Experiment: L-Threonine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS06750 and ABID97_RS06755 are separated by 104 nucleotides ABID97_RS06755 and ABID97_RS06760 are separated by 125 nucleotides ABID97_RS06760 and ABID97_RS06765 are separated by 1 nucleotides
ABID97_RS06750: ABID97_RS06750 - lytic murein transglycosylase, at 1,423,133 to 1,424,458
_RS06750
ABID97_RS06755: ABID97_RS06755 - putative Na+/H+ antiporter, at 1,424,563 to 1,425,822
_RS06755
ABID97_RS06760: ABID97_RS06760 - XRE family transcriptional regulator, at 1,425,948 to 1,426,535
_RS06760
ABID97_RS06765: ABID97_RS06765 - GNAT family N-acetyltransferase, at 1,426,537 to 1,427,076
_RS06765
Position (kb) 1424
1425
1426 Strain fitness (log2 ratio) -1
0
1 at 1423.593 kb on - strand, within ABID97_RS06750 at 1423.643 kb on + strand, within ABID97_RS06750 at 1423.644 kb on - strand, within ABID97_RS06750 at 1423.655 kb on + strand, within ABID97_RS06750 at 1423.656 kb on - strand, within ABID97_RS06750 at 1423.753 kb on - strand, within ABID97_RS06750 at 1424.190 kb on - strand, within ABID97_RS06750 at 1424.190 kb on - strand, within ABID97_RS06750 at 1424.190 kb on - strand, within ABID97_RS06750 at 1424.585 kb on - strand at 1424.622 kb on + strand at 1424.623 kb on - strand at 1424.623 kb on - strand at 1424.623 kb on - strand at 1424.782 kb on + strand, within ABID97_RS06755 at 1424.800 kb on + strand, within ABID97_RS06755 at 1424.800 kb on + strand, within ABID97_RS06755 at 1425.053 kb on - strand, within ABID97_RS06755 at 1425.053 kb on - strand, within ABID97_RS06755 at 1425.053 kb on - strand, within ABID97_RS06755 at 1425.409 kb on + strand, within ABID97_RS06755 at 1425.598 kb on + strand, within ABID97_RS06755 at 1425.599 kb on - strand, within ABID97_RS06755 at 1425.640 kb on + strand, within ABID97_RS06755 at 1425.640 kb on + strand, within ABID97_RS06755 at 1425.640 kb on + strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.641 kb on - strand, within ABID97_RS06755 at 1425.934 kb on - strand at 1426.323 kb on + strand, within ABID97_RS06760 at 1426.323 kb on + strand, within ABID97_RS06760 at 1426.464 kb on + strand, within ABID97_RS06760 at 1426.464 kb on + strand, within ABID97_RS06760 at 1426.465 kb on - strand, within ABID97_RS06760 at 1426.465 kb on - strand, within ABID97_RS06760 at 1426.465 kb on - strand, within ABID97_RS06760 at 1426.467 kb on + strand, within ABID97_RS06760 at 1426.467 kb on + strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.468 kb on - strand, within ABID97_RS06760 at 1426.495 kb on - strand at 1426.495 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Threonine (C) remove 1,423,593 - ABID97_RS06750 0.35 +0.8 1,423,643 + ABID97_RS06750 0.38 -0.1 1,423,644 - ABID97_RS06750 0.39 -1.0 1,423,655 + ABID97_RS06750 0.39 -0.1 1,423,656 - ABID97_RS06750 0.39 +0.6 1,423,753 - ABID97_RS06750 0.47 +0.6 1,424,190 - ABID97_RS06750 0.80 +0.4 1,424,190 - ABID97_RS06750 0.80 +0.5 1,424,190 - ABID97_RS06750 0.80 +0.1 1,424,585 - +0.8 1,424,622 + +0.0 1,424,623 - +0.3 1,424,623 - +0.3 1,424,623 - -0.2 1,424,782 + ABID97_RS06755 0.17 +0.3 1,424,800 + ABID97_RS06755 0.19 -0.6 1,424,800 + ABID97_RS06755 0.19 +0.3 1,425,053 - ABID97_RS06755 0.39 -0.2 1,425,053 - ABID97_RS06755 0.39 +1.2 1,425,053 - ABID97_RS06755 0.39 +1.5 1,425,409 + ABID97_RS06755 0.67 -0.4 1,425,598 + ABID97_RS06755 0.82 -1.1 1,425,599 - ABID97_RS06755 0.82 -0.9 1,425,640 + ABID97_RS06755 0.85 -0.3 1,425,640 + ABID97_RS06755 0.85 +0.1 1,425,640 + ABID97_RS06755 0.85 -0.2 1,425,641 - ABID97_RS06755 0.86 +0.1 1,425,641 - ABID97_RS06755 0.86 -0.3 1,425,641 - ABID97_RS06755 0.86 -0.4 1,425,641 - ABID97_RS06755 0.86 -0.0 1,425,641 - ABID97_RS06755 0.86 -0.2 1,425,641 - ABID97_RS06755 0.86 +0.1 1,425,934 - +0.6 1,426,323 + ABID97_RS06760 0.64 -0.1 1,426,323 + ABID97_RS06760 0.64 -0.1 1,426,464 + ABID97_RS06760 0.88 -0.2 1,426,464 + ABID97_RS06760 0.88 +0.9 1,426,465 - ABID97_RS06760 0.88 -0.2 1,426,465 - ABID97_RS06760 0.88 +0.3 1,426,465 - ABID97_RS06760 0.88 +0.0 1,426,467 + ABID97_RS06760 0.88 +1.3 1,426,467 + ABID97_RS06760 0.88 +0.3 1,426,468 - ABID97_RS06760 0.88 -0.2 1,426,468 - ABID97_RS06760 0.88 -0.2 1,426,468 - ABID97_RS06760 0.88 -0.0 1,426,468 - ABID97_RS06760 0.88 -0.7 1,426,468 - ABID97_RS06760 0.88 -0.8 1,426,468 - ABID97_RS06760 0.88 +1.0 1,426,495 - +0.9 1,426,495 - +0.2
Or see this region's nucleotide sequence