8
1,229,891	+		CCNA_01124	0.53	-0.5
1,229,899	-		CCNA_01124	0.54	-0.8
1,229,899	-		CCNA_01124	0.54	-0.8
1,229,913	-		CCNA_01124	0.55	+0.5
1,229,947	+		CCNA_01124	0.58	-0.5
1,230,003	+		CCNA_01124	0.64	+0.6
1,230,013	+		CCNA_01124	0.64	-1.1
1,230,043	+		CCNA_01124	0.67	-0.9
1,230,051	-		CCNA_01124	0.68	-0.9
1,230,096	-		CCNA_01124	0.72	-1.4
1,230,110	-		CCNA_01124	0.74	-0.7
1,230,153	+		CCNA_01124	0.78	+1.1
1,230,174	+		CCNA_01124	0.80	+0.8
1,230,182	-		CCNA_01124	0.81	+0.5
1,230,182	-		CCNA_01124	0.81	+0.8
1,230,182	-		CCNA_01124	0.81	-0.7
1,230,182	-		CCNA_01124	0.81	+0.3
1,230,186	+		CCNA_01124	0.81	+0.6
1,230,210	+		CCNA_01124	0.83	-0.1
1,230,220	+		CCNA_01124	0.84	+0.0
1,230,253	+		CCNA_01124	0.87	-0.2
1,230,253	+		CCNA_01124	0.87	-0.3
1,230,267	-		CCNA_01124	0.89	-0.7
1,230,272	-		CCNA_01124	0.89	-0.7
1,230,290	+				-0.3
1,230,290	+				-0.4
1,230,290	+				+0.0