Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS22705

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
5,112,131	-		PFLU_RS22695	0.79	+0.6
5,112,131	-		PFLU_RS22695	0.79	-1.9
5,112,131	-		PFLU_RS22695	0.79	-1.5
5,112,131	-		PFLU_RS22695	0.79	-0.2
5,112,278	+				+0.8
5,112,332	+				+1.6
5,112,333	-				-0.1
5,112,437	+				-1.5
5,112,437	+				+0.5
5,112,437	+				-0.8
5,112,437	+				+0.3
5,112,437	+				-1.5
5,112,437	+				-0.2
5,112,437	+				-1.4
5,112,437	+				+0.5
5,112,437	+				+0.4
5,112,438	-				+0.9
5,112,438	-				-1.0
5,112,438	-				+0.0
5,112,438	-				+0.1
5,112,468	+				-1.4
5,112,468	+				+1.0
5,112,468	+				+1.1
5,112,468	+				-0.7
5,112,468	+				+0.8
5,112,468	+				+0.7
5,112,468	+				-0.4
5,112,469	-				+0.6
5,112,469	-				+0.1
5,112,469	-				-0.5
5,112,469	-				+0.7
5,112,469	-				-0.2
5,112,469	-				-1.4
5,112,469	-				+0.0
5,112,469	-				-0.3
5,112,501	+				+1.2
5,112,502	-				-0.6
5,112,502	-				-1.2
5,112,551	-				-0.3
5,112,583	-				-0.7
5,112,583	-				-0.3
5,112,626	+		PFLU_RS22700	0.14	-1.2
5,112,626	+		PFLU_RS22700	0.14	-1.0
5,112,626	+		PFLU_RS22700	0.14	-1.8
5,112,627	-		PFLU_RS22700	0.14	+1.0
5,112,627	-		PFLU_RS22700	0.14	+0.1
5,112,642	-		PFLU_RS22700	0.17	-0.2
5,112,642	-		PFLU_RS22700	0.17	+0.1
5,112,768	-		PFLU_RS22700	0.41	-0.8
5,112,768	-		PFLU_RS22700	0.41	+0.5
5,112,768	-		PFLU_RS22700	0.41	-2.9
5,112,768	-		PFLU_RS22700	0.41	-0.1
5,112,768	-		PFLU_RS22700	0.41	-0.4
5,112,851	+		PFLU_RS22700	0.56	+0.6
5,112,851	+		PFLU_RS22700	0.56	+0.2
5,112,852	-		PFLU_RS22700	0.56	-0.2
5,112,852	-		PFLU_RS22700	0.56	+0.9
5,112,852	-		PFLU_RS22700	0.56	-2.1
5,112,852	-		PFLU_RS22700	0.56	-0.9
5,112,875	+		PFLU_RS22700	0.61	-0.4
5,112,875	+		PFLU_RS22700	0.61	+0.6
5,112,875	+		PFLU_RS22700	0.61	-0.4
5,112,875	+		PFLU_RS22700	0.61	+0.4
5,112,875	+		PFLU_RS22700	0.61	-0.1
5,112,875	+		PFLU_RS22700	0.61	-0.7
5,112,875	+		PFLU_RS22700	0.61	+0.2
5,112,876	-		PFLU_RS22700	0.61	+0.2
5,112,876	-		PFLU_RS22700	0.61	+0.5
5,112,876	-		PFLU_RS22700	0.61	-0.5
5,112,876	-		PFLU_RS22700	0.61	-0.2
5,112,876	-		PFLU_RS22700	0.61	-0.6
5,112,876	-		PFLU_RS22700	0.61	-1.7
5,112,925	-		PFLU_RS22700	0.70	+0.3
5,112,925	-		PFLU_RS22700	0.70	-0.1
5,113,030	+		PFLU_RS22700	0.90	-0.3
5,113,030	+		PFLU_RS22700	0.90	+0.8
5,113,030	+		PFLU_RS22700	0.90	-0.1
5,113,030	+		PFLU_RS22700	0.90	+0.1
5,113,030	+		PFLU_RS22700	0.90	+0.2
5,113,030	+		PFLU_RS22700	0.90	+0.0
5,113,030	+		PFLU_RS22700	0.90	+0.4
5,113,031	-				+0.8
5,113,031	-				+1.0
5,113,031	-				+0.2
5,113,031	-				+0.9
5,113,031	-				-1.3
5,113,031	-				-0.3
5,113,034	+				+0.4
5,113,034	+				-3.2
5,113,034	+				-0.1
5,113,034	+				+0.6
5,113,034	+				-1.2
5,113,034	+				+0.9
5,113,035	-				-2.2
5,113,035	-				-1.3
5,113,035	-				-0.4
5,113,035	-				+0.3
5,113,035	-				+0.5
5,113,073	-				+0.1
5,113,082	+				+0.6
5,113,146	+				+0.1
5,113,147	-				+0.0
5,113,147	-				+0.1
5,113,163	-				-0.5
5,113,326	+		PFLU_RS22705	0.15	+0.5
5,113,339	+		PFLU_RS22705	0.16	-1.4
5,113,339	+		PFLU_RS22705	0.16	+0.2
5,113,339	+		PFLU_RS22705	0.16	-0.4
