Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS30225

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
1,215,463	+				-1.0
1,215,463	+				-0.8
1,215,463	+				+0.6
1,215,463	+				+0.9
1,215,464	-				-0.2
1,215,464	-				-0.4
1,215,464	-				-0.1
1,215,464	-				-0.1
1,215,464	-				+0.3
1,215,464	-				-0.0
1,215,464	-				+1.0
1,215,466	+				-0.1
1,215,466	+				+0.6
1,215,467	-				+1.2
1,215,467	-				-0.3
1,215,467	-				-0.3
1,215,517	-		PFLU_RS05455	0.10	-0.3
1,215,522	+		PFLU_RS05455	0.11	-0.0
1,215,523	-		PFLU_RS05455	0.11	-0.2
1,215,541	-		PFLU_RS05455	0.13	-0.8
1,215,541	-		PFLU_RS05455	0.13	-0.7
1,215,655	+		PFLU_RS05455	0.24	-0.6
1,215,655	+		PFLU_RS05455	0.24	+0.5
1,215,656	-		PFLU_RS05455	0.24	+0.5
1,215,656	-		PFLU_RS05455	0.24	-0.9
1,215,656	-		PFLU_RS05455	0.24	+0.3
1,215,656	-		PFLU_RS05455	0.24	-0.0
1,215,656	-		PFLU_RS05455	0.24	-0.4
1,215,662	+		PFLU_RS05455	0.25	+0.0
1,215,684	+		PFLU_RS05455	0.27	+0.6
1,215,684	+		PFLU_RS05455	0.27	-2.0
1,215,685	-		PFLU_RS05455	0.27	+0.3
1,215,735	+		PFLU_RS05455	0.33	+0.6
1,215,752	+		PFLU_RS05455	0.34	+0.2
1,215,753	-		PFLU_RS05455	0.34	-1.8
1,215,755	+		PFLU_RS05455	0.35	-0.1
1,215,755	+		PFLU_RS05455	0.35	+1.3
1,215,756	-		PFLU_RS05455	0.35	-0.8
1,215,756	-		PFLU_RS05455	0.35	-0.5
1,215,756	-		PFLU_RS05455	0.35	+0.1
1,215,756	-		PFLU_RS05455	0.35	-0.5
1,215,756	-		PFLU_RS05455	0.35	-0.7
1,215,756	-		PFLU_RS05455	0.35	+0.5
1,215,756	-		PFLU_RS05455	0.35	+2.8
1,215,756	-		PFLU_RS05455	0.35	+0.7
1,215,828	+		PFLU_RS05455	0.42	+0.4
1,215,828	+		PFLU_RS05455	0.42	-0.4
1,215,828	+		PFLU_RS05455	0.42	-0.4
1,215,828	+		PFLU_RS05455	0.42	+0.3
1,215,829	-		PFLU_RS05455	0.42	+1.1
1,215,829	-		PFLU_RS05455	0.42	+0.6
1,215,836	+		PFLU_RS05455	0.43	-0.1
1,215,836	+		PFLU_RS05455	0.43	+0.5
1,215,836	+		PFLU_RS05455	0.43	+0.7
1,215,837	-		PFLU_RS05455	0.43	-0.2
1,215,837	-		PFLU_RS05455	0.43	+0.9
1,215,837	-		PFLU_RS05455	0.43	+0.5
1,215,838	+		PFLU_RS05455	0.43	+0.4
1,215,838	+		PFLU_RS05455	0.43	-0.5
1,215,838	+		PFLU_RS05455	0.43	+0.1
1,215,838	+		PFLU_RS05455	0.43	+0.2
1,215,838	+		PFLU_RS05455	0.43	+2.1
1,215,838	+		PFLU_RS05455	0.43	+0.2
1,215,839	-		PFLU_RS05455	0.43	+0.7
1,215,839	-		PFLU_RS05455	0.43	-0.4
