Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01025

Experiment: PYE with Dimethyl Sulfoxide 0.4 %

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Dimethyl Sulfoxide 0.4 %
1,111,130	-		CCNA_01023	0.79	+0.5
1,111,144	+		CCNA_01023	0.80	-0.4
1,111,160	+		CCNA_01023	0.81	+0.7
1,111,177	+		CCNA_01023	0.82	+0.7
1,111,182	+		CCNA_01023	0.82	+0.3
1,111,182	+		CCNA_01023	0.82	+0.3
1,111,182	+		CCNA_01023	0.82	+0.4
1,111,182	+		CCNA_01023	0.82	+0.6
1,111,190	-		CCNA_01023	0.83	-0.9
1,111,190	-		CCNA_01023	0.83	+0.3
1,111,196	-		CCNA_01023	0.83	+1.6
1,111,211	-		CCNA_01023	0.84	+0.6
1,111,257	+		CCNA_01023	0.87	-0.6
1,111,265	-		CCNA_01023	0.87	+0.1
1,111,265	-		CCNA_01023	0.87	+0.6
1,111,283	+		CCNA_01023	0.89	-0.1
1,111,291	-		CCNA_01023	0.89	+0.4
1,111,291	-		CCNA_01023	0.89	-1.6
1,111,293	+		CCNA_01023	0.89	+0.0
1,111,293	+		CCNA_01023	0.89	-0.2
1,111,293	+		CCNA_01023	0.89	-0.1
1,111,328	+				-1.5
1,111,328	+				+0.6
1,111,328	+				-1.5
1,111,328	+				+1.2
1,111,329	-				-0.0
1,111,336	-				-0.6
1,111,336	-				+0.3
1,111,336	-				+0.6
1,111,336	-				-0.4
1,111,337	+				-0.0
1,111,337	+				+0.5
1,111,381	-				+0.4
1,111,409	-				-0.4
1,111,440	+				-0.3
1,111,440	+				-1.3
1,111,448	-				+0.1
1,111,529	+				+0.3
1,111,537	-				+0.5
1,111,537	-				+1.2
1,111,538	+				+0.2
1,111,660	+				+0.6
1,111,668	-		CCNA_01024	0.10	+0.0
1,111,673	-		CCNA_01024	0.11	-0.2
1,111,673	-		CCNA_01024	0.11	+0.7
1,111,748	-		CCNA_01024	0.26	+0.2
1,111,791	-		CCNA_01024	0.35	+0.3
1,111,792	+		CCNA_01024	0.35	+0.5
1,111,799	-		CCNA_01024	0.37	+0.5
1,111,839	+		CCNA_01024	0.45	-1.2
1,111,844	+		CCNA_01024	0.46	-0.2
1,111,862	-		CCNA_01024	0.49	-0.3
1,111,873	+		CCNA_01024	0.52	-2.0
1,111,881	+		CCNA_01024	0.53	-1.4
1,111,966	-		CCNA_01024	0.71	+0.1
1,112,028	+		CCNA_01024	0.83	+0.6
1,112,028	+		CCNA_01024	0.83	+0.5
1,112,028	+		CCNA_01024	0.83	-1.8
1,112,028	+		CCNA_01024	0.83	+0.5
1,112,036	-		CCNA_01024	0.85	+0.0
1,112,036	-		CCNA_01024	0.85	-0.0
1,112,036	-		CCNA_01024	0.85	+0.1
1,112,036	-		CCNA_01024	0.85	+0.1
1,112,036	-		CCNA_01024	0.85	+0.5
1,112,048	+		CCNA_01024	0.87	+0.8
1,112,056	-		CCNA_01024	0.89	+0.4
1,112,056	-		CCNA_01024	0.89	+1.0
1,112,068	-				+0.3
1,112,083	+				-0.5
1,112,103	+				-0.0
1,112,106	-				-1.0
1,112,111	-				+1.0
1,112,111	-				+1.1
1,112,111	-				-0.1
1,112,121	-				+0.9
1,112,194	+		CCNA_01025	0.11	-0.4
1,112,194	+		CCNA_01025	0.11	-0.2
1,112,194	+		CCNA_01025	0.11	-0.5
1,112,201	+		CCNA_01025	0.12	-1.1
1,112,317	-		CCNA_01025	0.31	+0.8
1,112,344	-		CCNA_01025	0.35	-0.4
1,112,363	-		CCNA_01025	0.38	+0.6
1,112,386	-		CCNA_01025	0.42	+0.3
1,112,389	+		CCNA_01025	0.42	-1.2
1,112,397	-		CCNA_01025	0.44	+1.1
1,112,399	+		CCNA_01025	0.44	-2.0
1,112,407	-		CCNA_01025	0.45	+0.3
