Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS08505

Experiment: Trisodium citrate (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C); with MOPS
1,895,661	+				-2.5
1,895,890	+				+1.3
1,896,126	+		PFLU_RS31470	0.80	+0.1
1,896,126	+		PFLU_RS31470	0.80	+0.7
1,896,126	+		PFLU_RS31470	0.80	-0.2
1,896,157	+		PFLU_RS31470	0.89	+0.7
1,896,157	+		PFLU_RS31470	0.89	+0.8
1,896,157	+		PFLU_RS31470	0.89	+0.6
1,896,157	+		PFLU_RS31470	0.89	+0.4
1,896,157	+		PFLU_RS31470	0.89	+0.6
1,896,158	-		PFLU_RS31470	0.89	-0.7
1,896,161	+				+1.0
1,896,161	+				-0.1
1,896,161	+				+0.1
1,896,161	+				+0.4
1,896,161	+				-0.4
1,896,161	+				+0.1
1,896,162	-				-0.7
1,896,162	-				+0.2
1,896,162	-				-0.3
1,896,162	-				-1.3
1,896,240	-				+0.4
1,896,240	-				+0.1
1,896,240	-				+0.3
1,896,240	-				+0.3
1,896,322	+				-1.7
1,896,415	+		PFLU_RS08505	0.13	-2.1
1,896,415	+		PFLU_RS08505	0.13	+2.3
1,896,415	+		PFLU_RS08505	0.13	-1.7
1,896,416	-		PFLU_RS08505	0.14	-1.5
1,896,416	-		PFLU_RS08505	0.14	-1.7
1,896,416	-		PFLU_RS08505	0.14	-3.6
1,896,594	+		PFLU_RS08505	0.34	-0.0
1,896,594	+		PFLU_RS08505	0.34	-1.7
1,896,594	+		PFLU_RS08505	0.34	-2.0
1,896,594	+		PFLU_RS08505	0.34	-0.3
1,896,594	+		PFLU_RS08505	0.34	-1.1
1,896,595	-		PFLU_RS08505	0.34	-0.7
1,896,771	+		PFLU_RS08505	0.53	-3.3
1,896,771	+		PFLU_RS08505	0.53	-1.9
1,896,771	+		PFLU_RS08505	0.53	-2.4
1,896,772	-		PFLU_RS08505	0.54	-1.7
1,896,772	-		PFLU_RS08505	0.54	-1.6
1,896,772	-		PFLU_RS08505	0.54	-1.6
1,896,855	+		PFLU_RS08505	0.63	-1.4
1,896,856	-		PFLU_RS08505	0.63	-1.7
1,896,856	-		PFLU_RS08505	0.63	-1.2
1,896,856	-		PFLU_RS08505	0.63	-3.0
1,897,154	-				-1.6
1,897,154	-				-1.6
1,897,189	+				-2.0
1,897,189	+				-2.1
1,897,189	+				-0.7
1,897,189	+				-1.2
1,897,189	+				-1.0
1,897,189	+				-0.8
1,897,190	-				-2.9
1,897,190	-				-0.2
1,897,190	-				+0.1
1,897,190	-				+0.3
1,897,190	-				-3.3
1,897,207	+				-3.4
1,897,207	+				-1.8
1,897,207	+				-2.7
1,897,207	+				-2.7
1,897,207	+				-2.1
1,897,207	+				-1.9
1,897,208	-				-2.6
1,897,208	-				-0.7
1,897,208	-				-1.6
1,897,208	-				-0.1
1,897,208	-				+0.4
1,897,208	-				-1.6
1,897,208	-				-1.9
1,897,208	-				-1.0
1,897,210	+				-1.9
1,897,210	+				-1.7
1,897,210	+				-2.4
1,897,210	+				+0.1
1,897,210	+				-1.4
1,897,210	+				-1.2
1,897,210	+				-1.6
1,897,210	+				-1.0
1,897,210	+				-2.9
1,897,210	+				-2.1
1,897,210	+				-1.7
1,897,210	+				-0.9
1,897,210	+				-1.5
1,897,211	-				-1.0
1,897,211	-				-0.0
1,897,211	-				-0.1
1,897,211	-				-1.4
1,897,211	-				+1.5
1,897,211	-				-0.5
1,897,211	-				-0.3
1,897,211	-				-0.2
1,897,211	-				-1.6
1,897,211	-				-0.6
1,897,211	-				+0.6
1,897,211	-				+0.9
1,897,220	-				-1.5
1,897,229	+				-0.4
1,897,230	-				+0.1
1,897,230	-				+0.8
1,897,230	-				-0.2
1,897,231	+				-1.6
1,897,231	+				-1.7
1,897,231	+				-0.2
1,897,231	+				-0.9
1,897,231	+				-0.4
1,897,231	+				-0.7
1,897,231	+				-0.6
1,897,231	+				-1.7
1,897,231	+				-1.4
1,897,231	+				+0.5
1,897,231	+				-1.2
1,897,231	+				-3.1
1,897,231	+				-1.1
1,897,232	-				+0.6
1,897,232	-				-0.2
1,897,232	-				+0.9
1,897,232	-				+0.6
1,897,232	-				+1.0
1,897,232	-				+0.9
1,897,232	-				+0.1
1,897,232	-				-0.6
1,897,232	-				+0.3
1,897,232	-				-0.6
1,897,232	-				+0.7
1,897,232	-				-0.0
1,897,232	-				+1.0
1,897,232	-				-0.4
1,897,232	-				-1.3
