Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS13480

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
3,049,954	-		PFLU_RS13475	0.52	-1.2
3,050,004	+		PFLU_RS13475	0.55	-0.1
3,050,004	+		PFLU_RS13475	0.55	-0.2
3,050,005	-		PFLU_RS13475	0.55	-0.6
3,050,005	-		PFLU_RS13475	0.55	-0.8
3,050,157	+		PFLU_RS13475	0.62	+0.3
3,050,158	-		PFLU_RS13475	0.62	+0.4
3,050,190	-		PFLU_RS13475	0.64	+1.6
3,050,190	-		PFLU_RS13475	0.64	+1.1
3,050,190	-		PFLU_RS13475	0.64	+0.4
3,050,241	+		PFLU_RS13475	0.67	+0.0
3,050,241	+		PFLU_RS13475	0.67	+0.9
3,050,241	+		PFLU_RS13475	0.67	-0.0
3,050,241	+		PFLU_RS13475	0.67	-1.8
3,050,241	+		PFLU_RS13475	0.67	-0.4
3,050,241	+		PFLU_RS13475	0.67	-0.4
3,050,242	-		PFLU_RS13475	0.67	-0.1
3,050,242	-		PFLU_RS13475	0.67	+1.0
3,050,242	-		PFLU_RS13475	0.67	-0.0
3,050,242	-		PFLU_RS13475	0.67	-0.1
3,050,242	-		PFLU_RS13475	0.67	+0.4
3,050,242	-		PFLU_RS13475	0.67	+0.5
3,050,242	-		PFLU_RS13475	0.67	-0.8
3,050,242	-		PFLU_RS13475	0.67	-0.8
3,050,242	-		PFLU_RS13475	0.67	-0.9
3,050,247	+		PFLU_RS13475	0.67	-0.7
3,050,247	+		PFLU_RS13475	0.67	-2.8
3,050,247	+		PFLU_RS13475	0.67	-1.0
3,050,247	+		PFLU_RS13475	0.67	+0.6
3,050,247	+		PFLU_RS13475	0.67	-1.1
3,050,247	+		PFLU_RS13475	0.67	-1.7
3,050,247	+		PFLU_RS13475	0.67	+0.6
3,050,247	+		PFLU_RS13475	0.67	-1.1
3,050,248	-		PFLU_RS13475	0.67	+1.2
3,050,264	+		PFLU_RS13475	0.68	-0.7
3,050,264	+		PFLU_RS13475	0.68	+0.5
3,050,264	+		PFLU_RS13475	0.68	-1.0
3,050,448	+		PFLU_RS13475	0.77	+0.0
3,050,448	+		PFLU_RS13475	0.77	+0.2
3,050,448	+		PFLU_RS13475	0.77	-0.1
3,050,448	+		PFLU_RS13475	0.77	-0.5
3,050,448	+		PFLU_RS13475	0.77	-2.6
3,050,448	+		PFLU_RS13475	0.77	-0.4
3,050,449	-		PFLU_RS13475	0.77	-0.3
3,050,449	-		PFLU_RS13475	0.77	-0.0
3,050,449	-		PFLU_RS13475	0.77	-0.6
3,050,449	-		PFLU_RS13475	0.77	-0.7
3,050,449	-		PFLU_RS13475	0.77	-0.1
3,050,499	+		PFLU_RS13475	0.80	-0.8
3,050,499	+		PFLU_RS13475	0.80	-1.2
3,050,499	+		PFLU_RS13475	0.80	-0.7
3,050,518	-		PFLU_RS13475	0.81	+0.5
3,050,518	-		PFLU_RS13475	0.81	-0.5
3,050,518	-		PFLU_RS13475	0.81	+0.1
3,050,556	-		PFLU_RS13475	0.83	+1.0
3,050,556	-		PFLU_RS13475	0.83	+0.9
3,050,556	-		PFLU_RS13475	0.83	-1.4
3,050,661	+		PFLU_RS13475	0.88	+0.2
3,050,661	+		PFLU_RS13475	0.88	+0.3
3,050,662	-		PFLU_RS13475	0.88	-0.3
3,050,662	-		PFLU_RS13475	0.88	-1.2
3,050,724	+				+0.6
3,050,724	+				-1.4
3,050,724	+				-0.2
3,050,724	+				+0.4
3,050,724	+				+0.3
3,050,724	+				-1.9
3,050,725	-				+0.6
3,050,725	-				+0.5