1,215,839	-		PFLU_RS05455	0.43	+0.3
1,215,839	-		PFLU_RS05455	0.43	+0.4
1,215,843	+		PFLU_RS05455	0.44	-0.1
1,215,843	+		PFLU_RS05455	0.44	-0.6
1,215,844	-		PFLU_RS05455	0.44	-0.2
1,215,847	-		PFLU_RS05455	0.44	-1.0
1,215,847	-		PFLU_RS05455	0.44	+0.3
1,215,926	+		PFLU_RS05455	0.52	-0.6
1,215,926	+		PFLU_RS05455	0.52	-1.6
1,215,926	+		PFLU_RS05455	0.52	+1.3
1,215,927	-		PFLU_RS05455	0.52	-0.5
1,215,927	-		PFLU_RS05455	0.52	-1.2
1,215,927	-		PFLU_RS05455	0.52	+0.4
1,215,927	-		PFLU_RS05455	0.52	+1.0
1,215,927	-		PFLU_RS05455	0.52	+0.3
1,215,927	-		PFLU_RS05455	0.52	-0.2
1,215,959	+		PFLU_RS05455	0.56	+1.4
1,215,959	+		PFLU_RS05455	0.56	+1.3
1,215,974	-		PFLU_RS05455	0.57	-0.4
1,215,974	-		PFLU_RS05455	0.57	+0.4
1,216,012	+		PFLU_RS05455	0.61	+0.1
1,216,012	+		PFLU_RS05455	0.61	-0.1
1,216,012	+		PFLU_RS05455	0.61	+0.3
1,216,013	-		PFLU_RS05455	0.61	-0.4
1,216,013	-		PFLU_RS05455	0.61	+0.2
1,216,013	-		PFLU_RS05455	0.61	+1.2
1,216,013	-		PFLU_RS05455	0.61	-0.4
1,216,044	+		PFLU_RS05455	0.64	-0.5
1,216,044	+		PFLU_RS05455	0.64	-0.1
1,216,044	+		PFLU_RS05455	0.64	-0.5
1,216,044	+		PFLU_RS05455	0.64	+0.0
1,216,044	+		PFLU_RS05455	0.64	-0.2
1,216,044	+		PFLU_RS05455	0.64	+0.0
1,216,045	-		PFLU_RS05455	0.64	+0.1
1,216,045	-		PFLU_RS05455	0.64	-0.3
1,216,045	-		PFLU_RS05455	0.64	-0.5
1,216,045	-		PFLU_RS05455	0.64	-0.1
1,216,045	-		PFLU_RS05455	0.64	+1.1
1,216,045	-		PFLU_RS05455	0.64	+0.6
1,216,109	+		PFLU_RS05455	0.71	+0.2
1,216,109	+		PFLU_RS05455	0.71	-2.1
1,216,109	+		PFLU_RS05455	0.71	-1.2
1,216,109	+		PFLU_RS05455	0.71	-0.6
1,216,109	+		PFLU_RS05455	0.71	-0.8
1,216,109	+		PFLU_RS05455	0.71	+1.0
1,216,109	+		PFLU_RS05455	0.71	-0.1
1,216,110	-		PFLU_RS05455	0.71	+0.2
1,216,110	-		PFLU_RS05455	0.71	+0.3
1,216,110	-		PFLU_RS05455	0.71	+0.6
1,216,110	-		PFLU_RS05455	0.71	-1.4
1,216,110	-		PFLU_RS05455	0.71	-1.1
1,216,110	-		PFLU_RS05455	0.71	-1.1
1,216,132	+		PFLU_RS05455	0.73	-0.4
1,216,133	-		PFLU_RS05455	0.73	-0.1
1,216,154	+		PFLU_RS05455	0.76	-0.7
1,216,154	+		PFLU_RS05455	0.76	-0.2
1,216,154	+		PFLU_RS05455	0.76	+0.0
1,216,154	+		PFLU_RS05455	0.76	+0.5
1,216,154	+		PFLU_RS05455	0.76	+0.6
1,216,154	+		PFLU_RS05455	0.76	-1.3
1,216,154	+		PFLU_RS05455	0.76	+0.4
