Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01121

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,223,572	+				-0.5
1,223,582	+				-1.1
1,223,590	-				+0.1
1,223,598	+				+0.4
1,223,631	+				+0.5
1,223,631	+				+0.3
1,223,639	-				-0.7
1,223,685	+				+0.6
1,223,685	+				+0.3
1,223,685	+				-0.7
1,223,685	+				-0.4
1,223,685	+				+0.3
1,223,693	-				+0.5
1,223,693	-				+0.5
1,223,693	-				-0.2
1,223,693	-				-0.8
1,223,703	-				+0.6
1,223,705	-				-0.4
1,223,705	-				+1.8
1,223,739	-				-1.2
1,223,754	-				-0.0
1,223,754	-				-1.7
1,223,754	-				-0.6
1,223,817	-		CCNA_01119	0.25	-1.2
1,223,822	+		CCNA_01119	0.26	-1.2
1,223,835	-		CCNA_01119	0.30	-0.1
1,223,844	+		CCNA_01119	0.32	+0.8
1,223,846	+		CCNA_01119	0.33	-1.0
1,223,847	-		CCNA_01119	0.33	+0.5
1,223,894	-		CCNA_01119	0.45	-2.2
1,223,894	-		CCNA_01119	0.45	+0.8
1,223,910	-		CCNA_01119	0.49	-1.4
1,223,915	-		CCNA_01119	0.51	-0.0
1,223,921	+		CCNA_01119	0.52	+1.8
1,223,931	-		CCNA_01119	0.55	-1.3
1,223,938	+		CCNA_01119	0.57	+0.1
1,223,938	+		CCNA_01119	0.57	+0.6
1,223,943	+		CCNA_01119	0.58	+0.3
1,223,945	+		CCNA_01119	0.59	-0.0
1,223,959	-		CCNA_01119	0.62	-1.3
1,224,005	+		CCNA_01119	0.74	-0.5
1,224,014	-		CCNA_01119	0.77	+0.1
1,224,062	-		CCNA_01119	0.89	-0.1
1,224,097	+				+0.6
1,224,106	-				-0.6
1,224,126	-				-0.0
1,224,135	+				-0.3
1,224,153	+				-1.8
1,224,219	-		CCNA_01120	0.22	-0.8
1,224,219	-		CCNA_01120	0.22	-1.8
1,224,266	-		CCNA_01120	0.58	-0.2
1,224,267	-		CCNA_01120	0.58	-0.5
1,224,432	-				-1.0
1,224,457	+				+0.3
1,224,504	-				+0.8
1,224,540	-				-0.7
1,224,544	+				+0.1
1,224,544	+				-0.5
1,224,552	-				-1.4
1,224,570	+				-0.5
1,224,574	+				-0.3
1,224,589	+				+0.3
1,224,600	+				-0.4
1,224,613	+				-0.0
1,224,622	+				+1.1
1,224,623	-				-0.5
1,224,624	+				-0.1
1,224,637	+				-0.6
1,224,669	+		CCNA_01121	0.12	-0.1
1,224,670	+		CCNA_01121	0.12	-0.3
1,224,676	-		CCNA_01121	0.12	-1.4
1,224,677	-		CCNA_01121	0.12	-0.1
1,224,723	+		CCNA_01121	0.15	+0.6
1,224,731	-		CCNA_01121	0.16	+0.9
1,224,757	-		CCNA_01121	0.17	-0.0
1,224,769	+		CCNA_01121	0.18	-0.8
1,224,813	+		CCNA_01121	0.21	+0.4
1,224,819	-		CCNA_01121	0.22	+0.2
1,224,821	-		CCNA_01121	0.22	-1.2
1,224,861	+		CCNA_01121	0.24	-1.7
1,224,861	+		CCNA_01121	0.24	-0.1
1,224,871	-		CCNA_01121	0.25	+1.5
1,224,909	-		CCNA_01121	0.27	+0.7
1,224,916	+		CCNA_01121	0.28	-0.2
1,224,921	+		CCNA_01121	0.28	-0.9
1,224,924	-		CCNA_01121	0.28	+0.7
1,224,924	-		CCNA_01121	0.28	-0.4
1,224,952	+		CCNA_01121	0.30	-0.4
1,224,957	+		CCNA_01121	0.31	-0.3
1,224,958	+		CCNA_01121	0.31	+0.1
1,224,964	+		CCNA_01121	0.31	+0.8
1,224,965	-		CCNA_01121	0.31	-1.6
1,224,970	-		CCNA_01121	0.31	-1.2
1,224,972	-		CCNA_01121	0.32	-0.0
1,225,017	+		CCNA_01121	0.35	-0.5
1,225,025	-		CCNA_01121	0.35	-1.2
1,225,030	-		CCNA_01121	0.35	-0.8
1,225,042	+		CCNA_01121	0.36	-0.2
1,225,044	+		CCNA_01121	0.36	+2.2
1,225,055	+		CCNA_01121	0.37	+0.2
1,225,060	-		CCNA_01121	0.37	-0.2
1,225,060	-		CCNA_01121	0.37	+1.0
1,225,060	-		CCNA_01121	0.37	-0.9
1,225,060	-		CCNA_01121	0.37	+0.5
1,225,083	-		CCNA_01121	0.39	+0.0
1,225,091	+		CCNA_01121	0.39	+0.1
1,225,134	+		CCNA_01121	0.42	+0.7
1,225,134	+		CCNA_01121	0.42	+1.6
1,225,137	-		CCNA_01121	0.43	-0.1
