Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS21970

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
4,945,633	+		PFLU_RS21965	0.28	-0.5
4,945,633	+		PFLU_RS21965	0.28	+0.3
4,945,633	+		PFLU_RS21965	0.28	-1.7
4,945,633	+		PFLU_RS21965	0.28	-2.2
4,945,633	+		PFLU_RS21965	0.28	-1.4
4,945,633	+		PFLU_RS21965	0.28	-1.0
4,945,633	+		PFLU_RS21965	0.28	+1.5
4,945,634	-		PFLU_RS21965	0.29	-1.1
4,945,634	-		PFLU_RS21965	0.29	-0.5
4,945,634	-		PFLU_RS21965	0.29	-0.3
4,945,634	-		PFLU_RS21965	0.29	+0.8
4,945,634	-		PFLU_RS21965	0.29	-0.8
4,945,634	-		PFLU_RS21965	0.29	+1.0
4,945,738	+		PFLU_RS21965	0.37	-0.5
4,945,738	+		PFLU_RS21965	0.37	-0.6
4,945,738	+		PFLU_RS21965	0.37	+0.2
4,945,738	+		PFLU_RS21965	0.37	-1.5
4,945,739	-		PFLU_RS21965	0.37	-1.8
4,945,739	-		PFLU_RS21965	0.37	-1.0
4,945,739	-		PFLU_RS21965	0.37	-1.8
4,945,739	-		PFLU_RS21965	0.37	-0.8
4,945,848	+		PFLU_RS21965	0.45	-2.5
4,945,873	-		PFLU_RS21965	0.47	-0.8
4,945,887	+		PFLU_RS21965	0.48	-2.4
4,945,888	-		PFLU_RS21965	0.48	-0.7
4,945,939	+		PFLU_RS21965	0.52	-0.0
4,945,939	+		PFLU_RS21965	0.52	-0.3
4,945,939	+		PFLU_RS21965	0.52	-0.5
4,945,939	+		PFLU_RS21965	0.52	-1.1
4,945,939	+		PFLU_RS21965	0.52	-1.2
4,945,939	+		PFLU_RS21965	0.52	-1.7
4,945,940	-		PFLU_RS21965	0.52	-0.5
4,945,940	-		PFLU_RS21965	0.52	-3.0
4,945,940	-		PFLU_RS21965	0.52	-1.5
4,945,940	-		PFLU_RS21965	0.52	-0.9
4,945,957	+		PFLU_RS21965	0.53	+0.5
4,945,957	+		PFLU_RS21965	0.53	-1.9
4,945,957	+		PFLU_RS21965	0.53	-0.8
4,945,957	+		PFLU_RS21965	0.53	+0.1
4,945,957	+		PFLU_RS21965	0.53	-1.6
4,945,957	+		PFLU_RS21965	0.53	-1.7
4,945,957	+		PFLU_RS21965	0.53	-1.0
4,945,958	-		PFLU_RS21965	0.54	-0.5
4,945,958	-		PFLU_RS21965	0.54	+0.2
4,945,958	-		PFLU_RS21965	0.54	+0.1
4,945,958	-		PFLU_RS21965	0.54	-1.5
4,945,958	-		PFLU_RS21965	0.54	-0.5
4,945,958	-		PFLU_RS21965	0.54	-2.0
4,945,974	+		PFLU_RS21965	0.55	-0.7
4,946,110	+		PFLU_RS21965	0.65	-0.5
4,946,110	+		PFLU_RS21965	0.65	-3.5
4,946,110	+		PFLU_RS21965	0.65	-1.6
4,946,110	+		PFLU_RS21965	0.65	-1.7
4,946,110	+		PFLU_RS21965	0.65	-0.8
4,946,110	+		PFLU_RS21965	0.65	+0.5
4,946,111	-		PFLU_RS21965	0.65	-0.5
4,946,111	-		PFLU_RS21965	0.65	-0.0
4,946,218	-		PFLU_RS21965	0.74	+1.1
4,946,218	-		PFLU_RS21965	0.74	-1.0
4,946,220	+		PFLU_RS21965	0.74	-0.5
4,946,221	-		PFLU_RS21965	0.74	-0.5
4,946,221	-		PFLU_RS21965	0.74	+0.7
4,946,221	-		PFLU_RS21965	0.74	-2.6
4,946,257	+		PFLU_RS21965	0.77	-1.3
4,946,257	+		PFLU_RS21965	0.77	-1.8
4,946,257	+		PFLU_RS21965	0.77	+0.7
4,946,257	+		PFLU_RS21965	0.77	-1.3