1,216,154	+		PFLU_RS05455	0.76	+0.8
1,216,154	+		PFLU_RS05455	0.76	-0.1
1,216,154	+		PFLU_RS05455	0.76	-0.3
1,216,154	+		PFLU_RS05455	0.76	-1.0
1,216,154	+		PFLU_RS05455	0.76	+0.6
1,216,154	+		PFLU_RS05455	0.76	+0.3
1,216,155	-		PFLU_RS05455	0.76	-1.0
1,216,155	-		PFLU_RS05455	0.76	-0.7
1,216,155	-		PFLU_RS05455	0.76	-1.5
1,216,155	-		PFLU_RS05455	0.76	+0.2
1,216,155	-		PFLU_RS05455	0.76	+0.5
1,216,155	-		PFLU_RS05455	0.76	-1.0
1,216,155	-		PFLU_RS05455	0.76	+0.1
1,216,155	-		PFLU_RS05455	0.76	+0.8
1,216,388	+				+0.2
1,216,409	+				+0.2
1,216,468	+				-2.0
1,216,468	+				+0.1
1,216,469	-				+0.9
1,216,469	-				-1.2
1,216,537	+				+0.0
1,216,538	-				+0.1
1,216,538	-				+0.0
1,216,558	+		PFLU_RS30225	0.10	+0.1
1,216,558	+		PFLU_RS30225	0.10	-0.4
1,216,558	+		PFLU_RS30225	0.10	-1.0
1,216,558	+		PFLU_RS30225	0.10	-0.2
1,216,558	+		PFLU_RS30225	0.10	-0.2
1,216,558	+		PFLU_RS30225	0.10	+0.3
1,216,558	+		PFLU_RS30225	0.10	+0.1
1,216,558	+		PFLU_RS30225	0.10	+0.2
1,216,558	+		PFLU_RS30225	0.10	-1.0
1,216,559	-		PFLU_RS30225	0.10	-0.8
1,216,559	-		PFLU_RS30225	0.10	+0.7
1,216,559	-		PFLU_RS30225	0.10	-1.6
1,216,559	-		PFLU_RS30225	0.10	+0.2
1,216,559	-		PFLU_RS30225	0.10	+0.5
1,216,559	-		PFLU_RS30225	0.10	-0.2
1,216,559	-		PFLU_RS30225	0.10	+0.8
1,216,559	-		PFLU_RS30225	0.10	+0.2
1,216,559	-		PFLU_RS30225	0.10	-0.4
1,216,559	-		PFLU_RS30225	0.10	-0.5
1,216,559	-		PFLU_RS30225	0.10	-0.7
1,216,559	-		PFLU_RS30225	0.10	-0.8
1,216,561	+		PFLU_RS30225	0.11	-0.2
1,216,562	-		PFLU_RS30225	0.11	+0.5
1,216,573	+		PFLU_RS30225	0.12	-0.3
1,216,573	+		PFLU_RS30225	0.12	+0.1
1,216,573	+		PFLU_RS30225	0.12	-0.5
1,216,574	-		PFLU_RS30225	0.12	+0.3
1,216,574	-		PFLU_RS30225	0.12	-1.1
1,216,579	+		PFLU_RS30225	0.13	-0.4
1,216,580	-		PFLU_RS30225	0.13	-0.7
1,216,580	-		PFLU_RS30225	0.13	+0.6
1,216,653	-		PFLU_RS30225	0.20	-2.1
1,216,695	+		PFLU_RS30225	0.25	+0.6
1,216,695	+		PFLU_RS30225	0.25	+0.6
1,216,695	+		PFLU_RS30225	0.25	-0.4
1,216,696	-		PFLU_RS30225	0.25	+1.0
1,216,696	-		PFLU_RS30225	0.25	-0.2
1,216,696	-		PFLU_RS30225	0.25	-0.8
1,216,696	-		PFLU_RS30225	0.25	+0.5
1,216,774	+		PFLU_RS30225	0.33	+0.7
1,216,775	-		PFLU_RS30225	0.33	+1.6
1,216,814	-		PFLU_RS30225	0.37	-0.1
