Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS28140

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
6,265,146	+				+1.7
6,265,146	+				+1.2
6,265,146	+				+1.4
6,265,147	-				+0.8
6,265,166	+				-0.5
6,265,166	+				+0.8
6,265,166	+				+0.6
6,265,167	-				-2.6
6,265,167	-				+0.3
6,265,215	+				-0.7
6,265,337	+		PFLU_RS28135	0.22	-2.8
6,265,337	+		PFLU_RS28135	0.22	-0.4
6,265,338	-		PFLU_RS28135	0.22	+1.2
6,265,349	+		PFLU_RS28135	0.25	+0.4
6,265,349	+		PFLU_RS28135	0.25	-1.7
6,265,349	+		PFLU_RS28135	0.25	-1.4
6,265,349	+		PFLU_RS28135	0.25	-0.1
6,265,349	+		PFLU_RS28135	0.25	-1.1
6,265,349	+		PFLU_RS28135	0.25	-0.1
6,265,349	+		PFLU_RS28135	0.25	+0.6
6,265,349	+		PFLU_RS28135	0.25	-0.1
6,265,349	+		PFLU_RS28135	0.25	-0.5
6,265,349	+		PFLU_RS28135	0.25	+0.1
6,265,349	+		PFLU_RS28135	0.25	-0.3
6,265,349	+		PFLU_RS28135	0.25	-0.8
6,265,349	+		PFLU_RS28135	0.25	-0.3
6,265,350	-		PFLU_RS28135	0.25	+1.2
6,265,350	-		PFLU_RS28135	0.25	+0.7
6,265,350	-		PFLU_RS28135	0.25	-0.6
6,265,350	-		PFLU_RS28135	0.25	+0.8
6,265,350	-		PFLU_RS28135	0.25	+0.9
6,265,350	-		PFLU_RS28135	0.25	-0.3
6,265,350	-		PFLU_RS28135	0.25	+0.0
6,265,350	-		PFLU_RS28135	0.25	-0.2
6,265,350	-		PFLU_RS28135	0.25	+0.2
6,265,350	-		PFLU_RS28135	0.25	+0.8
6,265,350	-		PFLU_RS28135	0.25	-1.4
6,265,350	-		PFLU_RS28135	0.25	-0.0
6,265,350	-		PFLU_RS28135	0.25	-1.3
6,265,369	-		PFLU_RS28135	0.30	-2.0
6,265,592	+		PFLU_RS28135	0.88	-0.0
6,265,592	+		PFLU_RS28135	0.88	+0.5
6,265,592	+		PFLU_RS28135	0.88	-0.2
6,265,593	-		PFLU_RS28135	0.88	+1.2
6,265,593	-		PFLU_RS28135	0.88	+1.0
6,265,593	-		PFLU_RS28135	0.88	+0.8
6,265,654	+				+0.3
6,265,666	+				-0.1
6,265,691	+				-0.9
6,265,692	-				-1.6
6,265,692	-				-0.5
6,265,751	+				+0.1
6,265,751	+				-0.9
6,265,752	-				+0.9
6,265,892	+				-1.0
6,265,892	+				+0.5
6,265,892	+				+0.4
6,265,892	+				+0.8
6,265,892	+				+0.5
6,265,892	+				+0.0
6,265,892	+				+0.2
6,265,892	+				-0.2
6,265,893	-				-0.3
6,265,893	-				+2.6
6,265,893	-				-0.5
6,265,893	-				+0.9
6,265,893	-				+0.6
6,265,893	-				-0.5
6,265,893	-				-1.5
6,265,893	-				-0.0
6,265,893	-				+1.5
6,265,893	-				+0.2
6,265,893	-				+0.7
6,265,893	-				+0.8
6,265,893	-				-0.7
6,265,893	-				+0.9
6,265,893	-				-0.5
6,265,893	-				-1.2
6,265,893	-				-0.1
6,265,893	-				+1.2
6,266,100	+		PFLU_RS28140	0.20	-0.5
6,266,100	+		PFLU_RS28140	0.20	-1.5
6,266,101	-		PFLU_RS28140	0.20	-0.6
6,266,101	-		PFLU_RS28140	0.20	-0.4
6,266,124	-		PFLU_RS28140	0.22	-0.6
6,266,142	+		PFLU_RS28140	0.24	+0.3
6,266,160	+		PFLU_RS28140	0.25	+0.7
6,266,161	-		PFLU_RS28140	0.25	+0.9
6,266,161	-		PFLU_RS28140	0.25	+0.5
6,266,195	+		PFLU_RS28140	0.28	+0.0
6,266,195	+		PFLU_RS28140	0.28	+1.7
