Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01041

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,135,583	+		CCNA_01040	0.40	-0.8
1,135,653	+		CCNA_01040	0.44	+0.7
1,135,653	-		CCNA_01040	0.44	+0.3
1,135,657	+		CCNA_01040	0.44	+1.8
1,135,661	-		CCNA_01040	0.45	-0.4
1,135,699	-		CCNA_01040	0.47	+0.3
1,135,812	+		CCNA_01040	0.54	-0.3
1,135,860	+		CCNA_01040	0.57	+0.1
1,135,868	-		CCNA_01040	0.57	-0.7
1,135,917	-		CCNA_01040	0.60	+0.4
1,135,917	-		CCNA_01040	0.60	-0.0
1,135,989	+		CCNA_01040	0.65	-0.2
1,136,000	+		CCNA_01040	0.65	+2.4
1,136,009	-		CCNA_01040	0.66	+0.5
1,136,020	+		CCNA_01040	0.66	-0.2
1,136,034	+		CCNA_01040	0.67	+0.2
1,136,034	+		CCNA_01040	0.67	-1.5
1,136,044	-		CCNA_01040	0.68	-0.7
1,136,051	+		CCNA_01040	0.68	+0.1
1,136,063	+		CCNA_01040	0.69	+0.8
1,136,063	+		CCNA_01040	0.69	-0.5
1,136,078	+		CCNA_01040	0.70	+1.2
1,136,112	-		CCNA_01040	0.72	+1.2
1,136,131	-		CCNA_01040	0.73	-2.8
1,136,131	-		CCNA_01040	0.73	+0.1
1,136,139	-		CCNA_01040	0.74	+0.8
1,136,153	-		CCNA_01040	0.75	-0.4
1,136,170	-		CCNA_01040	0.76	-1.7
1,136,183	-		CCNA_01040	0.76	-0.7
1,136,192	-		CCNA_01040	0.77	-0.1
1,136,207	-		CCNA_01040	0.78	-1.2
1,136,217	+		CCNA_01040	0.78	-1.1
1,136,235	-		CCNA_01040	0.80	-1.0
1,136,243	+		CCNA_01040	0.80	-1.5
1,136,258	+		CCNA_01040	0.81	-1.0
1,136,321	-		CCNA_01040	0.85	+0.5
1,136,368	+		CCNA_01040	0.88	-0.1
1,136,418	+				-1.4
1,136,529	+				+0.3
1,136,547	+				-0.1
1,136,563	+				+0.7
1,136,598	+		CCNA_01041	0.21	+0.4
1,136,603	+		CCNA_01041	0.24	+0.6
1,136,606	-		CCNA_01041	0.27	+1.2
1,136,606	-		CCNA_01041	0.27	+1.5
1,136,611	-		CCNA_01041	0.30	-0.1
1,136,624	-		CCNA_01041	0.40	+0.3
1,136,637	+		CCNA_01041	0.50	-0.5
1,136,671	+		CCNA_01041	0.75	+0.8
1,136,671	+		CCNA_01041	0.75	-0.1
1,136,671	+		CCNA_01041	0.75	+0.0
1,136,671	+		CCNA_01041	0.75	-0.0
1,136,679	-		CCNA_01041	0.81	-1.0
1,136,679	-		CCNA_01041	0.81	+0.3
1,136,679	-		CCNA_01041	0.81	+0.0
1,136,679	-		CCNA_01041	0.81	+1.0
1,136,710	+				+0.2
1,136,726	-				-0.0
1,136,733	-				+1.0
1,136,739	+				-0.7
1,136,739	+				-0.9
1,136,747	-				+0.3
1,136,755	-				-1.1
1,136,770	+				+0.8
1,136,792	+				+0.2
1,136,792	-				+0.0
1,136,800	-				-0.2
1,136,880	-				+0.6
1,136,889	+				-1.2
1,136,894	+				-0.0
1,136,894	+				-0.3
1,136,907	-				-0.6
1,136,934	+				+1.3
1,136,934	+				+0.2
1,136,934	+				+0.0
1,136,937	+				-2.2
1,136,942	-				+0.2
1,136,952	-				-0.3
1,136,990	+				+0.0
1,136,990	+				+0.3
1,136,998	-				+1.3
1,136,998	-				-0.2
1,137,000	+				-0.7
1,137,161	+				+0.6
1,137,161	+				-0.1
1,137,161	+				+0.5
1,137,169	-				+0.3
1,137,169	-				+0.1
1,137,172	+				+0.9
1,137,200	-				+0.0
1,137,246	+				+3.0
1,137,266	-				+0.4
1,137,274	+				-0.7
1,137,284	-				+0.7
1,137,284	-				+0.4
1,137,284	-				+0.2
1,137,346	+				+2.8
1,137,360	+				-0.7
1,137,360	+				-0.9
1,137,360	+				-0.3
1,137,396	+				+0.6
1,137,421	-				-0.4
1,137,461	-				+0.4
1,137,472	-				-0.3
1,137,474	+				+0.9
1,137,474	-				+0.4
1,137,516	+				-1.4
1,137,516	+				+0.2
1,137,518	-		CCNA_01042	0.10	+0.6
1,137,524	-		CCNA_01042	0.10	+0.3
1,137,528	-		CCNA_01042	0.10	+0.3
1,137,541	-		CCNA_01042	0.11	-0.7
1,137,561	-		CCNA_01042	0.12	-0.1
1,137,576	+		CCNA_01042	0.12	-0.2
1,137,576	+		CCNA_01042	0.12	-0.4
1,137,584	-		CCNA_01042	0.13	-0.0
1,137,676	+		CCNA_01042	0.16	-0.5
1,137,676	+		CCNA_01042	0.16	-1.3
1,137,676	+		CCNA_01042	0.16	-1.3
1,137,676	+		CCNA_01042	0.16	-1.6
1,137,676	+		CCNA_01042	0.16	-1.1
1,137,693	+		CCNA_01042	0.17	-1.7