1,216,814	-		PFLU_RS30225	0.37	+0.2
1,216,841	+		PFLU_RS30225	0.40	-0.4
1,216,842	-		PFLU_RS30225	0.40	-0.2
1,216,843	+		PFLU_RS30225	0.40	+0.2
1,216,843	+		PFLU_RS30225	0.40	+0.6
1,216,844	-		PFLU_RS30225	0.40	-0.3
1,216,844	-		PFLU_RS30225	0.40	-2.1
1,216,844	-		PFLU_RS30225	0.40	+1.0
1,216,844	-		PFLU_RS30225	0.40	-0.4
1,216,869	+		PFLU_RS30225	0.43	+0.0
1,216,869	+		PFLU_RS30225	0.43	+3.1
1,216,870	-		PFLU_RS30225	0.43	+0.0
1,216,870	-		PFLU_RS30225	0.43	-2.0
1,216,871	+		PFLU_RS30225	0.43	+0.6
1,216,871	+		PFLU_RS30225	0.43	-0.0
1,216,871	+		PFLU_RS30225	0.43	+0.1
1,216,872	-		PFLU_RS30225	0.43	+0.2
1,216,884	-		PFLU_RS30225	0.44	-0.6
1,216,992	+		PFLU_RS30225	0.55	+0.5
1,216,992	+		PFLU_RS30225	0.55	+0.4
1,216,992	+		PFLU_RS30225	0.55	-0.3
1,216,992	+		PFLU_RS30225	0.55	-0.2
1,216,993	-		PFLU_RS30225	0.55	-1.2
1,216,993	-		PFLU_RS30225	0.55	+0.0
1,217,045	+		PFLU_RS30225	0.61	-1.6
1,217,045	+		PFLU_RS30225	0.61	-0.3
1,217,045	+		PFLU_RS30225	0.61	-0.3
1,217,045	+		PFLU_RS30225	0.61	-1.2
1,217,046	-		PFLU_RS30225	0.61	+0.1
1,217,046	-		PFLU_RS30225	0.61	-0.2
1,217,057	-		PFLU_RS30225	0.62	+0.2
1,217,092	+		PFLU_RS30225	0.66	-1.0
1,217,093	-		PFLU_RS30225	0.66	+0.7
1,217,093	-		PFLU_RS30225	0.66	-0.2
1,217,142	+		PFLU_RS30225	0.71	-0.7
1,217,142	+		PFLU_RS30225	0.71	+0.4
1,217,142	+		PFLU_RS30225	0.71	-1.4
1,217,142	+		PFLU_RS30225	0.71	+1.2
1,217,142	+		PFLU_RS30225	0.71	+0.4
1,217,143	-		PFLU_RS30225	0.71	+1.6
1,217,143	-		PFLU_RS30225	0.71	+1.5
1,217,143	-		PFLU_RS30225	0.71	+1.2
1,217,165	+		PFLU_RS30225	0.73	+0.4
1,217,165	+		PFLU_RS30225	0.73	-2.8
1,217,166	-		PFLU_RS30225	0.73	+0.3
1,217,166	-		PFLU_RS30225	0.73	-1.5
1,217,183	+		PFLU_RS30225	0.75	+2.1
1,217,183	+		PFLU_RS30225	0.75	+0.7
1,217,183	+		PFLU_RS30225	0.75	+0.2
1,217,183	+		PFLU_RS30225	0.75	+1.2
1,217,184	-		PFLU_RS30225	0.75	+0.0
1,217,184	-		PFLU_RS30225	0.75	-0.7
1,217,184	-		PFLU_RS30225	0.75	+0.2
1,217,187	+		PFLU_RS30225	0.75	+1.3
1,217,187	+		PFLU_RS30225	0.75	+0.6
1,217,187	+		PFLU_RS30225	0.75	+0.0
1,217,187	+		PFLU_RS30225	0.75	+0.5
1,217,187	+		PFLU_RS30225	0.75	+0.7
1,217,188	-		PFLU_RS30225	0.76	+0.6
1,217,188	-		PFLU_RS30225	0.76	+0.5
1,217,188	-		PFLU_RS30225	0.76	+0.0