4,946,258	-		PFLU_RS21965	0.77	-1.0
4,946,258	-		PFLU_RS21965	0.77	-0.5
4,946,258	-		PFLU_RS21965	0.77	-1.3
4,946,258	-		PFLU_RS21965	0.77	-0.1
4,946,268	+		PFLU_RS21965	0.77	-1.5
4,946,268	+		PFLU_RS21965	0.77	-1.8
4,946,268	+		PFLU_RS21965	0.77	+0.5
4,946,268	+		PFLU_RS21965	0.77	-0.6
4,946,268	+		PFLU_RS21965	0.77	-0.3
4,946,269	-		PFLU_RS21965	0.78	-0.9
4,946,269	-		PFLU_RS21965	0.78	-0.6
4,946,269	-		PFLU_RS21965	0.78	-1.0
4,946,275	+		PFLU_RS21965	0.78	-2.3
4,946,297	+		PFLU_RS21965	0.80	-0.5
4,946,297	+		PFLU_RS21965	0.80	-0.4
4,946,297	+		PFLU_RS21965	0.80	-1.6
4,946,298	-		PFLU_RS21965	0.80	-0.8
4,946,298	-		PFLU_RS21965	0.80	-1.8
4,946,331	+		PFLU_RS21965	0.82	-0.5
4,946,341	-		PFLU_RS21965	0.83	+0.8
4,946,376	+		PFLU_RS21965	0.86	-0.7
4,946,376	+		PFLU_RS21965	0.86	-0.8
4,946,377	-		PFLU_RS21965	0.86	-1.4
4,946,415	+		PFLU_RS21965	0.89	-0.9
4,946,437	+				-1.5
4,946,438	-				+0.5
4,946,438	-				-0.5
4,946,438	-				-1.9
4,946,443	+				+0.2
4,946,444	-				-1.0
4,946,444	-				-1.2
4,946,444	-				+0.4
4,946,444	-				-0.6
4,946,497	+				-1.2
4,946,497	+				+0.0
4,946,497	+				-1.4
4,946,497	+				+0.1
4,946,497	+				-1.2
4,946,497	+				-1.5
4,946,497	+				-0.1
4,946,497	+				-0.6
4,946,497	+				-0.5
4,946,497	+				-0.5
4,946,497	+				-0.8
4,946,498	-				-1.6
4,946,498	-				-0.5
4,946,498	-				-2.4
4,946,498	-				-1.0
4,946,498	-				-1.2
4,946,498	-				-0.3
4,946,498	-				-2.3
4,946,498	-				-1.5
4,946,498	-				+0.1
4,946,509	+				-0.4
4,946,509	+				-0.8
4,946,509	+				-0.2
4,946,510	-				+0.2
4,946,548	+				-0.5
4,946,548	+				+0.9
4,946,548	+				-1.0
4,946,548	+				-0.6
4,946,548	+				-1.6
4,946,548	+				-0.5
4,946,549	-				-0.6
4,946,549	-				-3.3
4,946,549	-				+0.3
4,946,549	-				-1.4
4,946,557	+				-0.9
4,946,572	+				+0.5
4,946,613	-				-0.5
4,946,688	-		PFLU_RS21970	0.11	+0.4
4,946,688	-		PFLU_RS21970	0.11	+0.1
4,946,734	+		PFLU_RS21970	0.20	+1.1
4,946,734	+		PFLU_RS21970	0.20	+0.5
4,946,734	+		PFLU_RS21970	0.20	+0.3
4,946,734	+		PFLU_RS21970	0.20	+0.4
4,946,734	+		PFLU_RS21970	0.20	+1.1
4,946,734	+		PFLU_RS21970	0.20	+0.6
4,946,734	+		PFLU_RS21970	0.20	-0.0
4,946,734	+		PFLU_RS21970	0.20	+0.5
4,946,734	+		PFLU_RS21970	0.20	-0.8
4,946,734	+		PFLU_RS21970	0.20	-0.1
4,946,734	+		PFLU_RS21970	0.20	+0.9
4,946,734	+		PFLU_RS21970	0.20	+0.2
4,946,734	+		PFLU_RS21970	0.20	+0.7
4,946,734	+		PFLU_RS21970	0.20	-0.0
4,946,734	+		PFLU_RS21970	0.20	-0.0
4,946,734	+		PFLU_RS21970	0.20	-0.5
4,946,734	+		PFLU_RS21970	0.20	-0.7
4,946,734	+		PFLU_RS21970	0.20	+0.5
