Strain Fitness in Pseudomonas sp. S08-1 around OH686_20000

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
4,091,047	+				-1.1
4,091,047	+				-0.8
4,091,047	+				-2.5
4,091,047	+				-3.8
4,091,047	+				-2.3
4,091,047	+				-4.0
4,091,047	+				-2.2
4,091,047	+				-3.9
4,091,047	+				-1.8
4,091,048	-				-0.0
4,091,048	-				-1.2
4,091,048	-				-4.5
4,091,048	-				-3.2
4,091,048	-				-4.5
4,091,048	-				-4.1
4,091,048	-				-3.0
4,091,071	+				-2.2
4,091,071	+				-2.6
4,091,071	+				-2.1
4,091,071	+				-3.7
4,091,072	-				-0.6
4,091,072	-				-2.6
4,091,072	-				-3.7
4,091,072	-				-4.3
4,091,072	-				-2.0
4,091,215	+		OH686_19995	0.21	-1.5
4,091,215	+		OH686_19995	0.21	-2.5
4,091,215	+		OH686_19995	0.21	-1.6
4,091,215	+		OH686_19995	0.21	-0.8
4,091,215	+		OH686_19995	0.21	-2.8
4,091,215	+		OH686_19995	0.21	-1.7
4,091,215	+		OH686_19995	0.21	-3.0
4,091,215	+		OH686_19995	0.21	-1.2
4,091,215	+		OH686_19995	0.21	-3.3
4,091,215	+		OH686_19995	0.21	-3.5
4,091,215	+		OH686_19995	0.21	-1.0
4,091,215	+		OH686_19995	0.21	-3.5
4,091,216	-		OH686_19995	0.21	-2.3
4,091,216	-		OH686_19995	0.21	-2.4
4,091,216	-		OH686_19995	0.21	-2.1
4,091,216	-		OH686_19995	0.21	-2.9
4,091,216	-		OH686_19995	0.21	-2.8
4,091,216	-		OH686_19995	0.21	-2.3
4,091,216	-		OH686_19995	0.21	-3.2
4,091,216	-		OH686_19995	0.21	-1.9
4,091,216	-		OH686_19995	0.21	-0.7
4,091,216	-		OH686_19995	0.21	-2.3
4,091,216	-		OH686_19995	0.21	-0.0
4,091,216	-		OH686_19995	0.21	-4.1
4,091,248	+		OH686_19995	0.24	-1.7
4,091,249	-		OH686_19995	0.25	-2.9
4,091,437	+		OH686_19995	0.44	-0.0
4,091,437	+		OH686_19995	0.44	-2.6
4,091,438	-		OH686_19995	0.44	-0.8
4,091,438	-		OH686_19995	0.44	-3.0
4,091,438	-		OH686_19995	0.44	-3.4
4,091,438	-		OH686_19995	0.44	-1.3
4,091,584	+		OH686_19995	0.59	-0.8
4,091,584	+		OH686_19995	0.59	-1.6
4,091,585	-		OH686_19995	0.59	-2.8
4,091,585	-		OH686_19995	0.59	-4.3
4,091,585	-		OH686_19995	0.59	-2.1
4,091,617	+		OH686_19995	0.62	-3.8
4,091,617	+		OH686_19995	0.62	-2.4
4,091,618	-		OH686_19995	0.62	-2.7
4,091,618	-		OH686_19995	0.62	-2.0
4,091,618	-		OH686_19995	0.62	-3.3
4,091,761	+		OH686_19995	0.77	-2.1
4,091,761	+		OH686_19995	0.77	-2.2
4,091,761	+		OH686_19995	0.77	-0.3
4,091,762	-		OH686_19995	0.77	-3.1
4,091,762	-		OH686_19995	0.77	-2.8
4,091,762	-		OH686_19995	0.77	-2.7
4,091,762	-		OH686_19995	0.77	-4.2
4,091,791	+		OH686_19995	0.80	-1.9
4,091,791	+		OH686_19995	0.80	-0.6
4,091,791	+		OH686_19995	0.80	-0.8
4,091,791	+		OH686_19995	0.80	-1.3
4,091,791	+		OH686_19995	0.80	-1.7
4,091,791	+		OH686_19995	0.80	-2.9
4,091,791	+		OH686_19995	0.80	-2.6
4,091,791	+		OH686_19995	0.80	-0.8
4,091,791	+		OH686_19995	0.80	-2.2
4,091,792	-		OH686_19995	0.80	-3.5
4,091,792	-		OH686_19995	0.80	-1.2