6,266,195	+		PFLU_RS28140	0.28	-1.5
6,266,196	-		PFLU_RS28140	0.28	-0.8
6,266,196	-		PFLU_RS28140	0.28	+2.1
6,266,196	-		PFLU_RS28140	0.28	-0.1
6,266,196	-		PFLU_RS28140	0.28	+0.2
6,266,198	+		PFLU_RS28140	0.28	-0.6
6,266,198	+		PFLU_RS28140	0.28	-0.5
6,266,198	+		PFLU_RS28140	0.28	-0.3
6,266,198	+		PFLU_RS28140	0.28	-1.7
6,266,198	+		PFLU_RS28140	0.28	-2.4
6,266,198	+		PFLU_RS28140	0.28	+0.9
6,266,199	-		PFLU_RS28140	0.28	-0.2
6,266,199	-		PFLU_RS28140	0.28	+1.4
6,266,199	-		PFLU_RS28140	0.28	-0.1
6,266,199	-		PFLU_RS28140	0.28	-0.2
6,266,199	-		PFLU_RS28140	0.28	+0.6
6,266,199	-		PFLU_RS28140	0.28	+0.9
6,266,199	-		PFLU_RS28140	0.28	-2.6
6,266,199	-		PFLU_RS28140	0.28	+0.0
6,266,238	-		PFLU_RS28140	0.31	+0.2
6,266,238	-		PFLU_RS28140	0.31	+0.1
6,266,238	-		PFLU_RS28140	0.31	+0.0
6,266,238	-		PFLU_RS28140	0.31	+1.2
6,266,238	-		PFLU_RS28140	0.31	-0.1
6,266,379	+		PFLU_RS28140	0.42	+1.1
6,266,379	+		PFLU_RS28140	0.42	+0.3
6,266,379	+		PFLU_RS28140	0.42	-0.9
6,266,379	+		PFLU_RS28140	0.42	+0.0
6,266,379	+		PFLU_RS28140	0.42	-0.2
6,266,380	-		PFLU_RS28140	0.43	+1.2
6,266,380	-		PFLU_RS28140	0.43	-2.3
6,266,383	+		PFLU_RS28140	0.43	-0.2
6,266,383	+		PFLU_RS28140	0.43	+0.4
6,266,383	+		PFLU_RS28140	0.43	+1.2
6,266,383	+		PFLU_RS28140	0.43	+0.0
6,266,384	-		PFLU_RS28140	0.43	+0.5
6,266,409	+		PFLU_RS28140	0.45	-0.4
6,266,409	+		PFLU_RS28140	0.45	+0.7
6,266,409	+		PFLU_RS28140	0.45	-0.2
6,266,410	-		PFLU_RS28140	0.45	+0.7
6,266,440	+		PFLU_RS28140	0.47	+0.7
6,266,504	+		PFLU_RS28140	0.52	-0.8
6,266,504	+		PFLU_RS28140	0.52	+0.1
6,266,505	-		PFLU_RS28140	0.52	-0.5
6,266,505	-		PFLU_RS28140	0.52	+0.7
6,266,505	-		PFLU_RS28140	0.52	-0.5
6,266,505	-		PFLU_RS28140	0.52	+1.0
6,266,505	-		PFLU_RS28140	0.52	-0.2
6,266,505	-		PFLU_RS28140	0.52	+0.3
6,266,505	-		PFLU_RS28140	0.52	-0.1
6,266,505	-		PFLU_RS28140	0.52	+0.2
6,266,687	+		PFLU_RS28140	0.67	+1.8
6,266,777	-		PFLU_RS28140	0.74	-0.7
6,266,999	+				-0.4
6,266,999	+				-1.0
6,266,999	+				-0.2
6,266,999	+				+1.8
6,266,999	+				+0.4
6,266,999	+				-0.5
6,266,999	+				-1.3
6,266,999	+				+0.3
6,267,000	-				-0.1
6,267,000	-				+1.6
6,267,000	-				-0.5
6,267,000	-				-0.1
6,267,000	-				+0.2
6,267,000	-				+0.5
6,267,201	+		PFLU_RS28145	0.12	-0.1
6,267,201	+		PFLU_RS28145	0.12	-1.1
6,267,219	+		PFLU_RS28145	0.14	+1.5
6,267,219	+		PFLU_RS28145	0.14	+1.5
6,267,219	+		PFLU_RS28145	0.14	-2.5
6,267,219	+		PFLU_RS28145	0.14	+0.4
6,267,219	+		PFLU_RS28145	0.14	-1.5
6,267,220	-		PFLU_RS28145	0.14	+1.4
6,267,220	-		PFLU_RS28145	0.14	-0.3
6,267,293	+		PFLU_RS28145	0.22	+1.0
6,267,293	+		PFLU_RS28145	0.22	+1.2
6,267,293	+		PFLU_RS28145	0.22	-0.3
6,267,294	-		PFLU_RS28145	0.22	-2.2
6,267,350	+		PFLU_RS28145	0.28	-0.4