4,946,734	+		PFLU_RS21970	0.20	+0.4
4,946,734	+		PFLU_RS21970	0.20	-0.1
4,946,734	+		PFLU_RS21970	0.20	-0.5
4,946,734	+		PFLU_RS21970	0.20	-0.4
4,946,734	+		PFLU_RS21970	0.20	-0.0
4,946,734	+		PFLU_RS21970	0.20	-1.8
4,946,734	+		PFLU_RS21970	0.20	+0.1
4,946,734	+		PFLU_RS21970	0.20	-0.0
4,946,734	+		PFLU_RS21970	0.20	-0.7
4,946,734	+		PFLU_RS21970	0.20	-0.3
4,946,734	+		PFLU_RS21970	0.20	+0.7
4,946,734	+		PFLU_RS21970	0.20	-0.7
4,946,734	+		PFLU_RS21970	0.20	-0.4
4,946,735	-		PFLU_RS21970	0.20	+0.2
4,946,735	-		PFLU_RS21970	0.20	+0.3
4,946,735	-		PFLU_RS21970	0.20	-0.9
4,946,735	-		PFLU_RS21970	0.20	+0.1
4,946,735	-		PFLU_RS21970	0.20	-0.6
4,946,735	-		PFLU_RS21970	0.20	+0.5
4,946,735	-		PFLU_RS21970	0.20	+1.7
4,946,735	-		PFLU_RS21970	0.20	-2.1
4,946,735	-		PFLU_RS21970	0.20	-2.0
4,946,735	-		PFLU_RS21970	0.20	-1.2
4,946,735	-		PFLU_RS21970	0.20	-0.6
4,946,735	-		PFLU_RS21970	0.20	-0.3
4,946,735	-		PFLU_RS21970	0.20	-1.4
4,946,735	-		PFLU_RS21970	0.20	-1.6
4,946,735	-		PFLU_RS21970	0.20	+1.1
4,946,735	-		PFLU_RS21970	0.20	+0.1
4,946,741	-		PFLU_RS21970	0.21	-0.7
4,946,781	+		PFLU_RS21970	0.28	+0.7
4,946,781	+		PFLU_RS21970	0.28	-0.8
4,946,837	+		PFLU_RS21970	0.38	-0.6
4,946,838	-		PFLU_RS21970	0.39	-2.8
4,946,838	-		PFLU_RS21970	0.39	-1.6
4,946,851	+		PFLU_RS21970	0.41	-1.8
4,946,851	+		PFLU_RS21970	0.41	-0.8
4,946,852	-		PFLU_RS21970	0.41	+0.5
4,946,860	+		PFLU_RS21970	0.43	+0.0
4,946,860	+		PFLU_RS21970	0.43	-2.4
4,946,860	+		PFLU_RS21970	0.43	-1.0
4,946,860	+		PFLU_RS21970	0.43	-0.1
4,946,860	+		PFLU_RS21970	0.43	+0.3
4,946,861	-		PFLU_RS21970	0.43	+1.1
4,946,861	-		PFLU_RS21970	0.43	+0.3
4,946,861	-		PFLU_RS21970	0.43	-0.5
4,946,861	-		PFLU_RS21970	0.43	-0.4
4,946,950	+		PFLU_RS21970	0.59	-0.3
4,946,950	+		PFLU_RS21970	0.59	+0.5
4,946,950	+		PFLU_RS21970	0.59	-1.9
4,946,950	+		PFLU_RS21970	0.59	-0.4
4,946,950	+		PFLU_RS21970	0.59	+0.3
4,946,950	+		PFLU_RS21970	0.59	-0.5
4,946,951	-		PFLU_RS21970	0.59	+0.7
4,946,951	-		PFLU_RS21970	0.59	-0.3
4,946,951	-		PFLU_RS21970	0.59	-1.0
4,946,951	-		PFLU_RS21970	0.59	-1.3
4,946,959	+		PFLU_RS21970	0.61	+0.8
4,946,959	+		PFLU_RS21970	0.61	+0.2
4,946,959	+		PFLU_RS21970	0.61	-0.0
4,946,960	-		PFLU_RS21970	0.61	-0.7
4,946,960	-		PFLU_RS21970	0.61	-0.7
4,946,960	-		PFLU_RS21970	0.61	+0.1
4,946,960	-		PFLU_RS21970	0.61	-0.2
4,946,960	-		PFLU_RS21970	0.61	-0.4
4,946,960	-		PFLU_RS21970	0.61	-2.0
4,946,960	-		PFLU_RS21970	0.61	+0.4
4,946,960	-		PFLU_RS21970	0.61	+0.1
4,946,960	-		PFLU_RS21970	0.61	-1.0
4,946,960	-		PFLU_RS21970	0.61	+1.0
