Experiment: Trisodium citrate (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS16685 and PFLU_RS16690 are separated by 10 nucleotides PFLU_RS16690 and PFLU_RS16695 are separated by 2 nucleotides PFLU_RS16695 and PFLU_RS16700 are separated by 22 nucleotides
PFLU_RS16685: PFLU_RS16685 - AMP-binding protein, at 3,780,871 to 3,781,926
_RS16685
PFLU_RS16690: PFLU_RS16690 - ABC transporter ATP-binding protein, at 3,781,937 to 3,782,713
_RS16690
PFLU_RS16695: PFLU_RS16695 - branched-chain amino acid ABC transporter permease, at 3,782,716 to 3,783,597
_RS16695
PFLU_RS16700: PFLU_RS16700 - branched-chain amino acid ABC transporter permease, at 3,783,620 to 3,784,687
_RS16700
Position (kb)
3782
3783
3784 Strain fitness (log2 ratio)
-2
-1
0
1 at 3781.960 kb on - strand at 3781.999 kb on + strand at 3781.999 kb on + strand at 3782.000 kb on - strand at 3782.111 kb on + strand, within PFLU_RS16690 at 3782.111 kb on + strand, within PFLU_RS16690 at 3782.112 kb on - strand, within PFLU_RS16690 at 3782.400 kb on + strand, within PFLU_RS16690 at 3782.400 kb on + strand, within PFLU_RS16690 at 3782.401 kb on - strand, within PFLU_RS16690 at 3782.415 kb on - strand, within PFLU_RS16690 at 3782.634 kb on - strand, within PFLU_RS16690 at 3782.634 kb on - strand, within PFLU_RS16690 at 3782.768 kb on - strand at 3782.768 kb on - strand at 3782.800 kb on + strand at 3782.801 kb on - strand at 3782.801 kb on - strand at 3783.022 kb on + strand, within PFLU_RS16695 at 3783.023 kb on - strand, within PFLU_RS16695 at 3783.023 kb on - strand, within PFLU_RS16695 at 3783.274 kb on - strand, within PFLU_RS16695 at 3783.478 kb on + strand, within PFLU_RS16695 at 3783.479 kb on - strand, within PFLU_RS16695 at 3783.479 kb on - strand, within PFLU_RS16695 at 3783.523 kb on + strand at 3783.627 kb on - strand at 3783.627 kb on - strand at 3783.758 kb on + strand, within PFLU_RS16700 at 3783.759 kb on - strand, within PFLU_RS16700 at 3783.894 kb on - strand, within PFLU_RS16700 at 3784.013 kb on + strand, within PFLU_RS16700 at 3784.164 kb on - strand, within PFLU_RS16700 at 3784.167 kb on + strand, within PFLU_RS16700 at 3784.167 kb on + strand, within PFLU_RS16700 at 3784.167 kb on + strand, within PFLU_RS16700 at 3784.167 kb on + strand, within PFLU_RS16700 at 3784.168 kb on - strand, within PFLU_RS16700 at 3784.168 kb on - strand, within PFLU_RS16700 at 3784.168 kb on - strand, within PFLU_RS16700 at 3784.334 kb on + strand, within PFLU_RS16700 at 3784.335 kb on - strand, within PFLU_RS16700
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C); with MOPS remove 3,781,960 - -1.6 3,781,999 + -0.4 3,781,999 + +0.0 3,782,000 - +0.1 3,782,111 + PFLU_RS16690 0.22 +0.4 3,782,111 + PFLU_RS16690 0.22 -0.1 3,782,112 - PFLU_RS16690 0.23 +1.4 3,782,400 + PFLU_RS16690 0.60 -1.1 3,782,400 + PFLU_RS16690 0.60 +0.5 3,782,401 - PFLU_RS16690 0.60 -0.3 3,782,415 - PFLU_RS16690 0.62 -1.7 3,782,634 - PFLU_RS16690 0.90 +0.0 3,782,634 - PFLU_RS16690 0.90 -1.8 3,782,768 - -0.7 3,782,768 - +0.1 3,782,800 + +0.0 3,782,801 - +0.4 3,782,801 - +1.2 3,783,022 + PFLU_RS16695 0.35 -0.8 3,783,023 - PFLU_RS16695 0.35 -0.2 3,783,023 - PFLU_RS16695 0.35 -1.6 3,783,274 - PFLU_RS16695 0.63 +0.3 3,783,478 + PFLU_RS16695 0.86 -2.2 3,783,479 - PFLU_RS16695 0.87 -1.8 3,783,479 - PFLU_RS16695 0.87 +1.3 3,783,523 + -0.6 3,783,627 - +0.8 3,783,627 - +0.4 3,783,758 + PFLU_RS16700 0.13 +0.2 3,783,759 - PFLU_RS16700 0.13 +1.2 3,783,894 - PFLU_RS16700 0.26 +0.3 3,784,013 + PFLU_RS16700 0.37 -1.3 3,784,164 - PFLU_RS16700 0.51 +1.2 3,784,167 + PFLU_RS16700 0.51 -0.1 3,784,167 + PFLU_RS16700 0.51 +0.3 3,784,167 + PFLU_RS16700 0.51 +0.5 3,784,167 + PFLU_RS16700 0.51 +0.6 3,784,168 - PFLU_RS16700 0.51 +0.1 3,784,168 - PFLU_RS16700 0.51 +0.5 3,784,168 - PFLU_RS16700 0.51 +1.1 3,784,334 + PFLU_RS16700 0.67 -1.4 3,784,335 - PFLU_RS16700 0.67 +1.1
Or see this region's nucleotide sequence