1,112,420	-		CCNA_01025	0.47	-0.1
1,112,474	+		CCNA_01025	0.56	-0.9
1,112,501	+		CCNA_01025	0.60	+0.2
1,112,508	-		CCNA_01025	0.62	+0.4
1,112,517	+		CCNA_01025	0.63	-1.2
1,112,517	+		CCNA_01025	0.63	+0.5
1,112,525	+		CCNA_01025	0.64	+0.8
1,112,542	-		CCNA_01025	0.67	+0.2
1,112,667	+		CCNA_01025	0.87	+0.2
1,112,667	+		CCNA_01025	0.87	+0.1
1,112,667	+		CCNA_01025	0.87	-1.0
1,112,667	+		CCNA_01025	0.87	-0.9
1,112,667	+		CCNA_01025	0.87	-0.9
1,112,667	+		CCNA_01025	0.87	+0.1
1,112,670	-		CCNA_01025	0.88	+0.4
1,112,675	-		CCNA_01025	0.88	+0.5
1,112,688	-				+0.1
1,112,688	-				+0.2
1,112,688	-				-0.1
1,112,693	+				-1.3
1,112,700	-				+2.6
1,112,750	+				+0.3
1,112,758	-				+0.3
1,112,808	+		CCNA_01026	0.11	-1.0
1,112,816	-		CCNA_01026	0.12	+0.3
1,112,878	+		CCNA_01026	0.20	+0.2
1,112,883	-		CCNA_01026	0.21	+0.4
1,112,891	-		CCNA_01026	0.22	+0.3
1,112,896	+		CCNA_01026	0.23	-1.1
1,112,947	-		CCNA_01026	0.30	+1.9
1,112,967	+		CCNA_01026	0.33	+0.3
1,112,980	-		CCNA_01026	0.35	+0.7
1,113,091	+		CCNA_01026	0.50	+0.8
1,113,109	-		CCNA_01026	0.53	+0.1
1,113,109	-		CCNA_01026	0.53	+1.3
1,113,135	+		CCNA_01026	0.56	-0.6
1,113,143	-		CCNA_01026	0.57	+0.0
1,113,143	-		CCNA_01026	0.57	+0.1
1,113,162	+		CCNA_01026	0.60	+0.0
1,113,180	+		CCNA_01026	0.62	+0.1
1,113,180	+		CCNA_01026	0.62	-0.5
1,113,180	+		CCNA_01026	0.62	+0.9
1,113,188	-		CCNA_01026	0.63	+0.2
1,113,188	-		CCNA_01026	0.63	+1.0
1,113,195	+		CCNA_01026	0.64	+1.2
1,113,245	+		CCNA_01026	0.71	+0.6
1,113,251	+		CCNA_01026	0.72	+0.1
1,113,254	-		CCNA_01026	0.73	+1.0
1,113,254	-		CCNA_01026	0.73	+0.2
1,113,261	+		CCNA_01026	0.74	-0.2
1,113,280	-		CCNA_01026	0.76	+0.2
1,113,280	-		CCNA_01026	0.76	+0.2
1,113,291	-		CCNA_01026	0.78	+0.0
1,113,301	+		CCNA_01026	0.79	+0.5
1,113,327	+		CCNA_01026	0.83	-0.2
1,113,331	+		CCNA_01026	0.83	-0.3
1,113,384	-				-0.7
1,113,417	+				-0.3
1,113,425	-				+0.3
1,113,475	+				-1.8
1,113,475	+				-0.3
1,113,475	+				+0.6
1,113,486	+				-0.1
1,113,494	-				-0.1
1,113,494	-				-0.9
1,113,510	+				-0.1
1,113,511	-				+0.4
1,113,517	+				-0.7
1,113,535	+				+0.5
1,113,538	-				-0.9
1,113,545	+				-0.5
1,113,557	+				-1.3
1,113,584	+				-0.3
1,113,584	+				+1.5
1,113,584	+				-0.8
1,113,592	-				+0.7
1,113,640	+				+0.1
1,113,644	+				+0.8
1,113,691	-		CCNA_01027	0.12	-1.6
1,113,699	+		CCNA_01027	0.14	+0.5
1,113,701	+		CCNA_01027	0.14	-0.6
1,113,701	+		CCNA_01027	0.14	-0.5
1,113,709	-		CCNA_01027	0.17	-0.5
1,113,709	-		CCNA_01027	0.17	-1.1
1,113,709	-		CCNA_01027	0.17	-1.8
1,113,709	-		CCNA_01027	0.17	-2.0
1,113,709	-		CCNA_01027	0.17	-0.7
1,113,709	-		CCNA_01027	0.17	-1.7
1,113,709	-		CCNA_01027	0.17	-1.1
1,113,711	+		CCNA_01027	0.17	+0.5
1,113,731	+		CCNA_01027	0.23	+0.3
1,113,737	-		CCNA_01027	0.24	-1.0