3,050,725	-				-1.8
3,050,725	-				+0.9
3,050,725	-				+0.6
3,050,725	-				-0.6
3,050,726	+				+0.4
3,050,832	+				+1.1
3,050,833	-				+1.5
3,050,921	+				+1.3
3,050,921	+				-1.4
3,050,922	-				-0.4
3,050,922	-				-1.9
3,050,922	-				+0.9
3,050,968	-				-0.1
3,050,987	-				+0.9
3,051,004	+				+1.3
3,051,004	+				+0.9
3,051,005	-				+0.7
3,051,025	+				+0.0
3,051,085	+				-2.6
3,051,085	+				+0.2
3,051,085	+				-0.1
3,051,085	+				-0.1
3,051,086	-				-2.3
3,051,086	-				+0.3
3,051,086	-				-2.7
3,051,131	-				+0.2
3,051,157	+				+1.1
3,051,157	+				+0.6
3,051,158	-				-0.7
3,051,173	-				+0.8
3,051,194	-				+0.5
3,051,349	+		PFLU_RS13480	0.12	-0.6
3,051,349	+		PFLU_RS13480	0.12	-0.9
3,051,349	+		PFLU_RS13480	0.12	-0.2
3,051,349	+		PFLU_RS13480	0.12	-0.3
3,051,349	+		PFLU_RS13480	0.12	+0.4
3,051,349	+		PFLU_RS13480	0.12	-1.8
3,051,349	+		PFLU_RS13480	0.12	-0.9
3,051,349	+		PFLU_RS13480	0.12	+0.9
3,051,350	-		PFLU_RS13480	0.12	-1.2
3,051,350	-		PFLU_RS13480	0.12	+0.5
3,051,350	-		PFLU_RS13480	0.12	+0.7
3,051,350	-		PFLU_RS13480	0.12	-0.7
3,051,350	-		PFLU_RS13480	0.12	-0.4
3,051,449	-		PFLU_RS13480	0.15	-0.5
3,051,731	-		PFLU_RS13480	0.24	-0.8
3,051,805	+		PFLU_RS13480	0.26	+1.1
3,051,805	+		PFLU_RS13480	0.26	-0.4
3,051,805	+		PFLU_RS13480	0.26	+1.1
3,051,805	+		PFLU_RS13480	0.26	-0.7
3,051,805	+		PFLU_RS13480	0.26	+1.1
3,051,805	+		PFLU_RS13480	0.26	-1.4
3,051,806	-		PFLU_RS13480	0.26	-0.7
3,051,806	-		PFLU_RS13480	0.26	-1.0
3,051,806	-		PFLU_RS13480	0.26	+0.4
3,051,806	-		PFLU_RS13480	0.26	+1.9
3,051,806	-		PFLU_RS13480	0.26	-0.6
3,051,806	-		PFLU_RS13480	0.26	-0.3
3,051,806	-		PFLU_RS13480	0.26	+1.3
3,051,806	-		PFLU_RS13480	0.26	-0.7
3,051,806	-		PFLU_RS13480	0.26	+0.4
3,051,806	-		PFLU_RS13480	0.26	-0.4
3,051,806	-		PFLU_RS13480	0.26	+0.5
3,051,806	-		PFLU_RS13480	0.26	-0.1
3,051,806	-		PFLU_RS13480	0.26	-0.0
3,051,806	-		PFLU_RS13480	0.26	+0.4
3,051,806	-		PFLU_RS13480	0.26	+0.5
3,051,806	-		PFLU_RS13480	0.26	+0.9
3,051,952	+		PFLU_RS13480	0.30	+1.1
3,051,952	+		PFLU_RS13480	0.30	+0.4
3,051,952	+		PFLU_RS13480	0.30	+0.4
3,051,953	-		PFLU_RS13480	0.30	+1.2
3,051,953	-		PFLU_RS13480	0.30	-1.1
3,051,964	+		PFLU_RS13480	0.31	-0.3
3,051,964	+		PFLU_RS13480	0.31	-1.7
3,051,965	-		PFLU_RS13480	0.31	-0.6
3,051,965	-		PFLU_RS13480	0.31	-0.5
3,051,965	-		PFLU_RS13480	0.31	-0.0
3,051,965	-		PFLU_RS13480	0.31	+0.2
3,051,967	+		PFLU_RS13480	0.31	-0.7
3,051,967	+		PFLU_RS13480	0.31	-0.4
3,052,100	-		PFLU_RS13480	0.35	-1.9