1,897,232	-				-0.9
1,897,232	-				-0.0
1,897,232	-				-0.2
1,897,233	+				+0.1
1,897,233	+				+0.6
1,897,233	+				-1.2
1,897,233	+				-0.3
1,897,233	+				-1.1
1,897,233	+				-3.1
1,897,233	+				-0.8
1,897,233	+				-0.0
1,897,233	+				-0.4
1,897,233	+				-0.4
1,897,233	+				-1.4
1,897,233	+				-1.4
1,897,233	+				-0.2
1,897,233	+				-0.8
1,897,233	+				+0.1
1,897,233	+				-0.1
1,897,233	+				-2.3
1,897,233	+				-0.3
1,897,233	+				-1.7
1,897,233	+				-2.4
1,897,233	+				-2.0
1,897,234	-				-1.3
1,897,234	-				-0.6
1,897,234	-				+0.1
1,897,234	-				+0.6
1,897,234	-				-0.5
1,897,234	-				+0.6
1,897,234	-				+0.2
1,897,234	-				-0.0
1,897,234	-				-0.2
1,897,234	-				-0.8
1,897,234	-				+1.0
1,897,234	-				-2.1
1,897,234	-				-0.3
1,897,234	-				+0.0
1,897,234	-				-0.9
1,897,234	-				+0.1
1,897,234	-				-2.1
1,897,234	-				+0.2
1,897,234	-				+0.9
1,897,234	-				-1.6
1,897,234	-				+0.6
1,897,234	-				-1.8
1,897,234	-				+0.6
1,897,234	-				-0.6
1,897,234	-				+0.2
1,897,234	-				-2.4
1,897,234	-				-0.2
1,897,268	-				+0.3
1,897,268	-				+1.6
1,897,285	-				-0.3
1,897,297	+				-0.2
1,897,298	-				-2.3
1,897,367	+				-0.9
1,897,368	-				+0.9
1,897,368	-				-0.0
1,897,368	-				-0.8
1,897,371	+				+0.2
1,897,371	+				-2.1
1,897,371	+				-1.3
1,897,371	+				-0.1
1,897,372	-				+0.0
1,897,372	-				-1.7
1,897,372	-				+0.1
1,897,373	+				-0.3
1,897,374	-				+0.3
1,897,453	+				+0.1
1,897,489	+				-3.0
1,897,499	-				+1.0
1,897,705	+		PFLU_RS08510	0.18	-1.5
1,897,705	+		PFLU_RS08510	0.18	-0.1
1,897,705	+		PFLU_RS08510	0.18	+0.4
1,897,705	+		PFLU_RS08510	0.18	+0.6
1,897,705	+		PFLU_RS08510	0.18	+0.6
1,897,705	+		PFLU_RS08510	0.18	-0.0
1,897,705	+		PFLU_RS08510	0.18	-0.8
1,897,705	+		PFLU_RS08510	0.18	-1.6
1,897,706	-		PFLU_RS08510	0.18	-0.0
1,897,706	-		PFLU_RS08510	0.18	+1.1
1,897,706	-		PFLU_RS08510	0.18	-1.1
1,897,706	-		PFLU_RS08510	0.18	+1.4
1,897,706	-		PFLU_RS08510	0.18	+0.0
1,897,766	+		PFLU_RS08510	0.23	+1.2
1,897,766	+		PFLU_RS08510	0.23	+0.5
1,897,767	-		PFLU_RS08510	0.23	-1.2
1,897,767	-		PFLU_RS08510	0.23	-0.6
1,897,912	+		PFLU_RS08510	0.35	+0.5
1,897,912	+		PFLU_RS08510	0.35	-0.0
1,897,912	+		PFLU_RS08510	0.35	-0.6
1,897,913	-		PFLU_RS08510	0.35	+0.8
1,897,913	-		PFLU_RS08510	0.35	+0.1
1,897,978	+		PFLU_RS08510	0.40	+0.4
1,897,979	-		PFLU_RS08510	0.41	-0.7
1,898,042	+		PFLU_RS08510	0.46	+0.6
1,898,042	+		PFLU_RS08510	0.46	-0.2
1,898,042	+		PFLU_RS08510	0.46	-2.5
1,898,042	+		PFLU_RS08510	0.46	+0.9
1,898,042	+		PFLU_RS08510	0.46	+0.0
1,898,042	+		PFLU_RS08510	0.46	-0.0
1,898,043	-		PFLU_RS08510	0.46	+0.8
1,898,043	-		PFLU_RS08510	0.46	-1.1
1,898,043	-		PFLU_RS08510	0.46	-0.6
1,898,043	-		PFLU_RS08510	0.46	+1.2
1,898,043	-		PFLU_RS08510	0.46	+0.3
1,898,043	-		PFLU_RS08510	0.46	-0.0
1,898,059	+		PFLU_RS08510	0.47	-1.3
1,898,060	-		PFLU_RS08510	0.47	-0.4
1,898,074	+		PFLU_RS08510	0.48	-1.9
1,898,074	+		PFLU_RS08510	0.48	+0.3
1,898,074	+		PFLU_RS08510	0.48	+1.5
1,898,075	-		PFLU_RS08510	0.48	+0.4
1,898,075	-		PFLU_RS08510	0.48	+2.6
1,898,075	-		PFLU_RS08510	0.48	-0.7
1,898,075	-		PFLU_RS08510	0.48	-1.5
1,898,075	-		PFLU_RS08510	0.48	-0.7
1,898,075	-		PFLU_RS08510	0.48	-1.2
1,898,149	+		PFLU_RS08510	0.55	-0.0
1,898,150	-		PFLU_RS08510	0.55	+0.1
1,898,150	-		PFLU_RS08510	0.55	-0.4
1,898,150	-		PFLU_RS08510	0.55	-0.6
1,898,150	-		PFLU_RS08510	0.55	-2.1