Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS19175

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
3,847,137	+		ABIE40_RS19170	0.13	+1.1
3,847,188	+		ABIE40_RS19170	0.18	+0.7
3,847,188	+		ABIE40_RS19170	0.18	-0.8
3,847,189	-		ABIE40_RS19170	0.18	-0.1
3,847,189	-		ABIE40_RS19170	0.18	+0.4
3,847,189	-		ABIE40_RS19170	0.18	+0.1
3,847,189	-		ABIE40_RS19170	0.18	-1.0
3,847,189	-		ABIE40_RS19170	0.18	-0.1
3,847,300	-		ABIE40_RS19170	0.31	-0.9
3,847,389	+		ABIE40_RS19170	0.40	+0.0
3,847,390	-		ABIE40_RS19170	0.41	+0.7
3,847,390	-		ABIE40_RS19170	0.41	-0.7
3,847,448	+		ABIE40_RS19170	0.47	+0.5
3,847,448	+		ABIE40_RS19170	0.47	+1.7
3,847,448	+		ABIE40_RS19170	0.47	-0.6
3,847,448	+		ABIE40_RS19170	0.47	-1.1
3,847,449	-		ABIE40_RS19170	0.47	-1.0
3,847,449	-		ABIE40_RS19170	0.47	+0.9
3,847,683	+		ABIE40_RS19170	0.73	-0.3
3,847,683	+		ABIE40_RS19170	0.73	+1.0
3,847,684	-		ABIE40_RS19170	0.73	+1.2
3,847,911	+				+0.3
3,847,911	+				-0.3
3,847,911	+				-1.7
3,847,964	+				+1.0
3,847,965	-				+0.9
3,848,034	-				-0.7
3,848,034	-				-1.5
3,848,049	-				-2.1
3,848,328	+		ABIE40_RS19175	0.12	-0.9
3,848,329	-		ABIE40_RS19175	0.12	+0.6
3,848,546	+		ABIE40_RS19175	0.23	-0.7
3,848,546	+		ABIE40_RS19175	0.23	-1.2
3,848,546	+		ABIE40_RS19175	0.23	-0.3
3,848,546	+		ABIE40_RS19175	0.23	-0.9
3,848,546	+		ABIE40_RS19175	0.23	+0.3
3,848,546	+		ABIE40_RS19175	0.23	+1.9
3,848,547	-		ABIE40_RS19175	0.23	-1.4
3,848,547	-		ABIE40_RS19175	0.23	-0.8
3,848,547	-		ABIE40_RS19175	0.23	-0.5
3,848,563	-		ABIE40_RS19175	0.24	+0.3
3,848,564	+		ABIE40_RS19175	0.24	-0.9
3,848,564	+		ABIE40_RS19175	0.24	+2.8
3,848,564	+		ABIE40_RS19175	0.24	+0.5
3,848,565	-		ABIE40_RS19175	0.24	-0.9
3,848,583	+		ABIE40_RS19175	0.25	-0.7
3,848,584	-		ABIE40_RS19175	0.25	-1.5
3,848,584	-		ABIE40_RS19175	0.25	-1.3
3,848,584	-		ABIE40_RS19175	0.25	-2.6
3,848,584	-		ABIE40_RS19175	0.25	+1.4
3,848,584	-		ABIE40_RS19175	0.25	+0.4
3,848,584	-		ABIE40_RS19175	0.25	-0.0
3,848,585	+		ABIE40_RS19175	0.25	-0.1
3,848,585	+		ABIE40_RS19175	0.25	-0.8
3,848,585	+		ABIE40_RS19175	0.25	-0.7
3,848,585	+		ABIE40_RS19175	0.25	+0.2
3,848,585	+		ABIE40_RS19175	0.25	-0.1
3,848,585	+		ABIE40_RS19175	0.25	-1.5
3,848,586	-		ABIE40_RS19175	0.25	-0.4
3,848,586	-		ABIE40_RS19175	0.25	+0.3
3,848,586	-		ABIE40_RS19175	0.25	+0.9
3,848,586	-		ABIE40_RS19175	0.25	+0.8
3,848,586	-		ABIE40_RS19175	0.25	-0.4
3,848,586	-		ABIE40_RS19175	0.25	-0.0
3,848,586	-		ABIE40_RS19175	0.25	+0.3
3,848,586	-		ABIE40_RS19175	0.25	+0.2
3,848,586	-		ABIE40_RS19175	0.25	-2.6
3,848,588	+		ABIE40_RS19175	0.25	+0.2