5,113,340	-		PFLU_RS22705	0.16	-0.1
5,113,420	+		PFLU_RS22705	0.22	-1.7
5,113,420	+		PFLU_RS22705	0.22	-0.7
5,113,423	+		PFLU_RS22705	0.22	+0.2
5,113,578	+		PFLU_RS22705	0.32	-0.7
5,113,578	+		PFLU_RS22705	0.32	-0.4
5,113,578	+		PFLU_RS22705	0.32	-1.0
5,113,579	-		PFLU_RS22705	0.32	-0.2
5,113,581	+		PFLU_RS22705	0.32	-0.1
5,113,654	-		PFLU_RS22705	0.37	+0.7
5,113,692	+		PFLU_RS22705	0.39	+1.4
5,113,692	+		PFLU_RS22705	0.39	+0.7
5,113,692	+		PFLU_RS22705	0.39	-0.5
5,113,693	-		PFLU_RS22705	0.39	-1.2
5,113,693	-		PFLU_RS22705	0.39	-1.3
5,113,722	+		PFLU_RS22705	0.41	-0.2
5,113,723	-		PFLU_RS22705	0.41	-0.8
5,113,723	-		PFLU_RS22705	0.41	-0.1
5,113,723	-		PFLU_RS22705	0.41	-0.9
5,113,723	-		PFLU_RS22705	0.41	-0.3
5,113,723	-		PFLU_RS22705	0.41	-1.2
5,113,798	+		PFLU_RS22705	0.46	+0.2
5,113,798	+		PFLU_RS22705	0.46	-1.7
5,113,799	-		PFLU_RS22705	0.46	-1.8
5,113,799	-		PFLU_RS22705	0.46	+0.1
5,113,799	-		PFLU_RS22705	0.46	-0.7
5,113,799	-		PFLU_RS22705	0.46	-0.4
5,113,799	-		PFLU_RS22705	0.46	+0.2
5,113,990	+		PFLU_RS22705	0.59	-1.1
5,113,999	+		PFLU_RS22705	0.59	-1.2
5,114,185	-		PFLU_RS22705	0.71	-0.3
5,114,215	+		PFLU_RS22705	0.73	-0.8
5,114,311	-		PFLU_RS22705	0.80	-1.5
5,114,439	+		PFLU_RS22705	0.88	+0.5
5,114,439	+		PFLU_RS22705	0.88	-1.2
5,114,494	+				-0.7
5,114,494	+				-0.5
5,114,494	+				-0.1
5,114,495	-				-1.3
5,114,495	-				+0.2
5,114,495	-				-1.6
5,114,495	-				+0.4
5,114,495	-				-0.5
5,114,620	+				+0.7
5,114,621	-				-0.5
5,114,697	+				-1.0
5,114,697	+				-0.1
5,114,697	+				-0.5
5,114,697	+				-1.8
5,114,697	+				+1.0
5,114,698	-				+0.6
5,114,698	-				-0.3
5,114,698	-				-2.8
5,114,709	+				+0.4
5,114,709	+				-0.0
5,114,709	+				+0.1
5,114,709	+				+1.3
5,114,710	-				-0.4
5,114,710	-				-0.6
5,114,800	-		PFLU_RS22710	0.18	-0.9
5,114,846	+		PFLU_RS22710	0.23	-0.0
5,115,012	+		PFLU_RS22710	0.40	-1.1
5,115,012	+		PFLU_RS22710	0.40	+0.6
5,115,012	+		PFLU_RS22710	0.40	-1.1
5,115,012	+		PFLU_RS22710	0.40	+0.9
5,115,013	-		PFLU_RS22710	0.40	-0.2
5,115,013	-		PFLU_RS22710	0.40	-0.7
5,115,013	-		PFLU_RS22710	0.40	-1.3
5,115,013	-		PFLU_RS22710	0.40	-1.3
5,115,090	+		PFLU_RS22710	0.47	-1.9
5,115,090	+		PFLU_RS22710	0.47	+0.3
5,115,090	+		PFLU_RS22710	0.47	-0.3
5,115,090	+		PFLU_RS22710	0.47	-1.6
5,115,090	+		PFLU_RS22710	0.47	-0.6
5,115,090	+		PFLU_RS22710	0.47	-1.5
5,115,090	+		PFLU_RS22710	0.47	+0.2
5,115,090	+		PFLU_RS22710	0.47	-0.7
5,115,091	-		PFLU_RS22710	0.48	+0.0
5,115,091	-		PFLU_RS22710	0.48	-1.1
5,115,091	-		PFLU_RS22710	0.48	-0.9
5,115,091	-		PFLU_RS22710	0.48	+0.6
5,115,091	-		PFLU_RS22710	0.48	-0.9
5,115,091	-		PFLU_RS22710	0.48	-0.4
5,115,354	+		PFLU_RS22710	0.74	-1.1
5,115,354	+		PFLU_RS22710	0.74	-0.0
5,115,354	+		PFLU_RS22710	0.74	-0.7
5,115,355	-		PFLU_RS22710	0.74	+0.2
5,115,355	-		PFLU_RS22710	0.74	+0.5
5,115,355	-		PFLU_RS22710	0.74	+0.4
5,115,375	+		PFLU_RS22710	0.76	-1.2
5,115,375	+		PFLU_RS22710	0.76	+0.7
5,115,376	-		PFLU_RS22710	0.76	-0.5
5,115,378	-		PFLU_RS22710	0.77	-0.4
5,115,378	-		PFLU_RS22710	0.77	+0.3
5,115,587	+				-0.1
5,115,588	-				-0.3