Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS17480

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
3,493,443	+		ABIE40_RS17475	0.15	-0.4
3,493,443	+		ABIE40_RS17475	0.15	+1.4
3,493,443	+		ABIE40_RS17475	0.15	+0.0
3,493,444	-		ABIE40_RS17475	0.15	+1.1
3,493,444	-		ABIE40_RS17475	0.15	+0.9
3,493,445	+		ABIE40_RS17475	0.15	+0.1
3,493,445	+		ABIE40_RS17475	0.15	-0.6
3,493,445	+		ABIE40_RS17475	0.15	-0.8
3,493,446	-		ABIE40_RS17475	0.15	+1.3
3,493,446	-		ABIE40_RS17475	0.15	+1.4
3,493,446	-		ABIE40_RS17475	0.15	+0.6
3,493,446	-		ABIE40_RS17475	0.15	+0.3
3,493,487	+		ABIE40_RS17475	0.20	-0.1
3,493,487	+		ABIE40_RS17475	0.20	+0.5
3,493,488	-		ABIE40_RS17475	0.20	-0.1
3,493,488	-		ABIE40_RS17475	0.20	+0.9
3,493,499	+		ABIE40_RS17475	0.21	-0.5
3,493,499	+		ABIE40_RS17475	0.21	+0.0
3,493,499	+		ABIE40_RS17475	0.21	-0.3
3,493,499	+		ABIE40_RS17475	0.21	-0.7
3,493,499	+		ABIE40_RS17475	0.21	+0.9
3,493,500	-		ABIE40_RS17475	0.21	+0.0
3,493,500	-		ABIE40_RS17475	0.21	+1.0
3,493,500	-		ABIE40_RS17475	0.21	+2.5
3,493,520	+		ABIE40_RS17475	0.23	+0.8
3,493,520	+		ABIE40_RS17475	0.23	+0.8
3,493,520	+		ABIE40_RS17475	0.23	+0.0
3,493,521	-		ABIE40_RS17475	0.23	-0.1
3,493,523	+		ABIE40_RS17475	0.23	-0.2
3,493,524	-		ABIE40_RS17475	0.23	+1.1
3,493,524	-		ABIE40_RS17475	0.23	+1.3
3,493,664	+		ABIE40_RS17475	0.38	+0.1
3,493,664	+		ABIE40_RS17475	0.38	+2.1
3,493,664	+		ABIE40_RS17475	0.38	+0.6
3,493,665	-		ABIE40_RS17475	0.38	-0.4
3,493,668	+		ABIE40_RS17475	0.38	+0.8
3,493,669	-		ABIE40_RS17475	0.39	-0.1
3,493,669	-		ABIE40_RS17475	0.39	+0.5
3,493,669	-		ABIE40_RS17475	0.39	+0.5
3,493,729	-		ABIE40_RS17475	0.45	+1.2
3,493,749	+		ABIE40_RS17475	0.47	-1.5
3,493,749	+		ABIE40_RS17475	0.47	-1.0
3,493,749	+		ABIE40_RS17475	0.47	-0.8
3,493,749	+		ABIE40_RS17475	0.47	+0.5
3,493,749	+		ABIE40_RS17475	0.47	+2.9
3,493,749	+		ABIE40_RS17475	0.47	+0.6
3,493,749	+		ABIE40_RS17475	0.47	-0.1
3,493,749	+		ABIE40_RS17475	0.47	-0.9
3,493,749	+		ABIE40_RS17475	0.47	-1.2
3,493,750	-		ABIE40_RS17475	0.47	+3.6
3,493,750	-		ABIE40_RS17475	0.47	+0.3
3,493,750	-		ABIE40_RS17475	0.47	+3.6
3,493,750	-		ABIE40_RS17475	0.47	+1.7
3,493,750	-		ABIE40_RS17475	0.47	-1.2
