Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS28390

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
6,319,950	+		PFLU_RS28385	0.48	-2.2
6,320,098	+		PFLU_RS28385	0.61	-1.9
6,320,098	+		PFLU_RS28385	0.61	-1.8
6,320,098	+		PFLU_RS28385	0.61	-3.1
6,320,098	+		PFLU_RS28385	0.61	-0.9
6,320,098	+		PFLU_RS28385	0.61	-1.1
6,320,098	+		PFLU_RS28385	0.61	-3.2
6,320,098	+		PFLU_RS28385	0.61	-2.3
6,320,098	+		PFLU_RS28385	0.61	+0.8
6,320,098	+		PFLU_RS28385	0.61	-2.5
6,320,098	+		PFLU_RS28385	0.61	-2.2
6,320,098	+		PFLU_RS28385	0.61	-1.5
6,320,099	-		PFLU_RS28385	0.61	-1.4
6,320,099	-		PFLU_RS28385	0.61	-2.7
6,320,099	-		PFLU_RS28385	0.61	-0.2
6,320,099	-		PFLU_RS28385	0.61	-1.7
6,320,099	-		PFLU_RS28385	0.61	-2.2
6,320,099	-		PFLU_RS28385	0.61	+0.3
6,320,099	-		PFLU_RS28385	0.61	-2.8
6,320,099	-		PFLU_RS28385	0.61	-0.8
6,320,161	+		PFLU_RS28385	0.67	-3.0
6,320,161	+		PFLU_RS28385	0.67	-4.1
6,320,161	+		PFLU_RS28385	0.67	-3.0
6,320,161	+		PFLU_RS28385	0.67	-2.4
6,320,161	+		PFLU_RS28385	0.67	-2.7
6,320,161	+		PFLU_RS28385	0.67	-2.8
6,320,161	+		PFLU_RS28385	0.67	-2.7
6,320,161	+		PFLU_RS28385	0.67	-1.9
6,320,162	-		PFLU_RS28385	0.67	-0.9
6,320,162	-		PFLU_RS28385	0.67	-0.8
6,320,162	-		PFLU_RS28385	0.67	-2.4
6,320,162	-		PFLU_RS28385	0.67	-1.5
6,320,162	-		PFLU_RS28385	0.67	-2.8
6,320,162	-		PFLU_RS28385	0.67	-2.7
6,320,162	-		PFLU_RS28385	0.67	-1.3
6,320,162	-		PFLU_RS28385	0.67	-1.0
6,320,189	+		PFLU_RS28385	0.69	-1.5
6,320,189	+		PFLU_RS28385	0.69	-3.1
6,320,190	-		PFLU_RS28385	0.69	-0.7
6,320,190	-		PFLU_RS28385	0.69	-2.2
6,320,197	+		PFLU_RS28385	0.70	-3.0
6,320,198	-		PFLU_RS28385	0.70	+1.0
6,320,248	+		PFLU_RS28385	0.74	-2.7
6,320,248	+		PFLU_RS28385	0.74	-3.4
6,320,248	+		PFLU_RS28385	0.74	-1.8
6,320,248	+		PFLU_RS28385	0.74	-3.7
6,320,248	+		PFLU_RS28385	0.74	-2.9
6,320,249	-		PFLU_RS28385	0.75	-1.8
6,320,249	-		PFLU_RS28385	0.75	-1.4
6,320,249	-		PFLU_RS28385	0.75	-0.5
6,320,249	-		PFLU_RS28385	0.75	-1.9
6,320,249	-		PFLU_RS28385	0.75	-0.4
6,320,249	-		PFLU_RS28385	0.75	-1.6
6,320,249	-		PFLU_RS28385	0.75	-3.0
6,320,249	-		PFLU_RS28385	0.75	-0.8
6,320,249	-		PFLU_RS28385	0.75	-2.2
6,320,249	-		PFLU_RS28385	0.75	-2.2
6,320,249	-		PFLU_RS28385	0.75	-3.5
6,320,249	-		PFLU_RS28385	0.75	-1.6
6,320,275	+		PFLU_RS28385	0.77	-3.3
6,320,275	+		PFLU_RS28385	0.77	-3.3
6,320,275	+		PFLU_RS28385	0.77	-2.8
6,320,276	-		PFLU_RS28385	0.77	-0.4
6,320,437	+				-3.9
6,320,437	+				-2.0
6,320,438	-				-3.3
6,320,438	-				+0.2
6,320,438	-				-2.4
6,320,494	+				-3.7
6,320,494	+				-2.4
6,320,494	+				-3.4
6,320,495	-				-0.9
6,320,495	-				-3.2
6,320,495	-				-1.7
6,320,515	+				-2.7
6,320,515	+				-1.5
6,320,515	+				-2.0
6,320,515	+				-1.8
6,320,515	+				-2.8
6,320,515	+				-2.8
6,320,515	+				-2.9
6,320,516	-				-1.5
6,320,516	-				-3.7
6,320,516	-				-2.9
6,320,516	-				-0.0
6,320,516	-				-0.6
6,320,516	-				-2.9
6,320,516	-				-1.6
6,320,516	-				-2.7
6,320,516	-				-1.3
6,320,516	-				-1.4