3,848,610	-		ABIE40_RS19175	0.26	+0.4
3,848,610	-		ABIE40_RS19175	0.26	-1.3
3,848,610	-		ABIE40_RS19175	0.26	-0.2
3,848,685	+		ABIE40_RS19175	0.30	+0.3
3,848,685	+		ABIE40_RS19175	0.30	+0.1
3,848,946	+		ABIE40_RS19175	0.44	-0.7
3,848,946	+		ABIE40_RS19175	0.44	-0.3
3,848,946	+		ABIE40_RS19175	0.44	-0.4
3,848,946	+		ABIE40_RS19175	0.44	-0.4
3,848,948	+		ABIE40_RS19175	0.44	-0.3
3,848,948	+		ABIE40_RS19175	0.44	+0.0
3,848,948	+		ABIE40_RS19175	0.44	-0.6
3,848,949	-		ABIE40_RS19175	0.44	-0.8
3,848,949	-		ABIE40_RS19175	0.44	+0.1
3,848,949	-		ABIE40_RS19175	0.44	-0.0
3,848,949	-		ABIE40_RS19175	0.44	+1.8
3,849,032	+		ABIE40_RS19175	0.48	+1.1
3,849,033	-		ABIE40_RS19175	0.48	+0.3
3,849,033	-		ABIE40_RS19175	0.48	-0.6
3,849,033	-		ABIE40_RS19175	0.48	-0.2
3,849,033	-		ABIE40_RS19175	0.48	+1.2
3,849,092	+		ABIE40_RS19175	0.52	-0.8
3,849,092	+		ABIE40_RS19175	0.52	+0.3
3,849,092	+		ABIE40_RS19175	0.52	-1.4
3,849,092	+		ABIE40_RS19175	0.52	-0.1
3,849,092	+		ABIE40_RS19175	0.52	+0.3
3,849,093	-		ABIE40_RS19175	0.52	+0.6
3,849,093	-		ABIE40_RS19175	0.52	+0.0
3,849,093	-		ABIE40_RS19175	0.52	+0.1
3,849,128	+		ABIE40_RS19175	0.53	-0.4
3,849,129	-		ABIE40_RS19175	0.53	-0.3
3,849,135	+		ABIE40_RS19175	0.54	+0.3
3,849,135	+		ABIE40_RS19175	0.54	+0.2
3,849,135	+		ABIE40_RS19175	0.54	-0.1
3,849,136	-		ABIE40_RS19175	0.54	+0.8
3,849,136	-		ABIE40_RS19175	0.54	-0.0
3,849,137	+		ABIE40_RS19175	0.54	+0.5
3,849,137	+		ABIE40_RS19175	0.54	+0.1
3,849,137	+		ABIE40_RS19175	0.54	-0.2
3,849,137	+		ABIE40_RS19175	0.54	-0.8
3,849,137	+		ABIE40_RS19175	0.54	+2.4
3,849,138	-		ABIE40_RS19175	0.54	-0.9
3,849,138	-		ABIE40_RS19175	0.54	-0.2
3,849,138	-		ABIE40_RS19175	0.54	-1.5
3,849,138	-		ABIE40_RS19175	0.54	-0.2
3,849,203	+		ABIE40_RS19175	0.57	+0.6
3,849,203	+		ABIE40_RS19175	0.57	-0.5
3,849,203	+		ABIE40_RS19175	0.57	+0.2
3,849,203	+		ABIE40_RS19175	0.57	-0.6
3,849,203	+		ABIE40_RS19175	0.57	-0.0
3,849,203	+		ABIE40_RS19175	0.57	-0.2
3,849,203	+		ABIE40_RS19175	0.57	-1.8
3,849,204	-		ABIE40_RS19175	0.57	+0.3
3,849,207	+		ABIE40_RS19175	0.58	+0.7
3,849,207	+		ABIE40_RS19175	0.58	+0.3
3,849,207	+		ABIE40_RS19175	0.58	+0.2
3,849,207	+		ABIE40_RS19175	0.58	-0.9
3,849,207	+		ABIE40_RS19175	0.58	-0.5
3,849,207	+		ABIE40_RS19175	0.58	+0.1
3,849,207	+		ABIE40_RS19175	0.58	-0.0
3,849,208	-		ABIE40_RS19175	0.58	+0.6
3,849,208	-		ABIE40_RS19175	0.58	+0.1
3,849,208	-		ABIE40_RS19175	0.58	-1.4
3,849,208	-		ABIE40_RS19175	0.58	-0.5
3,849,208	-		ABIE40_RS19175	0.58	-0.5
3,849,208	-		ABIE40_RS19175	0.58	-1.7
