Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01068

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,171,862	+		CCNA_01067	0.45	-0.0
1,171,862	+		CCNA_01067	0.45	+0.0
1,171,862	+		CCNA_01067	0.45	-0.8
1,171,862	+		CCNA_01067	0.45	-0.2
1,171,870	-		CCNA_01067	0.45	-0.4
1,171,934	-		CCNA_01067	0.49	-1.2
1,171,972	-		CCNA_01067	0.52	-1.7
1,171,982	+		CCNA_01067	0.52	-1.5
1,171,990	-		CCNA_01067	0.53	-1.0
1,172,004	+		CCNA_01067	0.54	-0.1
1,172,016	+		CCNA_01067	0.55	+0.7
1,172,070	+		CCNA_01067	0.58	-0.7
1,172,092	-		CCNA_01067	0.59	-1.7
1,172,096	+		CCNA_01067	0.60	+2.4
1,172,207	+		CCNA_01067	0.67	-0.5
1,172,216	-		CCNA_01067	0.67	-2.6
1,172,219	+		CCNA_01067	0.67	+0.3
1,172,284	+		CCNA_01067	0.71	+0.6
1,172,284	+		CCNA_01067	0.71	-0.4
1,172,292	-		CCNA_01067	0.72	+1.8
1,172,445	-		CCNA_01067	0.82	+0.2
1,172,471	+		CCNA_01067	0.83	+0.5
1,172,479	-		CCNA_01067	0.84	+0.5
1,172,500	-		CCNA_01067	0.85	-0.9
1,172,502	+		CCNA_01067	0.85	+0.3
1,172,538	+		CCNA_01067	0.88	+0.4
1,172,711	+				+1.0
1,172,711	+				+0.2
1,172,719	-				+0.3
1,172,719	-				-0.5
1,172,740	-				+0.2
1,172,763	-				-1.2
1,172,770	+				+0.4
1,172,770	+				+0.4
1,172,778	-				+0.8
1,172,778	-				+0.6
1,172,778	-				-0.1
1,172,778	-				+0.3
1,172,794	+				+0.5
1,172,827	+				+0.8
1,172,870	+				+0.3
1,172,985	+		CCNA_01068	0.11	-0.3
1,172,985	+		CCNA_01068	0.11	+0.8
1,172,985	+		CCNA_01068	0.11	+0.8
1,172,985	+		CCNA_01068	0.11	-0.4
1,172,985	+		CCNA_01068	0.11	-0.3
1,172,990	+		CCNA_01068	0.12	+0.4
1,173,090	+		CCNA_01068	0.19	-0.2
1,173,108	+		CCNA_01068	0.21	-0.2
1,173,167	+		CCNA_01068	0.25	-0.9
1,173,186	-		CCNA_01068	0.27	+0.2
1,173,188	+		CCNA_01068	0.27	+0.5
1,173,188	+		CCNA_01068	0.27	-1.3
1,173,217	+		CCNA_01068	0.29	+0.1
1,173,217	+		CCNA_01068	0.29	-0.4
1,173,217	+		CCNA_01068	0.29	-0.0
1,173,217	+		CCNA_01068	0.29	-1.1
1,173,217	+		CCNA_01068	0.29	-0.7
1,173,225	-		CCNA_01068	0.30	-0.0
1,173,225	-		CCNA_01068	0.30	-1.0
1,173,244	-		CCNA_01068	0.31	-0.1
1,173,304	+		CCNA_01068	0.36	-0.1
1,173,304	+		CCNA_01068	0.36	+0.0
1,173,304	+		CCNA_01068	0.36	+0.4
1,173,338	+		CCNA_01068	0.39	+0.3
1,173,338	+		CCNA_01068	0.39	+0.2
1,173,346	-		CCNA_01068	0.39	-0.9
1,173,371	+		CCNA_01068	0.41	-0.3
1,173,379	-		CCNA_01068	0.42	-1.2
1,173,464	+		CCNA_01068	0.48	+0.8
1,173,464	+		CCNA_01068	0.48	-0.9
1,173,464	+		CCNA_01068	0.48	+0.8
1,173,497	+		CCNA_01068	0.51	-1.6
1,173,505	-		CCNA_01068	0.51	-1.1
1,173,523	+		CCNA_01068	0.53	-0.6
1,173,523	+		CCNA_01068	0.53	+0.2
1,173,524	+		CCNA_01068	0.53	+0.0
1,173,530	+		CCNA_01068	0.53	-0.9
