Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS30465

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
1,624,453	+		PFLU_RS07290	0.40	+0.3
1,624,453	+		PFLU_RS07290	0.40	+1.6
1,624,453	+		PFLU_RS07290	0.40	+0.6
1,624,649	+		PFLU_RS07290	0.67	+0.6
1,624,844	-				+0.1
1,624,880	-				+1.4
1,624,880	-				-0.7
1,624,880	-				-3.8
1,624,899	+				-0.4
1,624,899	+				-0.0
1,625,055	+				+0.5
1,625,055	+				+0.9
1,625,099	+				+0.3
1,625,099	+				+0.5
1,625,131	+				-0.7
1,625,131	+				+0.2
1,625,135	+				-0.1
1,625,184	+				+0.1
1,625,184	+				+0.0
1,625,184	+				-0.2
1,625,184	+				+0.2
1,625,184	+				+0.2
1,625,185	-				+0.6
1,625,213	+				-0.5
1,625,213	+				-0.6
1,625,214	-				+1.2
1,625,214	-				+0.2
1,625,243	+				+0.8
1,625,243	+				+0.0
1,625,243	+				-1.7
1,625,243	+				+0.4
1,625,244	-				-0.5
1,625,244	-				+0.1
1,625,244	-				-0.1
1,625,244	-				+0.6
1,625,244	-				+0.5
1,625,244	-				+0.2
1,625,253	+				-0.4
1,625,253	+				+1.9
1,625,253	+				-0.6
1,625,253	+				+0.1
1,625,253	+				+0.8
1,625,253	+				+0.6
1,625,253	+				+0.1
1,625,254	-				+0.1
1,625,254	-				+2.2
1,625,254	-				-0.7
1,625,254	-				-1.5
1,625,254	-				+0.4
1,625,254	-				+0.3
1,625,271	+				-1.3
1,625,271	+				-0.0
1,625,271	+				+0.7
1,625,272	-				-3.0
1,625,272	-				+1.6
1,625,293	+				+0.6
1,625,299	-				-0.5
1,625,325	+				+1.8
1,625,325	+				-1.4
1,625,326	-				-1.3
1,625,354	+				+0.0
1,625,354	+				-1.3
1,625,354	+				+0.1
1,625,355	+				-0.6
1,625,382	+				-0.4
1,625,382	+				+1.2
1,625,382	+				+0.6
1,625,382	+				+0.1
1,625,383	-				+1.0
1,625,383	-				+1.6
1,625,383	-				-0.4
1,625,405	+				+0.4
1,625,405	+				+1.2
1,625,406	-				-0.7
1,625,406	-				+0.4
1,625,468	+		PFLU_RS30465	0.20	-0.6
1,625,468	+		PFLU_RS30465	0.20	+1.1
1,625,468	+		PFLU_RS30465	0.20	+1.6
1,625,468	+		PFLU_RS30465	0.20	+1.8
1,625,468	+		PFLU_RS30465	0.20	-0.6
1,625,469	-		PFLU_RS30465	0.20	+0.6
1,625,469	-		PFLU_RS30465	0.20	+0.3
1,625,474	-		PFLU_RS30465	0.21	+0.7
1,625,474	-		PFLU_RS30465	0.21	+0.6
1,625,485	+		PFLU_RS30465	0.23	+0.6
1,625,485	+		PFLU_RS30465	0.23	-1.4
1,625,517	+		PFLU_RS30465	0.29	-0.1
1,625,517	+		PFLU_RS30465	0.29	+0.6
1,625,518	-		PFLU_RS30465	0.30	+0.1
1,625,570	-		PFLU_RS30465	0.40	-0.2
1,625,668	+		PFLU_RS30465	0.59	-1.4
1,625,668	+		PFLU_RS30465	0.59	+0.3
1,625,668	+		PFLU_RS30465	0.59	+0.1
1,625,669	-		PFLU_RS30465	0.59	+0.3
1,625,669	-		PFLU_RS30465	0.59	-0.4
1,625,669	-		PFLU_RS30465	0.59	-0.2
1,625,672	+		PFLU_RS30465	0.60	+0.5
1,625,673	-		PFLU_RS30465	0.60	-0.8
1,625,673	-		PFLU_RS30465	0.60	+1.8
1,625,673	-		PFLU_RS30465	0.60	+0.6
1,625,673	-		PFLU_RS30465	0.60	-0.4
1,625,698	+		PFLU_RS30465	0.65	+0.9
1,625,698	+		PFLU_RS30465	0.65	-1.2
1,625,699	-		PFLU_RS30465	0.65	-0.2
1,625,699	-		PFLU_RS30465	0.65	-0.9
1,625,745	+		PFLU_RS30465	0.74	+2.8
1,625,746	-		PFLU_RS30465	0.74	+1.9
1,625,779	+		PFLU_RS30465	0.81	+0.4
