Experiment: L-Threonine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24110 and ABID97_RS24115 are separated by 58 nucleotides ABID97_RS24115 and ABID97_RS24120 are separated by 90 nucleotides ABID97_RS24120 and ABID97_RS24125 overlap by 7 nucleotides ABID97_RS24125 and ABID97_RS24130 are separated by 78 nucleotides
ABID97_RS24110: ABID97_RS24110 - nucleotidyltransferase domain-containing protein, at 4,981,929 to 4,982,783
_RS24110
ABID97_RS24115: ABID97_RS24115 - hypothetical protein, at 4,982,842 to 4,983,516
_RS24115
ABID97_RS24120: ABID97_RS24120 - ribonuclease Z, at 4,983,607 to 4,984,575
_RS24120
ABID97_RS24125: ABID97_RS24125 - zinc-ribbon domain containing protein, at 4,984,569 to 4,985,222
_RS24125
ABID97_RS24130: ABID97_RS24130 - RtcB family protein, at 4,985,301 to 4,986,521
_RS24130
Position (kb) 4983
4984
4985 Strain fitness (log2 ratio) -1
0
1
2 at 4982.691 kb on + strand, within ABID97_RS24110 at 4982.692 kb on - strand, within ABID97_RS24110 at 4982.942 kb on + strand, within ABID97_RS24115 at 4983.092 kb on + strand, within ABID97_RS24115 at 4983.249 kb on + strand, within ABID97_RS24115 at 4983.250 kb on - strand, within ABID97_RS24115 at 4983.250 kb on - strand, within ABID97_RS24115 at 4983.309 kb on - strand, within ABID97_RS24115 at 4983.531 kb on + strand at 4983.532 kb on - strand at 4983.532 kb on - strand at 4983.702 kb on - strand at 4983.875 kb on + strand, within ABID97_RS24120 at 4983.875 kb on + strand, within ABID97_RS24120 at 4984.239 kb on - strand, within ABID97_RS24120 at 4984.931 kb on - strand, within ABID97_RS24125 at 4985.014 kb on + strand, within ABID97_RS24125 at 4985.014 kb on + strand, within ABID97_RS24125 at 4985.062 kb on + strand, within ABID97_RS24125 at 4985.255 kb on + strand at 4985.255 kb on + strand at 4985.303 kb on - strand at 4985.335 kb on + strand at 4985.336 kb on - strand at 4985.389 kb on + strand at 4985.389 kb on + strand at 4985.566 kb on + strand, within ABID97_RS24130 at 4985.566 kb on + strand, within ABID97_RS24130
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (C) remove 4,982,691 + ABID97_RS24110 0.89 +0.4 4,982,692 - ABID97_RS24110 0.89 +0.4 4,982,942 + ABID97_RS24115 0.15 -0.2 4,983,092 + ABID97_RS24115 0.37 +0.1 4,983,249 + ABID97_RS24115 0.60 -0.3 4,983,250 - ABID97_RS24115 0.60 +0.4 4,983,250 - ABID97_RS24115 0.60 -0.5 4,983,309 - ABID97_RS24115 0.69 -0.9 4,983,531 + -0.2 4,983,532 - +0.6 4,983,532 - +0.0 4,983,702 - +1.9 4,983,875 + ABID97_RS24120 0.28 -0.1 4,983,875 + ABID97_RS24120 0.28 +0.2 4,984,239 - ABID97_RS24120 0.65 +0.1 4,984,931 - ABID97_RS24125 0.55 -0.6 4,985,014 + ABID97_RS24125 0.68 +0.0 4,985,014 + ABID97_RS24125 0.68 +0.5 4,985,062 + ABID97_RS24125 0.75 +0.9 4,985,255 + -0.3 4,985,255 + -0.1 4,985,303 - -0.4 4,985,335 + +0.2 4,985,336 - -0.5 4,985,389 + +0.1 4,985,389 + -0.5 4,985,566 + ABID97_RS24130 0.22 -0.0 4,985,566 + ABID97_RS24130 0.22 -1.2
Or see this region's nucleotide sequence