Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01103

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,208,073	+				-2.0
1,208,073	+				-0.0
1,208,073	+				+0.1
1,208,073	+				-1.1
1,208,142	-				+0.0
1,208,145	+				-0.8
1,208,193	-				+0.6
1,208,251	+				-0.4
1,208,277	-		CCNA_01102	0.10	-0.0
1,208,289	+		CCNA_01102	0.12	-1.7
1,208,290	+		CCNA_01102	0.12	-0.0
1,208,294	+		CCNA_01102	0.13	-0.1
1,208,298	-		CCNA_01102	0.14	-0.4
1,208,300	+		CCNA_01102	0.14	-0.1
1,208,308	-		CCNA_01102	0.15	+0.2
1,208,332	+		CCNA_01102	0.19	+0.2
1,208,343	+		CCNA_01102	0.21	+0.3
1,208,351	-		CCNA_01102	0.22	-0.0
1,208,351	-		CCNA_01102	0.22	+1.2
1,208,351	-		CCNA_01102	0.22	-1.8
1,208,351	-		CCNA_01102	0.22	+0.1
1,208,361	-		CCNA_01102	0.24	-0.2
1,208,375	+		CCNA_01102	0.26	+0.0
1,208,394	+		CCNA_01102	0.29	+0.5
1,208,394	+		CCNA_01102	0.29	+0.1
1,208,416	-		CCNA_01102	0.33	+0.4
1,208,431	+		CCNA_01102	0.36	-0.0
1,208,449	-		CCNA_01102	0.39	+0.8
1,208,484	+		CCNA_01102	0.45	-1.1
1,208,489	+		CCNA_01102	0.45	+0.7
1,208,489	+		CCNA_01102	0.45	+1.7
1,208,489	+		CCNA_01102	0.45	+0.2
1,208,489	+		CCNA_01102	0.45	-0.3
1,208,489	+		CCNA_01102	0.45	-0.1
1,208,497	-		CCNA_01102	0.47	+0.6
1,208,497	-		CCNA_01102	0.47	-0.0
1,208,499	+		CCNA_01102	0.47	-0.4
1,208,509	+		CCNA_01102	0.49	+1.5
1,208,509	+		CCNA_01102	0.49	-0.8
1,208,517	-		CCNA_01102	0.50	+0.1
1,208,517	-		CCNA_01102	0.50	-0.9
1,208,517	-		CCNA_01102	0.50	-2.3
1,208,524	+		CCNA_01102	0.51	-0.0
1,208,597	+		CCNA_01102	0.63	-0.6
1,208,607	-		CCNA_01102	0.65	-0.8
1,208,615	+		CCNA_01102	0.66	+0.8
1,208,623	-		CCNA_01102	0.68	-0.3
1,208,623	-		CCNA_01102	0.68	+0.2
1,208,635	+		CCNA_01102	0.70	-1.4
1,208,643	-		CCNA_01102	0.71	-0.2
1,208,643	-		CCNA_01102	0.71	+0.2
1,208,645	-		CCNA_01102	0.71	-1.3
1,208,647	+		CCNA_01102	0.72	-1.2
1,208,675	+		CCNA_01102	0.76	+0.2
1,208,677	-		CCNA_01102	0.77	-0.2
1,208,694	+		CCNA_01102	0.80	+0.6
1,208,731	+		CCNA_01102	0.86	+0.2
1,208,731	+		CCNA_01102	0.86	+1.5
1,208,739	-		CCNA_01102	0.87	+0.8
1,208,774	+				+0.2
1,208,786	+				+0.6
1,208,794	-				-0.2
1,208,794	-				-0.3
1,208,794	-				-0.3
1,208,818	-				-0.3
1,208,818	-				-0.4
1,208,818	-				-0.9
1,208,830	+				+0.8
1,208,833	+				+0.2
1,208,877	+				-0.4
1,208,898	+				-0.4
1,208,906	-				+0.4
1,208,906	-				+0.4
1,208,943	+				-0.7
1,209,019	-				-0.0
1,209,032	-				+0.5
1,209,052	-				-0.2
1,209,056	-				-0.2
1,209,069	+				+0.5
1,209,101	-		CCNA_01103	0.13	-1.0
1,209,172	-		CCNA_01103	0.21	-1.0
1,209,307	-		CCNA_01103	0.34	-0.9
1,209,307	-		CCNA_01103	0.34	-0.2
1,209,307	-		CCNA_01103	0.34	-1.3
1,209,307	-		CCNA_01103	0.34	-0.0
1,209,307	-		CCNA_01103	0.34	-0.9
1,209,312	+		CCNA_01103	0.35	-0.4
1,209,312	+		CCNA_01103	0.35	-1.3
1,209,312	-		CCNA_01103	0.35	-0.4
1,209,314	-		CCNA_01103	0.35	-0.2
1,209,320	-		CCNA_01103	0.36	-0.7
1,209,326	+		CCNA_01103	0.36	+0.5
1,209,327	-		CCNA_01103	0.37	-0.4
1,209,359	-		CCNA_01103	0.40	-0.4
1,209,359	-		CCNA_01103	0.40	-0.4
1,209,381	-		CCNA_01103	0.42	-0.2
1,209,450	-		CCNA_01103	0.49	+0.3
1,209,467	-		CCNA_01103	0.51	+1.2
1,209,510	+		CCNA_01103	0.55	+0.8
1,209,515	+		CCNA_01103	0.56	-1.1
1,209,518	-		CCNA_01103	0.56	+0.2
1,209,523	-		CCNA_01103	0.57	-1.7
1,209,547	+		CCNA_01103	0.59	+0.5
1,209,547	+		CCNA_01103	0.59	-0.2
1,209,555	-		CCNA_01103	0.60	-2.1
1,209,555	-		CCNA_01103	0.60	-0.5
1,209,581	+		CCNA_01103	0.63	-0.7
1,209,602	-		CCNA_01103	0.65	-1.0
1,209,728	-		CCNA_01103	0.78	+0.2
1,209,734	-		CCNA_01103	0.78	+0.2
1,209,779	-		CCNA_01103	0.83	-0.5
1,209,791	-		CCNA_01103	0.84	+0.5
1,209,791	-		CCNA_01103	0.84	-0.9
1,209,824	-		CCNA_01103	0.88	+0.5
1,209,831	+		CCNA_01103	0.88	-0.0
1,209,834	-		CCNA_01103	0.89	-0.0
1,209,845	-		CCNA_01103	0.90	-0.3
1,209,881	-				-1.8
1,209,915	+				-0.1
1,209,923	-				+0.4
1,209,959	+				+0.8
1,209,967	-				+0.8