Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_22830 and OH686_22835 are separated by 185 nucleotides OH686_22835 and OH686_22840 are separated by 224 nucleotides OH686_22840 and OH686_22845 are separated by 17 nucleotides OH686_22845 and OH686_22850 are separated by 60 nucleotides OH686_22850 and OH686_22855 are separated by 30 nucleotides
OH686_22830: OH686_22830 - Gamma-glutamyl-putrescine oxidase , at 4,630,892 to 4,632,175
_22830
OH686_22835: OH686_22835 - tRNA-Val, at 4,632,361 to 4,632,437
_22835
OH686_22840: OH686_22840 - threonine--tRNA ligase, at 4,632,662 to 4,634,584
_22840
OH686_22845: OH686_22845 - translation initiation factor IF-3, at 4,634,602 to 4,635,135
_22845
OH686_22850: OH686_22850 - ribosomal protein L35, at 4,635,196 to 4,635,390
_22850
OH686_22855: OH686_22855 - ribosomal protein L20, at 4,635,421 to 4,635,777
_22855
Position (kb)
4632
4633
4634
4635 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.664 kb on + strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.665 kb on - strand, within OH686_22830 at 4631.829 kb on + strand, within OH686_22830 at 4631.829 kb on + strand, within OH686_22830 at 4631.829 kb on + strand, within OH686_22830 at 4631.829 kb on + strand, within OH686_22830 at 4631.829 kb on + strand, within OH686_22830 at 4631.829 kb on + strand, within OH686_22830 at 4631.830 kb on - strand, within OH686_22830 at 4631.830 kb on - strand, within OH686_22830 at 4631.830 kb on - strand, within OH686_22830 at 4631.830 kb on - strand, within OH686_22830 at 4631.830 kb on - strand, within OH686_22830 at 4631.830 kb on - strand, within OH686_22830 at 4631.830 kb on - strand, within OH686_22830 at 4631.840 kb on - strand, within OH686_22830 at 4631.938 kb on + strand, within OH686_22830 at 4631.938 kb on + strand, within OH686_22830 at 4631.938 kb on + strand, within OH686_22830 at 4631.938 kb on + strand, within OH686_22830 at 4631.938 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.940 kb on + strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.941 kb on - strand, within OH686_22830 at 4631.966 kb on - strand, within OH686_22830 at 4632.060 kb on + strand at 4632.060 kb on + strand at 4632.060 kb on + strand at 4632.061 kb on - strand at 4632.144 kb on + strand at 4632.144 kb on + strand at 4632.144 kb on + strand at 4632.144 kb on + strand at 4632.145 kb on - strand at 4632.145 kb on - strand at 4632.145 kb on - strand at 4632.145 kb on - strand at 4632.145 kb on - strand at 4632.147 kb on + strand at 4632.147 kb on + strand at 4632.147 kb on + strand at 4632.147 kb on + strand at 4632.147 kb on + strand at 4632.147 kb on + strand at 4632.148 kb on - strand at 4632.148 kb on - strand at 4632.148 kb on - strand at 4632.148 