Strain Fitness in Pseudomonas sp. S08-1 around OH686_14420

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
3,011,777	+		OH686_14410	0.81	-2.3
3,011,835	+		OH686_14410	0.84	-0.1
3,011,835	+		OH686_14410	0.84	+0.9
3,011,835	+		OH686_14410	0.84	-0.9
3,011,835	+		OH686_14410	0.84	-1.8
3,011,870	+		OH686_14410	0.86	-1.6
3,011,870	+		OH686_14410	0.86	-1.6
3,011,870	+		OH686_14410	0.86	-0.1
3,011,870	+		OH686_14410	0.86	-2.2
3,011,944	+		OH686_14410	0.90	-0.4
3,011,944	+		OH686_14410	0.90	-0.4
3,011,944	+		OH686_14410	0.90	-0.6
3,011,944	+		OH686_14410	0.90	-0.1
3,011,944	+		OH686_14410	0.90	-0.2
3,011,944	+		OH686_14410	0.90	-0.7
3,011,944	+		OH686_14410	0.90	+0.9
3,011,944	+		OH686_14410	0.90	-1.9
3,011,944	+		OH686_14410	0.90	+0.7
3,011,944	+		OH686_14410	0.90	-0.7
3,011,944	+		OH686_14410	0.90	-1.9
3,011,944	+		OH686_14410	0.90	-1.5
3,011,945	-		OH686_14410	0.90	-0.4
3,011,969	+				-3.9
3,011,969	+				-0.6
3,011,969	+				+0.9
3,011,969	+				-1.1
3,011,969	+				-1.4
3,011,969	+				-1.0
3,011,969	+				-0.1
3,011,969	+				-1.3
3,011,969	+				+0.9
3,012,016	+				-0.4
3,012,016	+				-0.0
3,012,098	-				-0.2
3,012,107	+				+0.2
3,012,108	-				-0.6
3,012,109	+				-0.0
3,012,109	+				+0.3
3,012,109	+				+0.2
3,012,109	+				+0.3
3,012,110	-				-1.1
3,012,110	-				-0.1
3,012,110	-				-0.5
3,012,110	-				-0.3
3,012,110	-				-0.9
3,012,110	-				-1.8
3,012,110	-				-1.6
3,012,110	-				-0.6
3,012,110	-				-0.3
3,012,110	-				-0.9
3,012,129	-				-1.4
3,012,129	-				-1.6
3,012,135	-				+0.0
3,012,135	-				+0.9
3,012,161	+				+0.3
3,012,162	-				-1.3
3,012,162	-				-1.1
3,012,195	+				-0.3
3,012,195	+				-1.1
3,012,196	-				-1.3
3,012,196	-				-0.8
3,012,315	+		OH686_14415	0.27	+0.9
3,012,316	-		OH686_14415	0.27	-0.1
3,012,340	+		OH686_14415	0.31	-1.3
3,012,340	+		OH686_14415	0.31	-0.3
3,012,340	+		OH686_14415	0.31	+0.2
3,012,340	+		OH686_14415	0.31	+0.7
3,012,340	+		OH686_14415	0.31	-0.6
3,012,341	-		OH686_14415	0.31	-0.7
3,012,384	+		OH686_14415	0.38	-0.6
3,012,384	+		OH686_14415	0.38	-0.4
3,012,384	+		OH686_14415	0.38	-0.2
3,012,384	+		OH686_14415	0.38	-0.4
3,012,384	+		OH686_14415	0.38	-1.1
3,012,385	-		OH686_14415	0.38	-2.2
3,012,388	+		OH686_14415	0.38	+0.7
3,012,388	+		OH686_14415	0.38	-1.0
3,012,388	+		OH686_14415	0.38	+0.3
3,012,388	+		OH686_14415	0.38	-0.9
3,012,388	+		OH686_14415	0.38	-1.0
3,012,388	+		OH686_14415	0.38	-2.2
3,012,388	+		OH686_14415	0.38	-0.4
3,012,388	+		OH686_14415	0.38	-1.1
3,012,388	+		OH686_14415	0.38	-2.2
3,012,388	+		OH686_14415	0.38	-1.6
3,012,388	+		OH686_14415	0.38	-1.9
3,012,388	+		OH686_14415	0.38	-0.3
3,012,388	+		OH686_14415	0.38	-2.0
3,012,388	+		OH686_14415	0.38	-1.5