6,320,516	-				-3.1
6,320,528	+				-1.8
6,320,727	+		PFLU_RS28390	0.29	-3.7
6,320,727	+		PFLU_RS28390	0.29	-2.8
6,320,727	+		PFLU_RS28390	0.29	-2.3
6,320,850	+		PFLU_RS28390	0.49	-2.4
6,320,850	+		PFLU_RS28390	0.49	-1.4
6,320,851	-		PFLU_RS28390	0.49	-1.9
6,320,906	+		PFLU_RS28390	0.58	-3.3
6,320,906	+		PFLU_RS28390	0.58	-3.4
6,320,907	-		PFLU_RS28390	0.58	-0.4
6,320,907	-		PFLU_RS28390	0.58	+1.2
6,320,907	-		PFLU_RS28390	0.58	-0.6
6,320,907	-		PFLU_RS28390	0.58	-0.4
6,320,907	-		PFLU_RS28390	0.58	-2.7
6,320,951	+		PFLU_RS28390	0.65	-4.1
6,320,951	+		PFLU_RS28390	0.65	-1.7
6,320,952	-		PFLU_RS28390	0.65	-1.9
6,320,952	-		PFLU_RS28390	0.65	-1.4
6,320,952	-		PFLU_RS28390	0.65	-3.1
6,320,960	+		PFLU_RS28390	0.67	-1.2
6,320,960	+		PFLU_RS28390	0.67	-4.0
6,320,960	+		PFLU_RS28390	0.67	-3.6
6,320,960	+		PFLU_RS28390	0.67	-3.9
6,320,960	+		PFLU_RS28390	0.67	-4.0
6,320,961	-		PFLU_RS28390	0.67	-1.3
6,320,961	-		PFLU_RS28390	0.67	-2.6
6,320,961	-		PFLU_RS28390	0.67	-2.7
6,320,961	-		PFLU_RS28390	0.67	-0.0
6,320,961	-		PFLU_RS28390	0.67	-2.0
6,320,961	-		PFLU_RS28390	0.67	-1.2
6,320,961	-		PFLU_RS28390	0.67	-1.1
6,321,082	+		PFLU_RS28390	0.86	-4.1
6,321,083	-		PFLU_RS28390	0.86	-1.4
6,321,087	+		PFLU_RS28390	0.87	-2.5
6,321,087	+		PFLU_RS28390	0.87	-3.3
6,321,088	-		PFLU_RS28390	0.87	-1.2
6,321,088	-		PFLU_RS28390	0.87	-3.3
6,321,088	-		PFLU_RS28390	0.87	-2.7
6,321,088	-		PFLU_RS28390	0.87	+0.7
6,321,088	-		PFLU_RS28390	0.87	-1.7
6,321,088	-		PFLU_RS28390	0.87	-1.2
6,321,088	-		PFLU_RS28390	0.87	-2.3
6,321,088	-		PFLU_RS28390	0.87	-1.4
6,321,115	+				-2.2
6,321,116	-				-2.7
6,321,119	+				-1.4
6,321,119	+				-1.3
6,321,119	+				-2.2
6,321,119	+				-2.5
6,321,164	+				-0.6
6,321,164	+				+0.4
6,321,165	-				+0.3
6,321,210	+				+1.1
6,321,299	+		PFLU_RS28395	0.26	+0.3
6,321,299	+		PFLU_RS28395	0.26	+1.8
6,321,299	+		PFLU_RS28395	0.26	+0.4
6,321,300	-		PFLU_RS28395	0.26	+1.2
6,321,300	-		PFLU_RS28395	0.26	+1.1
6,321,300	-		PFLU_RS28395	0.26	+1.0
6,321,300	-		PFLU_RS28395	0.26	-0.1
6,321,300	-		PFLU_RS28395	0.26	+0.5
6,321,300	-		PFLU_RS28395	0.26	-0.0
6,321,300	-		PFLU_RS28395	0.26	+0.7
6,321,506	+		PFLU_RS28395	0.73	-1.8
6,321,506	+		PFLU_RS28395	0.73	+0.7
6,321,507	-		PFLU_RS28395	0.73	+0.7
6,321,507	-		PFLU_RS28395	0.73	+1.0
6,321,507	-		PFLU_RS28395	0.73	+0.7
6,321,518	+		PFLU_RS28395	0.76	+1.3
6,321,518	+		PFLU_RS28395	0.76	+0.4
6,321,539	+		PFLU_RS28395	0.81	+1.0
6,321,539	+		PFLU_RS28395	0.81	+1.4
6,321,540	-		PFLU_RS28395	0.81	+1.7
6,321,540	-		PFLU_RS28395	0.81	-0.2
6,321,583	+				+1.7
6,321,583	+				+0.9
6,321,583	+				+0.9
6,321,583	+				-0.7
6,321,584	-				-1.4
6,321,669	+				-0.2
6,321,670	-				+0.1
6,321,801	+		PFLU_RS28400	0.30	+0.7
6,321,801	+		PFLU_RS28400	0.30	-0.6
6,321,875	-		PFLU_RS28400	0.43	+0.5
6,321,875	-		PFLU_RS28400	0.43	+0.5
6,321,875	-		PFLU_RS28400	0.43	-0.1
6,321,887	-		PFLU_RS28400	0.45	+0.3
6,322,116	+		PFLU_RS28400	0.83	-0.6
6,322,117	-		PFLU_RS28400	0.83	+1.1