1,225,137	-		CCNA_01121	0.43	-0.2
1,225,142	-		CCNA_01121	0.43	-0.4
1,225,142	-		CCNA_01121	0.43	+0.1
1,225,151	+		CCNA_01121	0.43	-1.2
1,225,239	+		CCNA_01121	0.49	+0.0
1,225,245	+		CCNA_01121	0.50	-0.2
1,225,291	+		CCNA_01121	0.53	+0.0
1,225,336	+		CCNA_01121	0.56	+0.2
1,225,346	+		CCNA_01121	0.56	+0.1
1,225,353	+		CCNA_01121	0.57	+0.0
1,225,354	-		CCNA_01121	0.57	+0.7
1,225,355	-		CCNA_01121	0.57	-0.2
1,225,356	+		CCNA_01121	0.57	+0.4
1,225,356	+		CCNA_01121	0.57	+0.3
1,225,446	+		CCNA_01121	0.63	+0.2
1,225,454	-		CCNA_01121	0.63	-0.1
1,225,454	-		CCNA_01121	0.63	-1.1
1,225,454	-		CCNA_01121	0.63	+1.5
1,225,454	-		CCNA_01121	0.63	-0.1
1,225,469	-		CCNA_01121	0.64	-0.5
1,225,504	+		CCNA_01121	0.67	+0.1
1,225,507	-		CCNA_01121	0.67	-0.0
1,225,519	-		CCNA_01121	0.68	-1.0
1,225,625	-		CCNA_01121	0.75	-0.3
1,225,675	-		CCNA_01121	0.78	-0.2
1,225,685	-		CCNA_01121	0.79	+0.9
1,225,727	+		CCNA_01121	0.81	-1.1
1,225,735	-		CCNA_01121	0.82	-1.0
1,225,737	+		CCNA_01121	0.82	+0.1
1,225,738	+		CCNA_01121	0.82	-0.1
1,225,738	+		CCNA_01121	0.82	+1.2
1,225,738	+		CCNA_01121	0.82	-0.1
1,225,738	+		CCNA_01121	0.82	+0.3
1,225,738	+		CCNA_01121	0.82	-0.4
1,225,738	-		CCNA_01121	0.82	-0.9
1,225,740	+		CCNA_01121	0.82	+0.2
1,225,746	-		CCNA_01121	0.83	-0.5
1,225,746	-		CCNA_01121	0.83	-0.0
1,225,746	-		CCNA_01121	0.83	+0.5
1,225,746	-		CCNA_01121	0.83	+1.6
1,225,760	+		CCNA_01121	0.84	+0.8
1,225,800	+		CCNA_01121	0.86	-0.4
1,225,822	-		CCNA_01121	0.88	-0.4
1,225,890	-				-0.4
1,225,912	-				+0.2
1,225,926	-				-0.0
1,225,965	+				+0.2
1,225,965	+				+0.4
1,225,965	+				-0.5
1,225,973	-				-2.5
1,225,973	-				-0.8
1,225,975	+				+0.1
1,225,975	+				-0.3
1,225,975	+				-0.8
1,225,983	-				-1.4
1,225,983	-				-0.9
1,225,983	-				-1.1
1,226,084	+				+1.1
1,226,092	-				-0.8
1,226,122	+				+0.5
1,226,130	-				-1.0
1,226,130	-				-0.2
1,226,154	-				-0.9
1,226,195	+				-0.0
1,226,195	+				+0.2
1,226,210	+				+1.2
1,226,210	+				+0.5
1,226,235	+				+0.5
1,226,338	+		CCNA_01122	0.13	+0.1
1,226,346	-		CCNA_01122	0.13	-0.7
1,226,364	-		CCNA_01122	0.15	-0.5
1,226,365	+		CCNA_01122	0.15	-0.1
1,226,390	+		CCNA_01122	0.16	+0.1
1,226,441	-		CCNA_01122	0.20	-0.4
1,226,453	+		CCNA_01122	0.20	+0.1
1,226,461	-		CCNA_01122	0.21	+0.2
1,226,463	+		CCNA_01122	0.21	-0.5
1,226,487	-		CCNA_01122	0.23	+0.0
1,226,497	-		CCNA_01122	0.23	-0.5
1,226,497	-		CCNA_01122	0.23	-0.2
1,226,553	+		CCNA_01122	0.27	-0.7
1,226,553	+		CCNA_01122	0.27	-0.4
1,226,554	-		CCNA_01122	0.27	-1.1
1,226,579	-		CCNA_01122	0.29	+0.2
1,226,600	-		CCNA_01122	0.30	-0.3
1,226,605	-		CCNA_01122	0.30	+0.2
1,226,636	+		CCNA_01122	0.32	+0.5
1,226,641	+		CCNA_01122	0.33	+0.1
1,226,654	-		CCNA_01122	0.33	-0.1
1,226,771	+		CCNA_01122	0.41	+0.3
1,226,794	+		CCNA_01122	0.43	+0.4
1,226,826	-		CCNA_01122	0.45	-0.8
1,226,834	+		CCNA_01122	0.45	+0.1
1,226,842	-		CCNA_01122	0.46	-0.0
1,226,872	-		CCNA_01122	0.48	+0.4
1,226,900	+		CCNA_01122	0.49	-0.3
1,226,900	+		CCNA_01122	0.49	-0.3
1,226,905	+		CCNA_01122	0.50	+0.4
1,226,908	-		CCNA_01122	0.50	+0.0
1,226,908	-		CCNA_01122	0.50	-0.0
1,226,910	+		CCNA_01122	0.50	+0.2
1,226,918	-		CCNA_01122	0.51	-2.2
1,226,918	-		CCNA_01122	0.51	-0.2
1,226,923	+		CCNA_01122	0.51	+0.8