Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01086

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,190,325	-		CCNA_01085	0.22	-0.4
1,190,325	-		CCNA_01085	0.22	+1.0
1,190,325	-		CCNA_01085	0.22	-0.6
1,190,580	-		CCNA_01085	0.47	-0.9
1,190,581	+		CCNA_01085	0.47	+0.5
1,190,657	-		CCNA_01085	0.55	+0.4
1,190,679	+		CCNA_01085	0.57	+1.2
1,190,780	+		CCNA_01085	0.67	-0.6
1,190,808	+		CCNA_01085	0.70	-0.8
1,190,811	-		CCNA_01085	0.70	-0.2
1,190,893	+		CCNA_01085	0.78	+0.5
1,190,901	-		CCNA_01085	0.79	+0.4
1,190,997	-		CCNA_01085	0.88	-0.6
1,191,051	-				-0.2
1,191,087	+				-1.5
1,191,139	-				+0.9
1,191,139	-				+0.0
1,191,165	-				+0.6
1,191,210	+				-1.8
1,191,284	+				-0.2
1,191,318	+				-1.2
1,191,351	+				-1.5
1,191,401	+				-0.3
1,191,435	+				-1.2
1,191,458	+				+1.2
1,191,468	+				-2.0
1,191,530	+		CCNA_01086	0.12	-0.7
1,191,558	-		CCNA_01086	0.14	-0.4
1,191,606	+		CCNA_01086	0.17	-0.4
1,191,614	-		CCNA_01086	0.17	-1.9
1,191,614	-		CCNA_01086	0.17	-0.6
1,191,614	-		CCNA_01086	0.17	-0.4
1,191,701	+		CCNA_01086	0.22	-0.2
1,191,774	-		CCNA_01086	0.26	-0.4
1,191,812	-		CCNA_01086	0.28	-0.2
1,191,868	-		CCNA_01086	0.31	-0.4
1,191,896	-		CCNA_01086	0.33	-0.5
1,191,929	-		CCNA_01086	0.34	-1.4
1,191,944	+		CCNA_01086	0.35	-1.5
1,191,949	+		CCNA_01086	0.36	-1.5
1,191,973	+		CCNA_01086	0.37	+0.6
1,191,981	-		CCNA_01086	0.37	+0.5
1,192,102	-		CCNA_01086	0.44	-1.4
1,192,112	-		CCNA_01086	0.45	-0.4
1,192,137	+		CCNA_01086	0.46	-0.0
1,192,206	+		CCNA_01086	0.50	+0.9
1,192,214	-		CCNA_01086	0.50	-0.3
1,192,238	-		CCNA_01086	0.52	-0.6
1,192,249	-		CCNA_01086	0.52	+1.1
1,192,308	+		CCNA_01086	0.55	-1.0
1,192,425	+		CCNA_01086	0.62	-0.8
1,192,443	+		CCNA_01086	0.63	+1.0
1,192,523	+		CCNA_01086	0.67	-1.4
1,192,533	+		CCNA_01086	0.68	-0.9
1,192,545	+		CCNA_01086	0.69	-1.1
1,192,584	+		CCNA_01086	0.71	-0.0
1,192,612	-		CCNA_01086	0.72	+0.3
1,192,612	-		CCNA_01086	0.72	+0.4
1,192,645	-		CCNA_01086	0.74	-0.6
1,192,696	+		CCNA_01086	0.77	-0.3
1,192,752	+		CCNA_01086	0.80	+0.0
1,192,760	-		CCNA_01086	0.80	-0.6
1,192,764	+		CCNA_01086	0.81	+0.2
1,192,770	-		CCNA_01086	0.81	-0.5
1,192,771	-		CCNA_01086	0.81	-0.5
1,192,771	-		CCNA_01086	0.81	-0.6
1,192,771	-		CCNA_01086	0.81	+1.1
1,192,810	-		CCNA_01086	0.83	-1.1
1,192,830	+		CCNA_01086	0.84	-1.0
1,192,858	+		CCNA_01086	0.86	-0.9
1,192,926	+		CCNA_01086	0.90	-0.0
1,192,964	-				+0.2
1,192,986	-				-0.3
1,193,093	+				-0.7
1,193,101	-				-0.5
1,193,138	-				-0.1
1,193,160	+				+0.4
1,193,182	+				+0.7
1,193,197	-				+0.1
1,193,273	+				+0.4
1,193,276	-				-0.5
1,193,291	-				-0.8
1,193,303	+				+0.4
1,193,317	-				+0.3
1,193,318	-				-0.1
1,193,386	+		CCNA_01087	0.15	+0.5
1,193,438	-		CCNA_01087	0.23	+0.4
1,193,452	+		CCNA_01087	0.25	+1.2
1,193,452	+		CCNA_01087	0.25	+0.3
1,193,490	+		CCNA_01087	0.30	+0.0
1,193,498	-		CCNA_01087	0.31	-0.7
1,193,507	+		CCNA_01087	0.32	+1.3
1,193,507	+		CCNA_01087	0.32	+0.9
1,193,514	-		CCNA_01087	0.33	-1.2
1,193,528	+		CCNA_01087	0.35	+0.2
1,193,614	-		CCNA_01087	0.47	-1.2
1,193,626	-		CCNA_01087	0.49	+0.6
1,193,669	-		CCNA_01087	0.55	-0.0
1,193,669	-		CCNA_01087	0.55	+0.3
1,193,695	+		CCNA_01087	0.58	+0.8
1,193,697	-		CCNA_01087	0.59	+0.0
1,193,725	-		CCNA_01087	0.63	-0.5
1,193,752	-		CCNA_01087	0.66	-0.1
1,193,753	-		CCNA_01087	0.67	-0.3
1,193,753	-		CCNA_01087	0.67	-0.8
1,193,775	+		CCNA_01087	0.70	+0.1
1,193,775	+		CCNA_01087	0.70	+0.4
1,193,781	-		CCNA_01087	0.70	-1.1
1,193,785	+		CCNA_01087	0.71	-0.0
1,193,802	+		CCNA_01087	0.73	+0.8
1,193,805	-		CCNA_01087	0.74	+0.0
1,193,839	+		CCNA_01087	0.79	-0.5
1,193,842	-		CCNA_01087	0.79	-1.4
1,193,852	-		CCNA_01087	0.80	+1.7
1,193,900	-		CCNA_01087	0.87	-0.2
1,193,906	-		CCNA_01087	0.88	-0.7
1,193,925	+				-0.4
1,193,937	+				+0.2
1,193,964	-				+1.0
1,193,986	+				+0.9
1,193,993	+				+0.3
1,194,015	-				+0.5
1,194,017	+				-0.5
1,194,026	+				-0.5
1,194,026	-				-0.1
1,194,034	-				+0.3
1,194,113	+		CCNA_01088	0.16	+0.3