4,946,960	-		PFLU_RS21970	0.61	+0.5
4,947,153	+				-1.0
4,947,153	+				+0.7
4,947,154	-				-0.5
4,947,213	-				-1.6
4,947,213	-				-0.5
4,947,213	-				+0.8
4,947,300	+				-1.1
4,947,300	+				-0.3
4,947,300	+				-0.1
4,947,300	+				-2.3
4,947,301	-				-0.5
4,947,301	-				-0.5
4,947,301	-				+0.0
4,947,301	-				-0.7
4,947,304	+				+0.8
4,947,304	+				+0.4
4,947,304	+				-0.5
4,947,304	+				+0.5
4,947,304	+				-0.8
4,947,304	+				+0.8
4,947,304	+				-0.2
4,947,305	-				+0.2
4,947,305	-				+1.1
4,947,305	-				-2.9
4,947,305	-				-0.3
4,947,305	-				+0.7
4,947,305	-				-0.0
4,947,305	-				+0.9
4,947,305	-				-1.6
4,947,322	+				+0.7
4,947,387	-				-1.4
4,947,387	-				+0.4
4,947,439	+				+1.2
4,947,440	-				-1.2
4,947,440	-				-1.3
4,947,440	-				+0.8
4,947,440	-				-2.0
4,947,440	-				+1.7
4,947,440	-				+0.4
4,947,457	+		PFLU_RS21975	0.11	-0.7
4,947,457	+		PFLU_RS21975	0.11	+0.6
4,947,457	+		PFLU_RS21975	0.11	-0.2
4,947,457	+		PFLU_RS21975	0.11	-0.2
4,947,458	-		PFLU_RS21975	0.11	+2.1
4,947,458	-		PFLU_RS21975	0.11	-0.5
4,947,458	-		PFLU_RS21975	0.11	+0.4
4,947,458	-		PFLU_RS21975	0.11	+0.6
4,947,458	-		PFLU_RS21975	0.11	+0.7
4,947,458	-		PFLU_RS21975	0.11	-1.0
4,947,582	+		PFLU_RS21975	0.21	+1.1
4,947,582	+		PFLU_RS21975	0.21	+0.7
4,947,582	+		PFLU_RS21975	0.21	+0.3
4,947,625	+		PFLU_RS21975	0.25	-1.1
4,947,625	+		PFLU_RS21975	0.25	+0.9
4,947,625	+		PFLU_RS21975	0.25	-0.4
4,947,625	+		PFLU_RS21975	0.25	+0.1
4,947,625	+		PFLU_RS21975	0.25	+1.2
4,947,625	+		PFLU_RS21975	0.25	+0.5
4,947,625	+		PFLU_RS21975	0.25	-0.6
4,947,626	-		PFLU_RS21975	0.25	+0.3
4,947,688	+		PFLU_RS21975	0.30	-0.7
4,947,688	+		PFLU_RS21975	0.30	-0.3
4,947,688	+		PFLU_RS21975	0.30	+0.1
4,947,689	-		PFLU_RS21975	0.30	+1.0
4,947,689	-		PFLU_RS21975	0.30	-0.1
4,947,689	-		PFLU_RS21975	0.30	-1.7
4,947,689	-		PFLU_RS21975	0.30	+0.2
4,947,689	-		PFLU_RS21975	0.30	-0.6
4,947,745	+		PFLU_RS21975	0.35	-1.5
4,947,745	+		PFLU_RS21975	0.35	+0.1
4,947,745	+		PFLU_RS21975	0.35	+0.8
4,947,745	+		PFLU_RS21975	0.35	-0.0
4,947,745	+		PFLU_RS21975	0.35	-0.2
4,947,745	+		PFLU_RS21975	0.35	+0.3
4,947,746	-		PFLU_RS21975	0.35	+0.4
4,947,746	-		PFLU_RS21975	0.35	+0.1
4,947,746	-		PFLU_RS21975	0.35	-0.7
4,947,746	-		PFLU_RS21975	0.35	-0.6
4,947,746	-		PFLU_RS21975	0.35	-1.9
4,947,746	-		PFLU_RS21975	0.35	-0.6
4,947,759	-		PFLU_RS21975	0.36	-0.6
4,947,826	+		PFLU_RS21975	0.41	+0.7
4,947,826	+		PFLU_RS21975	0.41	+0.3
4,947,826	+		PFLU_RS21975	0.41	+0.2
4,947,827	-		PFLU_RS21975	0.41	+0.2
4,947,827	-		PFLU_RS21975	0.41	+1.5