3,012,389	-		OH686_14415	0.38	-0.4
3,012,389	-		OH686_14415	0.38	-0.9
3,012,389	-		OH686_14415	0.38	-0.1
3,012,389	-		OH686_14415	0.38	-0.7
3,012,389	-		OH686_14415	0.38	-1.1
3,012,389	-		OH686_14415	0.38	-0.4
3,012,389	-		OH686_14415	0.38	-1.7
3,012,389	-		OH686_14415	0.38	-2.1
3,012,389	-		OH686_14415	0.38	-2.0
3,012,389	-		OH686_14415	0.38	-1.4
3,012,389	-		OH686_14415	0.38	-0.7
3,012,389	-		OH686_14415	0.38	-0.9
3,012,389	-		OH686_14415	0.38	-0.4
3,012,389	-		OH686_14415	0.38	-0.1
3,012,451	+		OH686_14415	0.48	-0.1
3,012,451	+		OH686_14415	0.48	-1.6
3,012,451	+		OH686_14415	0.48	+0.0
3,012,477	+		OH686_14415	0.52	-0.6
3,012,477	+		OH686_14415	0.52	-0.1
3,012,477	+		OH686_14415	0.52	-0.9
3,012,477	+		OH686_14415	0.52	-1.1
3,012,478	-		OH686_14415	0.52	-0.1
3,012,478	-		OH686_14415	0.52	-1.9
3,012,480	+		OH686_14415	0.53	+0.7
3,012,481	-		OH686_14415	0.53	-2.4
3,012,481	-		OH686_14415	0.53	-0.4
3,012,481	-		OH686_14415	0.53	-0.2
3,012,543	+		OH686_14415	0.63	-0.4
3,012,544	-		OH686_14415	0.63	-1.1
3,012,563	+		OH686_14415	0.66	-3.1
3,012,563	+		OH686_14415	0.66	+1.3
3,012,563	+		OH686_14415	0.66	-2.4
3,012,564	-		OH686_14415	0.66	+0.1
3,012,564	-		OH686_14415	0.66	+0.3
3,012,612	+		OH686_14415	0.74	-1.1
3,012,612	+		OH686_14415	0.74	-1.3
3,012,612	+		OH686_14415	0.74	+1.0
3,012,612	+		OH686_14415	0.74	-0.4
3,012,612	+		OH686_14415	0.74	+0.9
3,012,612	+		OH686_14415	0.74	-0.4
3,012,613	-		OH686_14415	0.74	-1.8
3,012,613	-		OH686_14415	0.74	-0.9
3,012,613	-		OH686_14415	0.74	-1.3
3,012,613	-		OH686_14415	0.74	-1.9
3,012,613	-		OH686_14415	0.74	-2.7
3,012,668	+		OH686_14415	0.82	-0.7
3,012,696	+		OH686_14415	0.87	-0.1
3,012,696	+		OH686_14415	0.87	+1.1
3,012,696	+		OH686_14415	0.87	-0.4
3,012,696	+		OH686_14415	0.87	-0.4
3,012,696	+		OH686_14415	0.87	-1.9
3,012,699	+		OH686_14415	0.87	-0.1
3,012,699	+		OH686_14415	0.87	-1.1
3,012,699	+		OH686_14415	0.87	-0.4
3,012,699	+		OH686_14415	0.87	-1.6
3,012,699	+		OH686_14415	0.87	+0.9
3,012,699	+		OH686_14415	0.87	-1.6
3,012,699	+		OH686_14415	0.87	-0.9
3,012,699	+		OH686_14415	0.87	+0.9
3,012,699	+		OH686_14415	0.87	-0.1
3,012,699	+		OH686_14415	0.87	+0.4
3,012,699	+		OH686_14415	0.87	-1.8
3,012,699	+		OH686_14415	0.87	-0.8
3,012,699	+		OH686_14415	0.87	-0.4
3,012,700	-		OH686_14415	0.88	-0.1
3,012,700	-		OH686_14415	0.88	-0.1
3,012,700	-		OH686_14415	0.88	-0.7
3,012,700	-		OH686_14415	0.88	-1.1
3,012,700	-		OH686_14415	0.88	-0.7
3,012,700	-		OH686_14415	0.88	-0.1
3,012,700	-		OH686_14415	0.88	-0.7
3,012,700	-		OH686_14415	0.88	+0.3
3,012,700	-		OH686_14415	0.88	-0.9
3,012,700	-		OH686_14415	0.88	-2.0
3,012,700	-		OH686_14415	0.88	-0.1