1,173,530	+		CCNA_01068	0.53	-0.6
1,173,576	+		CCNA_01068	0.57	+0.5
1,173,576	+		CCNA_01068	0.57	-0.0
1,173,594	-		CCNA_01068	0.58	-1.1
1,173,613	-		CCNA_01068	0.60	-0.9
1,173,727	-		CCNA_01068	0.69	-2.1
1,173,789	+		CCNA_01068	0.73	-0.1
1,173,821	+		CCNA_01068	0.76	-1.0
1,173,836	+		CCNA_01068	0.77	-0.5
1,173,844	-		CCNA_01068	0.78	+0.0
1,173,851	+		CCNA_01068	0.78	+0.1
1,173,851	+		CCNA_01068	0.78	+1.1
1,173,859	-		CCNA_01068	0.79	+1.2
1,173,891	+		CCNA_01068	0.81	+1.8
1,173,899	-		CCNA_01068	0.82	-0.7
1,173,909	-		CCNA_01068	0.83	+0.2
1,173,936	+		CCNA_01068	0.85	-1.4
1,173,940	+		CCNA_01068	0.85	-0.6
1,174,005	-				-1.0
1,174,021	+				-0.7
1,174,029	-				+0.2
1,174,029	-				+1.1
1,174,108	+				+0.3
1,174,108	+				+0.0
1,174,118	+				+0.2
1,174,134	-				+0.2
1,174,173	+				+0.1
1,174,192	+				-1.3
1,174,192	+				-0.4
1,174,200	-				-0.5
1,174,200	-				+0.8
1,174,205	-				-0.1
1,174,215	-				-0.1
1,174,293	+				+0.8
1,174,347	-				+1.4
1,174,379	+				-0.5
1,174,379	+				+0.1
1,174,424	+				+0.4
1,174,429	+				+0.8
1,174,439	+		CCNA_01069	0.10	+0.0
1,174,462	+		CCNA_01069	0.12	+0.3
1,174,467	+		CCNA_01069	0.12	+0.0
1,174,472	+		CCNA_01069	0.12	+0.5
1,174,472	+		CCNA_01069	0.12	+0.5
1,174,495	-		CCNA_01069	0.14	-0.3
1,174,507	-		CCNA_01069	0.15	-1.0
1,174,556	+		CCNA_01069	0.18	+0.7
1,174,556	+		CCNA_01069	0.18	-0.2
1,174,556	+		CCNA_01069	0.18	+0.7
1,174,556	+		CCNA_01069	0.18	+0.8
1,174,562	+		CCNA_01069	0.18	+0.0
1,174,564	-		CCNA_01069	0.18	-0.5
1,174,564	-		CCNA_01069	0.18	-0.3
1,174,577	-		CCNA_01069	0.19	-0.8
1,174,640	-		CCNA_01069	0.23	-2.5
1,174,646	-		CCNA_01069	0.24	-0.6
1,174,684	-		CCNA_01069	0.26	-1.0
1,174,724	-		CCNA_01069	0.29	+0.9
1,174,725	+		CCNA_01069	0.29	+1.0
1,174,726	+		CCNA_01069	0.29	-0.5
1,174,737	+		CCNA_01069	0.29	+0.2
1,174,737	+		CCNA_01069	0.29	+0.4
1,174,737	+		CCNA_01069	0.29	-0.3
1,174,737	+		CCNA_01069	0.29	-0.9
1,174,793	+		CCNA_01069	0.33	-0.1
1,174,804	+		CCNA_01069	0.34	+1.6
1,174,832	-		CCNA_01069	0.36	-1.4
1,174,839	+		CCNA_01069	0.36	+1.0
1,174,889	+		CCNA_01069	0.39	+0.4
1,174,905	+		CCNA_01069	0.40	-0.4
1,174,920	-		CCNA_01069	0.41	+0.1
1,174,930	-		CCNA_01069	0.42	-1.1
1,174,934	+		CCNA_01069	0.42	-0.2
1,174,959	+		CCNA_01069	0.44	-0.7
1,174,969	-		CCNA_01069	0.45	-1.7
1,175,003	-		CCNA_01069	0.47	-0.9
1,175,049	-		CCNA_01069	0.50	-1.1
1,175,051	-		CCNA_01069	0.50	+0.6
1,175,060	+		CCNA_01069	0.51	+0.3
1,175,094	+		CCNA_01069	0.53	+0.7
1,175,102	-		CCNA_01069	0.53	-1.3
1,175,118	-		CCNA_01069	0.54	-0.3
1,175,126	+		CCNA_01069	0.55	+0.5