3,849,237	+		ABIE40_RS19175	0.59	+1.3
3,849,237	+		ABIE40_RS19175	0.59	-0.9
3,849,237	+		ABIE40_RS19175	0.59	+0.2
3,849,238	-		ABIE40_RS19175	0.59	-0.1
3,849,293	+		ABIE40_RS19175	0.62	+2.3
3,849,293	+		ABIE40_RS19175	0.62	+0.3
3,849,294	-		ABIE40_RS19175	0.62	-0.1
3,849,294	-		ABIE40_RS19175	0.62	-0.3
3,849,294	-		ABIE40_RS19175	0.62	+0.6
3,849,294	-		ABIE40_RS19175	0.62	+1.5
3,849,302	+		ABIE40_RS19175	0.63	+0.7
3,849,302	+		ABIE40_RS19175	0.63	-0.9
3,849,302	+		ABIE40_RS19175	0.63	-0.0
3,849,302	+		ABIE40_RS19175	0.63	-1.1
3,849,303	-		ABIE40_RS19175	0.63	-1.5
3,849,330	+		ABIE40_RS19175	0.64	-0.1
3,849,331	-		ABIE40_RS19175	0.64	+0.0
3,849,331	-		ABIE40_RS19175	0.64	-0.5
3,849,408	+		ABIE40_RS19175	0.68	-1.7
3,849,408	+		ABIE40_RS19175	0.68	+1.6
3,849,408	+		ABIE40_RS19175	0.68	+0.5
3,849,408	+		ABIE40_RS19175	0.68	-0.7
3,849,409	-		ABIE40_RS19175	0.68	+0.1
3,849,409	-		ABIE40_RS19175	0.68	-1.1
3,849,409	-		ABIE40_RS19175	0.68	-0.2
3,849,486	+		ABIE40_RS19175	0.72	+0.5
3,849,486	+		ABIE40_RS19175	0.72	-0.3
3,849,486	+		ABIE40_RS19175	0.72	+1.9
3,849,487	-		ABIE40_RS19175	0.72	+0.6
3,849,487	-		ABIE40_RS19175	0.72	+0.3
3,849,487	-		ABIE40_RS19175	0.72	-1.1
3,849,487	-		ABIE40_RS19175	0.72	-0.2
3,849,487	-		ABIE40_RS19175	0.72	+1.9
3,849,487	-		ABIE40_RS19175	0.72	-0.7
3,849,487	-		ABIE40_RS19175	0.72	-1.6
3,849,487	-		ABIE40_RS19175	0.72	-0.0
3,849,487	-		ABIE40_RS19175	0.72	-1.1
3,849,487	-		ABIE40_RS19175	0.72	+0.3
3,849,488	+		ABIE40_RS19175	0.72	-1.9
3,849,488	+		ABIE40_RS19175	0.72	+0.2
3,849,488	+		ABIE40_RS19175	0.72	+0.1
3,849,488	+		ABIE40_RS19175	0.72	-0.6
3,849,488	+		ABIE40_RS19175	0.72	+0.5
3,849,488	+		ABIE40_RS19175	0.72	-2.0
3,849,488	+		ABIE40_RS19175	0.72	-0.4
3,849,488	+		ABIE40_RS19175	0.72	+1.3
3,849,488	+		ABIE40_RS19175	0.72	+0.1
3,849,488	+		ABIE40_RS19175	0.72	-0.5
3,849,489	-		ABIE40_RS19175	0.72	-1.9
3,849,489	-		ABIE40_RS19175	0.72	-1.2
3,849,489	-		ABIE40_RS19175	0.72	+0.8
3,849,489	-		ABIE40_RS19175	0.72	-1.0
3,849,489	-		ABIE40_RS19175	0.72	+0.6
3,849,489	-		ABIE40_RS19175	0.72	-0.3
3,849,489	-		ABIE40_RS19175	0.72	+0.0
3,849,489	-		ABIE40_RS19175	0.72	+0.2
3,849,489	-		ABIE40_RS19175	0.72	+2.1
3,849,667	-		ABIE40_RS19175	0.82	-0.1
3,849,667	-		ABIE40_RS19175	0.82	-0.1
3,849,667	-		ABIE40_RS19175	0.82	-0.1
3,849,667	-		ABIE40_RS19175	0.82	-0.3
3,849,667	-		ABIE40_RS19175	0.82	+0.7
3,849,668	+		ABIE40_RS19175	0.82	-2.2
3,849,668	+		ABIE40_RS19175	0.82	-0.5
3,849,668	+		ABIE40_RS19175	0.82	+0.3
3,849,668	+		ABIE40_RS19175	0.82	-0.3
3,849,668	+		ABIE40_RS19175	0.82	+0.3