1,625,779	+		PFLU_RS30465	0.81	+1.1
1,625,779	+		PFLU_RS30465	0.81	+0.3
1,625,779	+		PFLU_RS30465	0.81	-1.7
1,625,779	+		PFLU_RS30465	0.81	-0.1
1,625,779	+		PFLU_RS30465	0.81	+0.9
1,625,779	+		PFLU_RS30465	0.81	+0.1
1,625,779	+		PFLU_RS30465	0.81	+0.1
1,625,779	+		PFLU_RS30465	0.81	+0.6
1,625,779	+		PFLU_RS30465	0.81	-0.3
1,625,779	+		PFLU_RS30465	0.81	-1.8
1,625,779	+		PFLU_RS30465	0.81	-0.4
1,625,779	+		PFLU_RS30465	0.81	-0.1
1,625,779	+		PFLU_RS30465	0.81	-1.9
1,625,780	-		PFLU_RS30465	0.81	+1.5
1,625,780	-		PFLU_RS30465	0.81	+2.3
1,625,780	-		PFLU_RS30465	0.81	-0.8
1,625,780	-		PFLU_RS30465	0.81	-0.5
1,625,780	-		PFLU_RS30465	0.81	-0.1
1,625,780	-		PFLU_RS30465	0.81	+0.3
1,625,780	-		PFLU_RS30465	0.81	+1.4
1,625,780	-		PFLU_RS30465	0.81	-1.2
1,625,780	-		PFLU_RS30465	0.81	+0.6
1,625,780	-		PFLU_RS30465	0.81	+1.4
1,625,780	-		PFLU_RS30465	0.81	+0.3
1,625,780	-		PFLU_RS30465	0.81	-0.4
1,625,780	-		PFLU_RS30465	0.81	+0.2
1,625,780	-		PFLU_RS30465	0.81	-0.4
1,625,807	+		PFLU_RS30465	0.86	-0.4
1,625,807	+		PFLU_RS30465	0.86	+0.7
1,625,867	+				+0.7
1,625,867	+				-0.1
1,625,947	+				+1.4
1,625,977	+				+0.4
1,625,977	+				+0.1
1,625,977	+				+0.2
1,625,977	+				+0.8
1,625,977	+				-0.1
1,625,977	+				+1.1
1,625,977	+				+1.0
1,625,978	-				+1.1
1,625,978	-				-0.2
1,625,978	-				-0.2
1,625,978	-				+2.0
1,625,978	-				-2.1
1,626,068	+				+0.9
1,626,068	+				+2.5
1,626,068	+				-1.2
1,626,068	+				-0.5
1,626,068	+				-0.7
1,626,068	+				+0.9
1,626,068	+				+0.2
1,626,068	+				-1.2
1,626,069	-				-0.6
1,626,069	-				+0.5
1,626,069	-				-1.2
1,626,069	-				+1.1
1,626,069	-				-1.2
1,626,069	-				+0.4
1,626,069	-				+1.3
1,626,069	-				+1.6
1,626,069	-				+0.3
1,626,069	-				+0.9
1,626,069	-				+1.1
1,626,074	+				+0.8
1,626,074	+				-0.2
1,626,074	+				-0.6
1,626,094	+				+1.4
1,626,095	-				+0.4
1,626,139	+				+0.4
1,626,140	-				-0.6
1,626,151	+				+0.1
1,626,152	-				-0.1
1,626,187	+				-1.2
1,626,187	+				+0.6
1,626,187	+				-0.4
1,626,188	-				-1.6
1,626,188	-				+0.5
1,626,188	-				+0.6
1,626,188	-				+0.8
1,626,188	-				-0.5
1,626,256	-		PFLU_RS07305	0.14	-0.0
1,626,275	+		PFLU_RS07305	0.16	+0.5
1,626,276	-		PFLU_RS07305	0.16	+1.4
1,626,312	+		PFLU_RS07305	0.19	+0.8
1,626,312	+		PFLU_RS07305	0.19	+1.0
1,626,312	+		PFLU_RS07305	0.19	+1.1
1,626,312	+		PFLU_RS07305	0.19	-0.8
1,626,313	-		PFLU_RS07305	0.19	-1.0
1,626,313	-		PFLU_RS07305	0.19	+0.0
1,626,313	-		PFLU_RS07305	0.19	+0.7
1,626,314	+		PFLU_RS07305	0.19	-0.1
1,626,315	-		PFLU_RS07305	0.19	+1.0
1,626,329	+		PFLU_RS07305	0.20	+0.3
1,626,333	-		PFLU_RS07305	0.20	+2.7
1,626,427	+		PFLU_RS07305	0.28	+0.5
1,626,427	+		PFLU_RS07305	0.28	+0.2
1,626,427	+		PFLU_RS07305	0.28	+0.4
1,626,427	+		PFLU_RS07305	0.28	+1.1
1,626,428	-		PFLU_RS07305	0.28	+0.6
1,626,552	-		PFLU_RS07305	0.37	+3.2
1,626,591	+		PFLU_RS07305	0.40	+0.4
1,626,725	+		PFLU_RS07305	0.51	-3.1
1,626,726	-		PFLU_RS07305	0.51	+1.1