3,493,779	-		ABIE40_RS17475	0.50	+1.2
3,493,779	-		ABIE40_RS17475	0.50	+0.2
3,493,779	-		ABIE40_RS17475	0.50	-0.4
3,493,779	-		ABIE40_RS17475	0.50	+0.8
3,493,779	-		ABIE40_RS17475	0.50	+0.2
3,493,779	-		ABIE40_RS17475	0.50	-0.2
3,493,850	+		ABIE40_RS17475	0.57	-0.1
3,493,850	+		ABIE40_RS17475	0.57	-0.5
3,493,850	+		ABIE40_RS17475	0.57	-0.0
3,493,850	+		ABIE40_RS17475	0.57	-0.4
3,493,851	-		ABIE40_RS17475	0.57	-0.3
3,493,851	-		ABIE40_RS17475	0.57	-0.2
3,493,851	-		ABIE40_RS17475	0.57	-0.0
3,493,851	-		ABIE40_RS17475	0.57	+0.3
3,493,851	-		ABIE40_RS17475	0.57	-1.0
3,493,851	-		ABIE40_RS17475	0.57	+0.8
3,493,851	-		ABIE40_RS17475	0.57	+0.7
3,493,851	-		ABIE40_RS17475	0.57	+0.3
3,493,877	+		ABIE40_RS17475	0.60	+0.5
3,493,877	+		ABIE40_RS17475	0.60	+0.1
3,493,877	+		ABIE40_RS17475	0.60	-0.3
3,493,878	-		ABIE40_RS17475	0.60	+1.2
3,493,905	-		ABIE40_RS17475	0.63	+0.3
3,493,955	+		ABIE40_RS17475	0.68	-0.5
3,493,955	+		ABIE40_RS17475	0.68	-1.5
3,493,956	-		ABIE40_RS17475	0.68	+1.6
3,493,956	-		ABIE40_RS17475	0.68	+0.6
3,494,225	+				-0.3
3,494,225	+				+2.6
3,494,226	-				-0.3
3,494,226	-				+0.3
3,494,251	+				-0.5
3,494,286	+				+0.3
3,494,287	-				+0.9
3,494,287	-				-1.4
3,494,287	-				+1.3
3,494,287	-				-0.4
3,494,287	-				+0.4
3,494,325	-				+1.0
3,494,393	+				-0.4
3,494,394	-				-0.6
3,494,394	-				+1.0
3,494,442	+		ABIE40_RS17480	0.12	-0.9
3,494,442	+		ABIE40_RS17480	0.12	-0.3
3,494,442	+		ABIE40_RS17480	0.12	+2.0
3,494,443	-		ABIE40_RS17480	0.12	+1.3
3,494,443	-		ABIE40_RS17480	0.12	-1.6
3,494,504	+		ABIE40_RS17480	0.20	+0.9
3,494,504	+		ABIE40_RS17480	0.20	-0.2
3,494,512	+		ABIE40_RS17480	0.21	+1.6
3,494,595	-		ABIE40_RS17480	0.31	-0.7
3,494,762	+		ABIE40_RS17480	0.51	+0.5
3,494,763	-		ABIE40_RS17480	0.51	-0.4
3,494,780	+		ABIE40_RS17480	0.53	-2.3
3,494,780	+		ABIE40_RS17480	0.53	-0.3
3,494,781	-		ABIE40_RS17480	0.53	-0.6
3,494,781	-		ABIE40_RS17480	0.53	+0.3
3,494,781	-		ABIE40_RS17480	0.53	+0.8
3,494,782	+		ABIE40_RS17480	0.53	-0.2
3,494,916	+		ABIE40_RS17480	0.69	+0.1
3,494,916	+		ABIE40_RS17480	0.69	-0.0
3,494,928	+		ABIE40_RS17480	0.71	+0.2
3,495,010	+		ABIE40_RS17480	0.80	-0.2