1,217,188	-		PFLU_RS30225	0.76	-0.9
1,217,188	-		PFLU_RS30225	0.76	-0.3
1,217,188	-		PFLU_RS30225	0.76	-1.2
1,217,188	-		PFLU_RS30225	0.76	-1.1
1,217,195	+		PFLU_RS30225	0.76	-0.2
1,217,195	+		PFLU_RS30225	0.76	-0.3
1,217,196	-		PFLU_RS30225	0.76	+3.1
1,217,245	+		PFLU_RS30225	0.81	-0.1
1,217,245	+		PFLU_RS30225	0.81	+0.8
1,217,245	+		PFLU_RS30225	0.81	-0.1
1,217,245	+		PFLU_RS30225	0.81	+1.1
1,217,245	+		PFLU_RS30225	0.81	+0.4
1,217,246	-		PFLU_RS30225	0.82	+0.6
1,217,246	-		PFLU_RS30225	0.82	+0.3
1,217,246	-		PFLU_RS30225	0.82	+0.0
1,217,426	+				-0.4
1,217,427	-				-0.6
1,217,427	-				-0.1
1,217,427	-				+0.5
1,217,427	-				-0.1
1,217,427	-				+0.5
1,217,469	-				+0.5
1,217,469	-				-1.5
1,217,469	-				-0.4
1,217,594	+				+0.5
1,217,595	-				+3.8
1,217,595	-				-0.5
1,217,923	-		PFLU_RS05465	0.16	+0.8
1,217,928	+		PFLU_RS05465	0.16	-0.1
1,217,928	+		PFLU_RS05465	0.16	+0.7
1,218,128	+		PFLU_RS05465	0.23	+0.4
1,218,128	+		PFLU_RS05465	0.23	+1.8
1,218,128	+		PFLU_RS05465	0.23	-1.3
1,218,128	+		PFLU_RS05465	0.23	-0.5
1,218,129	-		PFLU_RS05465	0.23	+0.2
1,218,129	-		PFLU_RS05465	0.23	+0.8
1,218,215	-		PFLU_RS05465	0.25	+0.1
1,218,242	+		PFLU_RS05465	0.26	+0.2
1,218,242	+		PFLU_RS05465	0.26	-0.5
1,218,242	+		PFLU_RS05465	0.26	+1.1
1,218,242	+		PFLU_RS05465	0.26	-0.8
1,218,243	-		PFLU_RS05465	0.26	-0.2
1,218,243	-		PFLU_RS05465	0.26	-0.1
1,218,243	-		PFLU_RS05465	0.26	-0.5
1,218,285	+		PFLU_RS05465	0.28	-1.2
1,218,285	+		PFLU_RS05465	0.28	+0.5
1,218,285	+		PFLU_RS05465	0.28	+0.3
1,218,285	+		PFLU_RS05465	0.28	-0.9
1,218,286	-		PFLU_RS05465	0.28	+1.1
1,218,286	-		PFLU_RS05465	0.28	+0.1
1,218,286	-		PFLU_RS05465	0.28	-1.1
1,218,286	-		PFLU_RS05465	0.28	+0.6
1,218,286	-		PFLU_RS05465	0.28	+0.0
1,218,287	+		PFLU_RS05465	0.28	-0.1
1,218,287	+		PFLU_RS05465	0.28	+0.9
1,218,287	+		PFLU_RS05465	0.28	-1.0
1,218,287	+		PFLU_RS05465	0.28	+1.2
1,218,287	+		PFLU_RS05465	0.28	+0.4
1,218,287	+		PFLU_RS05465	0.28	-0.8
1,218,287	+		PFLU_RS05465	0.28	+0.7
1,218,287	+		PFLU_RS05465	0.28	+0.6
1,218,287	+		PFLU_RS05465	0.28	+0.1
1,218,288	-		PFLU_RS05465	0.28	+0.9
1,218,288	-		PFLU_RS05465	0.28	+0.4
1,218,288	-		PFLU_RS05465	0.28	-0.3
1,218,396	-		PFLU_RS05465	0.31	+1.4