3,052,100	-		PFLU_RS13480	0.35	-1.3
3,052,100	-		PFLU_RS13480	0.35	+0.2
3,052,100	-		PFLU_RS13480	0.35	+2.1
3,052,100	-		PFLU_RS13480	0.35	-1.1
3,052,135	+		PFLU_RS13480	0.36	+1.0
3,052,135	+		PFLU_RS13480	0.36	-0.1
3,052,135	+		PFLU_RS13480	0.36	-2.9
3,052,135	+		PFLU_RS13480	0.36	+0.3
3,052,135	+		PFLU_RS13480	0.36	+0.4
3,052,136	-		PFLU_RS13480	0.36	-0.9
3,052,136	-		PFLU_RS13480	0.36	-0.2
3,052,136	-		PFLU_RS13480	0.36	-0.1
3,052,136	-		PFLU_RS13480	0.36	-2.4
3,052,136	-		PFLU_RS13480	0.36	+0.6
3,052,136	-		PFLU_RS13480	0.36	-0.7
3,052,136	-		PFLU_RS13480	0.36	-0.1
3,052,136	-		PFLU_RS13480	0.36	+0.4
3,052,136	-		PFLU_RS13480	0.36	-0.3
3,052,136	-		PFLU_RS13480	0.36	+0.2
3,052,136	-		PFLU_RS13480	0.36	-2.3
3,052,157	+		PFLU_RS13480	0.36	+0.5
3,052,157	+		PFLU_RS13480	0.36	-0.1
3,052,157	+		PFLU_RS13480	0.36	+0.6
3,052,157	+		PFLU_RS13480	0.36	+0.8
3,052,157	+		PFLU_RS13480	0.36	-2.1
3,052,157	+		PFLU_RS13480	0.36	-0.5
3,052,157	+		PFLU_RS13480	0.36	+0.7
3,052,157	+		PFLU_RS13480	0.36	-0.8
3,052,158	-		PFLU_RS13480	0.36	+0.9
3,052,158	-		PFLU_RS13480	0.36	+1.8
3,052,158	-		PFLU_RS13480	0.36	+0.2
3,052,158	-		PFLU_RS13480	0.36	+0.4
3,052,161	+		PFLU_RS13480	0.37	-0.9
3,052,252	+		PFLU_RS13480	0.39	-0.3
3,052,408	+		PFLU_RS13480	0.44	-1.8
3,052,408	+		PFLU_RS13480	0.44	+0.4
3,052,409	-		PFLU_RS13480	0.44	-1.9
3,052,411	-		PFLU_RS13480	0.44	-0.8
3,052,597	+		PFLU_RS13480	0.50	+0.7
3,052,597	+		PFLU_RS13480	0.50	-2.8
3,052,606	+		PFLU_RS13480	0.50	-0.2
3,052,606	+		PFLU_RS13480	0.50	+0.8
3,052,606	+		PFLU_RS13480	0.50	-0.7
3,052,606	+		PFLU_RS13480	0.50	-0.1
3,052,606	+		PFLU_RS13480	0.50	+0.4
3,052,607	-		PFLU_RS13480	0.50	+2.1
3,052,607	-		PFLU_RS13480	0.50	+1.0
3,052,607	-		PFLU_RS13480	0.50	+0.0
3,052,607	-		PFLU_RS13480	0.50	-0.3
3,052,607	-		PFLU_RS13480	0.50	+0.2
3,052,607	-		PFLU_RS13480	0.50	-0.7
3,052,829	-		PFLU_RS13480	0.56	-0.5
3,052,829	-		PFLU_RS13480	0.56	+0.4
3,052,970	+		PFLU_RS13480	0.61	+1.5
3,052,970	+		PFLU_RS13480	0.61	+0.3
3,052,970	+		PFLU_RS13480	0.61	+0.6
3,052,971	-		PFLU_RS13480	0.61	-0.7
3,053,003	+		PFLU_RS13480	0.62	-0.2
3,053,115	+		PFLU_RS13480	0.65	+0.7
3,053,164	+		PFLU_RS13480	0.66	-0.2
3,053,164	+		PFLU_RS13480	0.66	+0.3
3,053,198	+		PFLU_RS13480	0.68	-0.4
3,053,199	-		PFLU_RS13480	0.68	+0.3
3,053,275	+		PFLU_RS13480	0.70	+0.3
3,053,275	+		PFLU_RS13480	0.70	+1.4
3,053,276	-		PFLU_RS13480	0.70	+0.9
3,053,479	+		PFLU_RS13480	0.76	+0.3
3,053,479	+		PFLU_RS13480	0.76	+0.5
3,053,479	+		PFLU_RS13480	0.76	+1.1