4,091,792	-		OH686_19995	0.80	-2.2
4,091,792	-		OH686_19995	0.80	-3.6
4,091,792	-		OH686_19995	0.80	-3.2
4,091,792	-		OH686_19995	0.80	-4.3
4,091,792	-		OH686_19995	0.80	-3.1
4,091,792	-		OH686_19995	0.80	-3.5
4,091,792	-		OH686_19995	0.80	-2.1
4,092,005	+				-3.3
4,092,005	+				-3.8
4,092,005	+				-2.8
4,092,005	+				-2.8
4,092,005	+				-3.2
4,092,005	+				-1.7
4,092,005	+				-3.1
4,092,006	-				+0.1
4,092,006	-				-0.3
4,092,006	-				+0.2
4,092,006	-				-1.0
4,092,006	-				-1.0
4,092,006	-				-2.6
4,092,006	-				-1.7
4,092,108	+				-0.8
4,092,108	+				+0.1
4,092,108	+				-2.0
4,092,108	+				-2.9
4,092,108	+				-1.4
4,092,109	-				+1.3
4,092,109	-				+1.4
4,092,109	-				+0.4
4,092,109	-				+0.6
4,092,109	-				-1.6
4,092,109	-				+2.0
4,092,109	-				+1.0
4,092,109	-				+0.8
4,092,109	-				-0.0
4,092,109	-				+0.4
4,092,109	-				-0.5
4,092,141	+		OH686_20000	0.10	-2.7
4,092,141	+		OH686_20000	0.10	-0.8
4,092,141	+		OH686_20000	0.10	-3.1
4,092,141	+		OH686_20000	0.10	-3.1
4,092,141	+		OH686_20000	0.10	-1.1
4,092,141	+		OH686_20000	0.10	-1.3
4,092,141	+		OH686_20000	0.10	-2.0
4,092,141	+		OH686_20000	0.10	-3.2
4,092,141	+		OH686_20000	0.10	-1.8
4,092,141	+		OH686_20000	0.10	-2.4
4,092,141	+		OH686_20000	0.10	-1.4
4,092,141	+		OH686_20000	0.10	-1.8
4,092,142	-		OH686_20000	0.10	+1.0
4,092,142	-		OH686_20000	0.10	+0.2
4,092,142	-		OH686_20000	0.10	-0.0
4,092,142	-		OH686_20000	0.10	+0.7
4,092,142	-		OH686_20000	0.10	+1.2
4,092,142	-		OH686_20000	0.10	+0.4
4,092,219	+		OH686_20000	0.16	-3.6
4,092,219	+		OH686_20000	0.16	-1.3
4,092,219	+		OH686_20000	0.16	-1.5
4,092,219	+		OH686_20000	0.16	-1.4
4,092,219	+		OH686_20000	0.16	-0.8
4,092,219	+		OH686_20000	0.16	-0.0
4,092,220	-		OH686_20000	0.16	+0.4
4,092,268	-		OH686_20000	0.20	-0.1
4,092,274	-		OH686_20000	0.20	+0.9
4,092,360	+		OH686_20000	0.27	-1.8
4,092,361	-		OH686_20000	0.27	+1.5
4,092,361	-		OH686_20000	0.27	+0.9
4,092,361	-		OH686_20000	0.27	-0.2
4,092,361	-		OH686_20000	0.27	-0.4
4,092,361	-		OH686_20000	0.27	+1.2
4,092,361	-		OH686_20000	0.27	-0.3
4,092,426	+		OH686_20000	0.32	-1.6
4,092,427	-		OH686_20000	0.33	+0.0
4,092,427	-		OH686_20000	0.33	-0.3
4,092,427	-		OH686_20000	0.33	+0.6
4,092,573	+		OH686_20000	0.44	-2.2
4,092,573	+		OH686_20000	0.44	-2.8
4,092,573	+		OH686_20000	0.44	-2.2
4,092,574	-		OH686_20000	0.44	-1.6
4,092,574	-		OH686_20000	0.44	-1.6
4,092,594	+		OH686_20000	0.46	-1.5
4,092,594	+		OH686_20000	0.46	-1.2
4,092,594	+		OH686_20000	0.46	-2.9
4,092,594	+		OH686_20000	0.46	-0.3
4,092,594	+		OH686_20000	0.46	-1.0
4,092,594	+		OH686_20000	0.46	-1.6
4,092,594	+		OH686_20000	0.46	-1.4
4,092,594	+		OH686_20000	0.46	-3.4
4,092,595	-		OH686_20000	0.46	-2.5
4,092,595	-		OH686_20000	0.46	-1.3
4,092,595	-		OH686_20000	0.46	-0.2