6,267,350	+		PFLU_RS28145	0.28	-1.0
6,267,350	+		PFLU_RS28145	0.28	-1.0
6,267,350	+		PFLU_RS28145	0.28	-1.3
6,267,351	-		PFLU_RS28145	0.29	+0.8
6,267,351	-		PFLU_RS28145	0.29	-0.2
6,267,351	-		PFLU_RS28145	0.29	-0.2
6,267,363	+		PFLU_RS28145	0.30	+0.8
6,267,363	+		PFLU_RS28145	0.30	-1.2
6,267,363	+		PFLU_RS28145	0.30	+0.7
6,267,363	+		PFLU_RS28145	0.30	+0.3
6,267,364	-		PFLU_RS28145	0.30	+0.3
6,267,364	-		PFLU_RS28145	0.30	+0.3
6,267,364	-		PFLU_RS28145	0.30	-1.0
6,267,364	-		PFLU_RS28145	0.30	+2.1
6,267,406	+		PFLU_RS28145	0.35	+0.2
6,267,406	+		PFLU_RS28145	0.35	+1.4
6,267,406	+		PFLU_RS28145	0.35	-1.1
6,267,545	+		PFLU_RS28145	0.50	+0.1
6,267,545	+		PFLU_RS28145	0.50	+1.0
6,267,545	+		PFLU_RS28145	0.50	-1.1
6,267,545	+		PFLU_RS28145	0.50	+0.3
6,267,545	+		PFLU_RS28145	0.50	+1.1
6,267,545	+		PFLU_RS28145	0.50	-0.3
6,267,545	+		PFLU_RS28145	0.50	+0.7
6,267,545	+		PFLU_RS28145	0.50	+0.6
6,267,545	+		PFLU_RS28145	0.50	+0.4
6,267,545	+		PFLU_RS28145	0.50	-2.1
6,267,545	+		PFLU_RS28145	0.50	+0.6
6,267,545	+		PFLU_RS28145	0.50	+1.6
6,267,545	+		PFLU_RS28145	0.50	-0.4
6,267,545	+		PFLU_RS28145	0.50	+0.1
6,267,545	+		PFLU_RS28145	0.50	+1.1
6,267,546	+		PFLU_RS28145	0.51	+0.7
6,267,546	-		PFLU_RS28145	0.51	+0.7
6,267,546	-		PFLU_RS28145	0.51	-0.7
6,267,546	-		PFLU_RS28145	0.51	-0.3
6,267,546	-		PFLU_RS28145	0.51	-1.7
6,267,546	-		PFLU_RS28145	0.51	+1.3
6,267,546	-		PFLU_RS28145	0.51	-0.2
6,267,546	-		PFLU_RS28145	0.51	+0.1
6,267,546	-		PFLU_RS28145	0.51	-2.0
6,267,546	-		PFLU_RS28145	0.51	-0.0
6,267,546	-		PFLU_RS28145	0.51	+1.7
6,267,546	-		PFLU_RS28145	0.51	+0.5
6,267,546	-		PFLU_RS28145	0.51	-0.5
6,267,546	-		PFLU_RS28145	0.51	-1.4
6,267,546	-		PFLU_RS28145	0.51	-0.6
6,267,602	-		PFLU_RS28145	0.57	+0.9
6,267,622	+		PFLU_RS28145	0.59	+0.5
6,267,741	+		PFLU_RS28145	0.73	-0.7
6,267,741	+		PFLU_RS28145	0.73	+0.2
6,267,741	+		PFLU_RS28145	0.73	-0.8
6,267,742	-		PFLU_RS28145	0.73	-0.1
6,267,876	+		PFLU_RS28145	0.88	+0.2
6,267,876	+		PFLU_RS28145	0.88	+0.8
6,267,876	+		PFLU_RS28145	0.88	+0.4
6,267,876	+		PFLU_RS28145	0.88	-0.3
6,268,000	+				+0.5
6,268,000	+				+0.1
6,268,001	-				+0.2
6,268,012	+				+0.5
6,268,012	+				+0.4
6,268,013	-				+0.2
6,268,013	-				-1.5
6,268,013	-				+0.0
6,268,013	-				-1.5
6,268,016	+				+0.4
6,268,016	+				-0.5
6,268,017	-				+0.9
6,268,034	+				-0.6
6,268,034	+				+0.5
6,268,034	+				+1.7
6,268,034	+				+2.0
6,268,034	+				-1.0
6,268,034	+				-0.6
6,268,034	+				+0.4
6,268,035	-				+0.5
6,268,035	-				-0.2
6,268,035	-				-0.3
6,268,035	-				+0.1
6,268,035	-				+0.4
6,268,057	+				+0.5
6,268,057	+				+0.4
6,268,057	+				-0.0
6,268,058	-				-1.7
6,268,058	-				+1.2
6,268,058	-				-0.3
6,268,058	-				+0.5