3,053,479	+		PFLU_RS13480	0.76	-0.1
3,053,479	+		PFLU_RS13480	0.76	+0.2
3,053,479	+		PFLU_RS13480	0.76	-0.1
3,053,479	+		PFLU_RS13480	0.76	-0.7
3,053,480	-		PFLU_RS13480	0.76	+1.1
3,053,480	-		PFLU_RS13480	0.76	-0.1
3,053,480	-		PFLU_RS13480	0.76	-0.0
3,053,480	-		PFLU_RS13480	0.76	-0.7
3,053,480	-		PFLU_RS13480	0.76	-0.5
3,053,787	+		PFLU_RS13480	0.85	+1.3
3,053,845	+		PFLU_RS13480	0.87	+1.9
3,053,846	-		PFLU_RS13480	0.87	+0.9
3,053,846	-		PFLU_RS13480	0.87	+1.9
3,053,913	+		PFLU_RS13480	0.89	-2.6
3,053,913	+		PFLU_RS13480	0.89	-0.4
3,053,914	-		PFLU_RS13480	0.89	+0.4
3,053,914	-		PFLU_RS13480	0.89	+1.3
3,053,972	+				+1.4
3,053,972	+				-0.7
3,053,973	-				+0.3
3,053,973	-				+1.5
3,053,973	-				-0.4
3,053,973	-				-0.1
3,053,973	-				+0.3
3,054,068	-				+0.2
3,054,084	+				-0.2
3,054,084	+				+0.8
3,054,160	+				+0.2
3,054,172	+				-0.8
3,054,172	+				-0.7
3,054,249	+				-0.9
3,054,249	+				-0.4
3,054,249	+				-0.9
3,054,249	+				+0.5
3,054,249	+				+0.1
3,054,249	+				-0.0
3,054,249	+				+3.1
3,054,250	-				-0.2
3,054,250	-				-1.4
3,054,250	-				+0.9
3,054,250	-				+0.2
3,054,250	-				+0.2
3,054,250	-				+0.6
3,054,250	-				-0.1
3,054,290	+				+0.1
3,054,296	+				-0.3
3,054,296	+				-0.1
3,054,296	+				+1.3
3,054,296	+				-0.3
3,054,297	-				-0.1
3,054,297	-				+1.6
3,054,297	-				+0.2
3,054,451	+				-2.6
3,054,451	+				-1.8
3,054,451	+				-1.0
3,054,452	-				-0.7
3,054,452	-				-2.1
3,054,556	-		PFLU_RS13485	0.12	+0.2
3,054,607	-		PFLU_RS13485	0.15	+2.0
3,054,645	+		PFLU_RS13485	0.16	+1.5
3,054,645	+		PFLU_RS13485	0.16	+0.1
3,054,645	+		PFLU_RS13485	0.16	-0.5
3,054,645	+		PFLU_RS13485	0.16	+0.0
3,054,645	+		PFLU_RS13485	0.16	-0.9
3,054,646	-		PFLU_RS13485	0.16	-0.3
3,054,646	-		PFLU_RS13485	0.16	-0.1
3,054,646	-		PFLU_RS13485	0.16	+0.3
3,054,785	+		PFLU_RS13485	0.22	+0.9
3,054,877	-		PFLU_RS13485	0.27	+0.4
3,054,877	-		PFLU_RS13485	0.27	-0.5
3,055,062	+		PFLU_RS13485	0.35	-0.6
3,055,063	-		PFLU_RS13485	0.35	-0.6
3,055,063	-		PFLU_RS13485	0.35	-0.2
3,055,063	-		PFLU_RS13485	0.35	-0.2
3,055,125	+		PFLU_RS13485	0.38	+0.8
3,055,125	+		PFLU_RS13485	0.38	-0.3
3,055,126	-		PFLU_RS13485	0.38	+0.5
3,055,126	-		PFLU_RS13485	0.38	+0.9
3,055,126	-		PFLU_RS13485	0.38	+0.4
3,055,161	+		PFLU_RS13485	0.39	-0.1
3,055,161	+		PFLU_RS13485	0.39	+0.5
3,055,161	+		PFLU_RS13485	0.39	+0.0
3,055,162	-		PFLU_RS13485	0.39	-0.7
3,055,162	-		PFLU_RS13485	0.39	-0.2
3,055,162	-		PFLU_RS13485	0.39	+0.5
3,055,162	-		PFLU_RS13485	0.39	+0.8