kb on - strand at 4632.148 kb on - strand at 4632.175 kb on + strand at 4632.176 kb on - strand at 4632.176 kb on - strand at 4632.185 kb on + strand at 4632.186 kb on - strand at 4632.186 kb on - strand at 4632.305 kb on + strand at 4632.454 kb on + strand at 4632.454 kb on + strand at 4632.454 kb on + strand at 4632.454 kb on + strand at 4632.454 kb on + strand at 4632.455 kb on - strand at 4632.455 kb on - strand at 4632.455 kb on - strand at 4632.455 kb on - strand at 4632.455 kb on - strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.458 kb on + strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.459 kb on - strand at 4632.472 kb on + strand at 4632.473 kb on - strand at 4632.473 kb on - strand at 4632.473 kb on - strand at 4632.523 kb on + strand at 4632.523 kb on + strand at 4632.523 kb on + strand at 4632.523 kb on + strand at 4632.523 kb on + strand at 4635.129 kb on + strand at 4635.129 kb on + strand at 4635.129 kb on + strand at 4635.129 kb on + strand at 4635.129 kb on + strand at 4635.402 kb on + strand at 4635.402 kb on + strand at 4635.402 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 4,631,664 + OH686_22830 0.60 +0.4 4,631,664 + OH686_22830 0.60 +1.2 4,631,664 + OH686_22830 0.60 -1.0 4,631,664 + OH686_22830 0.60 -0.5 4,631,664 + OH686_22830 0.60 -0.2 4,631,664 + OH686_22830 0.60 +0.9 4,631,664 + OH686_22830 0.60 +0.6 4,631,664 + OH686_22830 0.60 -0.4 4,631,664 + OH686_22830 0.60 +0.0 4,631,664 + OH686_22830 0.60 +0.7 4,631,664 + OH686_22830 0.60 -0.0 4,631,664 + OH686_22830 0.60 -0.8 4,631,664 + OH686_22830 0.60 -0.9 4,631,665 - OH686_22830 0.60 +0.6 4,631,665 - OH686_22830 0.60 -0.3 4,631,665 - OH686_22830 0.60 -0.1 4,631,665 - OH686_22830 0.60 -0.7 4,631,665 - OH686_22830 0.60 +0.3 4,631,665 - OH686_22830 0.60 -0.6 4,631,665 - OH686_22830 0.60 +0.3 4,631,665 - OH686_22830 0.60 +0.8 4,631,665 - OH686_22830 0.60 -0.3 4,631,665 - OH686_22830 0.60 -0.7 4,631,665 - OH686_22830 0.60 -1.5 4,631,665 - OH686_22830 0.60 -0.2 4,631,665 - OH686_22830 0.60 -0.3 4,631,665 - OH686_22830 0.60 +0.2 4,631,665 - OH686_22830 0.60 +0.2 4,631,665 - OH686_22830 0.60 -0.0 4,631,665 - OH686_22830 0.60 -0.3 4,631,829 + OH686_22830 0.73 +0.1 4,631,829 + OH686_22830 0.73 +0.5 4,631,829 + OH686_22830 0.73 -0.7 4,631,829 + OH686_22830 0.73 +0.6 4,631,829 + OH686_22830 0.73 +0.7 4,631,829 + OH686_22830 0.73 +0.2 4,631,830 - OH686_22830 0.73 -0.4 4,631,830 - OH686_22830 0.73 +0.5 4,631,830 - OH686_22830 0.73 -0.1 4,631,830 - OH686_22830 0.73 +0.8 4,631,830 - OH686_22830 0.73 -1.7 4,631,830 - OH686_22830 0.73 -1.4 4,631,830 - OH686_22830 0.73 -0.0 4,631,840 - OH686_22830 0.74 +0.4 4,631,938 + OH686_22830 0.81 +0.8 4,631,938 + OH686_22830 0.81 -1.5 4,631,938 + OH686_22830 0.81 +0.7 4,631,938 + OH686_22830 0.81 +0.7 4,631,938 + OH686_22830 0.81 +0.8 4,631,940 + OH686_22830 0.82 -0.5 4,631,940 + OH686_22830 0.82 +0.7 4,631,940 + OH686_22830 0.82 -0.1 4,631,940 + OH686_22830 0.82 +0.6 4,631,940 + OH686_22830 0.82 -0.6 4,631,940 + OH686_22830 0.82 +0.5 4,631,940 + OH686_22830 0.82 +0.4 4,631,940 + OH686_22830 0.82 -1.1 4,631,940 + OH686_22830 0.82 -0.2 4,631,940 + OH686_22830 0.82 +0.5 4,631,940 + OH686_22830 0.82 -1.1 4,631,940 + OH686_22830 0.82 -0.1 4,631,940 + OH686_22830 0.82 +0.9 4,631,940 + OH686_22830 0.82 +0.3 4,631,941 - OH686_22830 0.82 -1.2 4,631,941 - OH686_22830 0.82 -1.1 4,631,941 - OH686_22830 0.82 +0.4 4,631,941 - OH686_22830 0.82 +0.2 4,631,941 - OH686_22830 0.82 -0.6 4,631,941 - OH686_22830 0.82 -0.7 4,631,941 - OH686_22830 0.82 -0.2 4,631,941 - OH686_22830 0.82 +0.2 4,631,941 - OH686_22830 0.82 -0.4 4,631,941 - OH686_22830 0.82 -0.7 4,631,941 - OH686_22830 0.82 -0.4 4,631,941 - OH686_22830 0.82 +1.4 4,631,941 - OH686_22830 0.82 +0.2 4,631,941 - OH686_22830 0.82 -0.4 4,631,941 - OH686_22830 0.82 +0.9 4,631,941 - OH686_22830 0.82 -0.2 4,631,966 - OH686_22830 0.84 -0.3 4,632,060 + -0.5 4,632,060 + -1.3 4,632,060 + -0.8 4,632,061 - -0.1 4,632,144 + +0.6 4,632,144 + -1.6 4,632,144 + +0.2 4,632,144 + +0.4 4,632,145 - -0.4 4,632,145 - +2.0 4,632,145 - -0.1 4,632,145 - -0.0 4,632,145 - +0.3 4,632,147 + +0.2 4,632,147 + +0.3 4,632,147 + -0.4 4,632,147 + -1.4 4,632,147 + -0.4 4,632,147 + -0.1 4,632,148 - +0.1 4,632,148 - -1.5 4,632,148 - +0.4 4,632,148 - -0.4 4,632,148 - -0.1 4,632,175 + +0.5 4,632,176 - -0.1 4,632,176 - -1.0 4,632,185 + -0.0 4,632,186 - +0.3 4,632,186 - -0.3 4,632,305 + +0.0 4,632,454 + -0.1 4,632,454 + -0.2 4,632,454 + +0.1 4,632,454 + +0.1 4,632,454 + +1.6 4,632,455 - +0.1 4,632,455 - -1.3 4,632,455 - -0.7 4,632,455 - -0.1 4,632,455 - -0.0 4,632,458 + -0.6 4,632,458 + -0.5 4,632,458 + -1.8 4,632,458 + -1.6 4,632,458 + -0.8 4,632,458 + +0.9 4,632,458 + -0.6 4,632,458 + -0.1 4,632,458 + -0.3 4,632,458 + -0.9 4,632,458 + +2.0 4,632,458 + -0.5 4,632,458 + -0.8 4,632,458 + +0.1 4,632,458 + -0.4 4,632,458 + -0.3 4,632,458 + -0.4 4,632,458 + -0.0 4,632,458 + -1.1 4,632,458 + +1.3 4,632,458 + -0.3 4,632,459 - -1.4 4,632,459 - -1.0 4,632,459 - +0.2 4,632,459 - +0.2 4,632,459 - +0.7 4,632,459 - +0.1 4,632,459 - -0.7 4,632,459 - +0.1 4,632,459 - -0.1 4,632,459 - +0.3 4,632,459 - +0.0 4,632,459 - +0.5 4,632,459 - +1.0 4,632,472 + +0.2 4,632,473 - +0.4 4,632,473 - -0.9 4,632,473 - -0.7 4,632,523 + -0.2 4,632,523 + -0.7 4,632,523 + +0.6 4,632,523 + -0.4 4,632,523 + +0.0 4,635,129 + -0.0 4,635,129 + -0.6 4,635,129 + +0.3 4,635,129 + +2.2 4,635,129 + +0.4 4,635,402 + -0.1 4,635,402 + -2.4 4,635,402 + +1.0
Or see this region's nucleotide sequence