3,849,668	+		ABIE40_RS19175	0.82	-0.9
3,849,668	+		ABIE40_RS19175	0.82	-2.9
3,849,668	+		ABIE40_RS19175	0.82	-0.6
3,849,668	+		ABIE40_RS19175	0.82	-3.1
3,849,668	+		ABIE40_RS19175	0.82	-0.5
3,849,669	-		ABIE40_RS19175	0.82	+2.6
3,849,669	-		ABIE40_RS19175	0.82	+0.1
3,849,669	-		ABIE40_RS19175	0.82	+0.7
3,849,669	-		ABIE40_RS19175	0.82	-1.4
3,849,669	-		ABIE40_RS19175	0.82	+0.4
3,849,669	-		ABIE40_RS19175	0.82	-1.1
3,849,669	-		ABIE40_RS19175	0.82	-1.0
3,849,669	-		ABIE40_RS19175	0.82	-1.1
3,849,669	-		ABIE40_RS19175	0.82	+0.5
3,849,669	-		ABIE40_RS19175	0.82	-0.8
3,849,752	+		ABIE40_RS19175	0.86	-1.0
3,849,752	+		ABIE40_RS19175	0.86	-0.2
3,849,753	-		ABIE40_RS19175	0.86	-0.5
3,849,753	-		ABIE40_RS19175	0.86	+1.0
3,849,753	-		ABIE40_RS19175	0.86	+3.9
3,849,753	-		ABIE40_RS19175	0.86	-1.2
3,849,798	+		ABIE40_RS19175	0.88	-1.0
3,849,798	+		ABIE40_RS19175	0.88	+0.3
3,849,798	+		ABIE40_RS19175	0.88	+0.0
3,849,798	+		ABIE40_RS19175	0.88	+0.5
3,849,799	-		ABIE40_RS19175	0.89	+0.5
3,849,799	-		ABIE40_RS19175	0.89	+0.8
3,849,799	-		ABIE40_RS19175	0.89	-0.0
3,849,799	-		ABIE40_RS19175	0.89	-1.0
3,849,799	-		ABIE40_RS19175	0.89	-0.9
3,849,799	-		ABIE40_RS19175	0.89	+0.0
3,849,799	-		ABIE40_RS19175	0.89	-0.4
3,849,855	+				-0.7
3,849,855	+				-1.4
3,849,855	+				-0.3
3,849,856	-				-0.4
3,849,856	-				+0.7
3,849,856	-				-2.0
3,849,856	-				+1.9
3,849,910	+				+0.7
3,849,910	+				+0.4
3,849,911	-				-1.2
3,849,992	+				-0.9
3,849,992	+				-0.3
3,849,992	+				+0.2
3,849,993	-				+0.2
3,849,993	-				+1.9
3,850,004	+				-0.2
3,850,043	+				+0.2
3,850,043	+				-0.3
3,850,043	+				-0.7
3,850,043	+				-1.2
3,850,043	+				-1.0
3,850,043	+				-1.0
3,850,043	+				+0.9
3,850,044	-				-0.2
3,850,044	-				-1.4
3,850,044	-				-1.9
3,850,044	-				-2.0
3,850,044	-				+1.4
3,850,044	-				-0.4
3,850,044	-				-0.5
3,850,044	-				-0.5
3,850,045	+				-0.1
3,850,045	+				-0.7
3,850,046	-				-1.5
3,850,046	-				+1.1
3,850,046	-				-1.0
3,850,057	-				-0.4
3,850,167	-		ABIE40_RS19180	0.10	+2.3
3,850,388	+		ABIE40_RS19180	0.44	-0.7
3,850,388	+		ABIE40_RS19180	0.44	-0.9
3,850,388	+		ABIE40_RS19180	0.44	+0.6
3,850,764	-				+0.1
3,850,780	+				-0.1
3,850,780	+				+0.7
3,850,780	+				-0.3
3,850,780	+				+2.2
3,850,780	+				+0.3
3,850,780	+				+1.0
3,850,780	+				-1.2
3,850,780	+				+0.6
3,850,781	-				+1.2
3,850,781	-				-2.1
3,850,781	-				-0.3
3,850,781	-				-1.0
3,850,781	-				-0.2
3,850,781	-				+0.1
3,850,781	-				+0.2
3,850,781	-				+1.9
3,850,781	-				-0.7
3,850,801	+				-0.2
3,850,802	-				-0.9
3,850,896	+				-0.1
3,850,896	+				-0.0