4,092,595	-		OH686_20000	0.46	+0.5
4,092,595	-		OH686_20000	0.46	-2.3
4,092,595	-		OH686_20000	0.46	-1.5
4,092,597	+		OH686_20000	0.46	-2.6
4,092,597	+		OH686_20000	0.46	-2.4
4,092,597	+		OH686_20000	0.46	-0.0
4,092,597	+		OH686_20000	0.46	-3.2
4,092,597	+		OH686_20000	0.46	-2.3
4,092,597	+		OH686_20000	0.46	-2.4
4,092,597	+		OH686_20000	0.46	-0.9
4,092,598	-		OH686_20000	0.46	-3.6
4,092,598	-		OH686_20000	0.46	+0.1
4,092,598	-		OH686_20000	0.46	-0.9
4,092,598	-		OH686_20000	0.46	-1.2
4,092,598	-		OH686_20000	0.46	+0.3
4,092,598	-		OH686_20000	0.46	-0.0
4,092,598	-		OH686_20000	0.46	-1.3
4,092,598	-		OH686_20000	0.46	-1.3
4,092,598	-		OH686_20000	0.46	-2.1
4,092,598	-		OH686_20000	0.46	-3.0
4,092,598	-		OH686_20000	0.46	-0.8
4,092,598	-		OH686_20000	0.46	-1.3
4,092,598	-		OH686_20000	0.46	-1.4
4,092,598	-		OH686_20000	0.46	-2.2
4,092,600	+		OH686_20000	0.46	-2.2
4,092,601	-		OH686_20000	0.46	-0.3
4,092,862	+		OH686_20000	0.67	-2.3
4,092,862	+		OH686_20000	0.67	-0.3
4,092,862	+		OH686_20000	0.67	-2.8
4,092,957	-		OH686_20000	0.74	-0.6
4,093,143	+		OH686_20000	0.89	-2.2
4,093,143	+		OH686_20000	0.89	-2.1
4,093,143	+		OH686_20000	0.89	-3.2
4,093,143	+		OH686_20000	0.89	-3.3
4,093,144	-		OH686_20000	0.89	-1.0
4,093,144	-		OH686_20000	0.89	-4.5
4,093,144	-		OH686_20000	0.89	+0.4
4,093,144	-		OH686_20000	0.89	-4.8
4,093,144	-		OH686_20000	0.89	-2.2
4,093,144	-		OH686_20000	0.89	-2.0
4,093,144	-		OH686_20000	0.89	-1.7
4,093,449	-				+0.4
4,093,461	+				+1.2
4,093,461	+				+1.1
4,093,461	+				+1.1
4,093,462	-				-0.8
4,093,465	+				-0.1
4,093,466	-				-1.0
4,093,466	-				-3.8
4,093,466	-				-3.6
4,093,466	-				-2.2
4,093,466	-				-2.5
4,093,622	+		OH686_20005	0.21	-0.6
4,093,622	+		OH686_20005	0.21	-3.4
4,093,622	+		OH686_20005	0.21	-2.3
4,093,623	-		OH686_20005	0.22	-4.2
4,093,623	-		OH686_20005	0.22	-4.1
4,093,781	+		OH686_20005	0.45	-1.1
4,093,782	-		OH686_20005	0.45	-3.3
4,093,889	+		OH686_20005	0.60	-3.1
4,093,889	+		OH686_20005	0.60	-2.4
4,093,889	+		OH686_20005	0.60	-3.5
4,093,889	+		OH686_20005	0.60	-1.9
4,093,890	-		OH686_20005	0.60	-4.2
4,093,890	-		OH686_20005	0.60	-3.5
4,093,890	-		OH686_20005	0.60	-2.8
4,093,890	-		OH686_20005	0.60	-3.5
4,094,066	+		OH686_20005	0.86	-3.0
4,094,066	+		OH686_20005	0.86	-3.8
4,094,066	+		OH686_20005	0.86	-1.6
4,094,066	+		OH686_20005	0.86	-2.1
4,094,066	+		OH686_20005	0.86	-2.4
4,094,066	+		OH686_20005	0.86	-1.6
4,094,066	+		OH686_20005	0.86	-1.3
4,094,066	+		OH686_20005	0.86	-2.3
4,094,067	-		OH686_20005	0.86	-1.4
4,094,067	-		OH686_20005	0.86	-3.2
4,094,067	-		OH686_20005	0.86	-3.8
4,094,067	-		OH686_20005	0.86	-5.4
4,094,067	-		OH686_20005	0.86	-3.2
4,094,067	-		OH686_20005	0.86	-2.1
4,094,067	-		OH686_20005	0.86	-3.5