3,495,010	+		ABIE40_RS17480	0.80	+1.6
3,495,010	+		ABIE40_RS17480	0.80	-2.2
3,495,010	+		ABIE40_RS17480	0.80	-1.5
3,495,011	-		ABIE40_RS17480	0.81	+0.8
3,495,011	-		ABIE40_RS17480	0.81	+0.1
3,495,011	-		ABIE40_RS17480	0.81	+0.9
3,495,015	+		ABIE40_RS17480	0.81	+2.2
3,495,015	+		ABIE40_RS17480	0.81	+1.1
3,495,016	-		ABIE40_RS17480	0.81	+0.5
3,495,016	-		ABIE40_RS17480	0.81	+0.9
3,495,032	+		ABIE40_RS17480	0.83	+1.2
3,495,032	+		ABIE40_RS17480	0.83	-0.3
3,495,032	+		ABIE40_RS17480	0.83	+2.6
3,495,032	+		ABIE40_RS17480	0.83	+1.2
3,495,033	-		ABIE40_RS17480	0.83	-0.7
3,495,080	+		ABIE40_RS17480	0.89	+0.5
3,495,081	-		ABIE40_RS17480	0.89	-0.7
3,495,081	-		ABIE40_RS17480	0.89	+0.4
3,495,081	-		ABIE40_RS17480	0.89	-0.2
3,495,206	+				+1.0
3,495,206	+				+0.6
3,495,206	+				+0.5
3,495,206	+				+1.0
3,495,207	-				+1.5
3,495,207	-				-0.3
3,495,207	-				+1.0
3,495,207	-				+0.7
3,495,207	-				-0.7
3,495,439	+				-0.2
3,495,439	+				+0.9
3,495,440	-				+1.1
3,495,440	-				+1.0
3,495,440	-				+0.6
3,495,440	-				-0.3
3,495,440	-				+0.5
3,495,520	+		ABIE40_RS17490	0.18	+1.2
3,495,520	+		ABIE40_RS17490	0.18	+0.4
3,495,570	+		ABIE40_RS17490	0.26	+0.9
3,495,570	+		ABIE40_RS17490	0.26	-1.2
3,495,570	+		ABIE40_RS17490	0.26	+0.5
3,495,571	-		ABIE40_RS17490	0.26	+1.3
3,495,571	-		ABIE40_RS17490	0.26	+1.6
3,495,571	-		ABIE40_RS17490	0.26	-1.8
3,495,571	-		ABIE40_RS17490	0.26	+1.1
3,495,571	-		ABIE40_RS17490	0.26	-1.0
3,495,571	-		ABIE40_RS17490	0.26	+2.4
3,495,571	-		ABIE40_RS17490	0.26	-0.4
3,495,676	+		ABIE40_RS17490	0.45	+0.4
3,495,677	-		ABIE40_RS17490	0.45	+1.8
3,495,819	+		ABIE40_RS17490	0.69	-1.8
3,495,819	+		ABIE40_RS17490	0.69	+0.0
3,495,819	+		ABIE40_RS17490	0.69	+0.2
3,495,819	+		ABIE40_RS17490	0.69	-0.5
3,495,820	-		ABIE40_RS17490	0.69	+0.1
3,495,898	+		ABIE40_RS17490	0.83	-1.0
3,495,899	-		ABIE40_RS17490	0.83	+1.4
3,495,899	-		ABIE40_RS17490	0.83	+0.7
3,495,899	-		ABIE40_RS17490	0.83	+0.8
3,495,899	-		ABIE40_RS17490	0.83	+0.6
3,495,994	+				+0.1
3,495,994	+				-0.7
3,495,994	+				+0.8
3,495,994	+				-0.8
3,495,994	+				+0.5
3,495,995	-				-0.6
3,495,995	-				-0.1
3,495,995	-				+1.0
3,496,012	+				+0.7
3,496,013	-				+1.5
3,496,013	-				+0.4