3,012,704	-		OH686_14415	0.88	-1.4
3,012,704	-		OH686_14415	0.88	-1.1
3,012,724	+				-0.1
3,012,724	+				+0.6
3,012,724	+				-0.7
3,012,724	+				+0.8
3,012,724	+				-0.4
3,012,725	-				-0.4
3,012,725	-				-0.9
3,012,725	-				-1.6
3,012,725	-				+1.5
3,012,725	-				-0.1
3,012,725	-				-1.3
3,012,729	+				-1.6
3,012,729	+				-2.2
3,012,729	+				-1.0
3,012,730	-				-1.1
3,012,730	-				+0.3
3,012,730	-				-0.9
3,012,730	-				-0.7
3,012,797	+				+0.2
3,012,798	-				-0.9
3,012,834	-				-0.7
3,012,912	-				-0.7
3,012,912	-				-0.9
3,012,912	-				-0.9
3,012,926	+				-0.1
3,012,926	+				-0.7
3,012,927	-				-1.3
3,012,927	-				-0.4
3,012,927	-				-0.1
3,012,961	+		OH686_14420	0.10	-1.6
3,012,961	+		OH686_14420	0.10	-0.4
3,012,962	-		OH686_14420	0.10	-0.4
3,012,962	-		OH686_14420	0.10	-0.4
3,012,962	-		OH686_14420	0.10	-2.3
3,012,985	-		OH686_14420	0.12	-0.4
3,012,987	-		OH686_14420	0.12	-0.1
3,012,987	-		OH686_14420	0.12	-0.7
3,012,987	-		OH686_14420	0.12	-1.3
3,013,037	-		OH686_14420	0.15	-0.1
3,013,037	-		OH686_14420	0.15	+0.9
3,013,037	-		OH686_14420	0.15	-1.3
3,013,037	-		OH686_14420	0.15	-0.4
3,013,037	-		OH686_14420	0.15	-0.1
3,013,163	-		OH686_14420	0.21	-0.1
3,013,195	-		OH686_14420	0.23	-0.4
3,013,195	-		OH686_14420	0.23	-1.3
3,013,196	+		OH686_14420	0.23	-0.7
3,013,196	+		OH686_14420	0.23	-0.9
3,013,197	-		OH686_14420	0.23	-0.3
3,013,197	-		OH686_14420	0.23	-0.1
3,013,197	-		OH686_14420	0.23	-0.7
3,013,197	-		OH686_14420	0.23	-1.1
3,013,197	-		OH686_14420	0.23	-1.3
3,013,197	-		OH686_14420	0.23	-0.1
3,013,425	+		OH686_14420	0.36	-0.7
3,013,426	-		OH686_14420	0.36	-0.4
3,013,517	+		OH686_14420	0.41	-0.1
3,013,518	-		OH686_14420	0.41	-0.1
3,013,519	+		OH686_14420	0.41	-0.7
3,013,519	+		OH686_14420	0.41	-0.4
3,013,520	-		OH686_14420	0.41	-0.4
3,013,520	-		OH686_14420	0.41	-0.7
3,013,563	+		OH686_14420	0.44	-1.0
3,013,563	+		OH686_14420	0.44	-0.2
3,013,563	+		OH686_14420	0.44	-0.3
3,013,564	-		OH686_14420	0.44	-0.1
3,013,564	-		OH686_14420	0.44	-0.4
3,013,757	+		OH686_14420	0.54	-0.1
3,013,757	+		OH686_14420	0.54	-0.4
3,013,758	-		OH686_14420	0.54	-1.4
3,013,758	-		OH686_14420	0.54	-0.7
3,013,758	-		OH686_14420	0.54	-1.6
3,013,758	-		OH686_14420	0.54	-0.4
3,013,758	-		OH686_14420	0.54	-0.4
3,013,758	-		OH686_14420	0.54	-0.7
3,013,758	-		OH686_14420	0.54	-0.7
3,013,758	-		OH686_14420	0.54	-1.4
3,013,886	+		OH686_14420	0.62	-0.1
3,013,886	+		OH686_14420	0.62	-0.1
3,013,887	-		OH686_14420	0.62	-0.4
3,013,887	-		OH686_14420	0.62	-1.9
3,013,890	+		OH686_14420	0.62	-0.1
3,013,891	-		OH686_14420	0.62	-0.7
3,013,891	-		OH686_14420	0.62	-0.4
3,013,891	-		OH686_14420	0.62	-1.4
3,013,891	-		OH686_14420	0.62	-0.4
3,013,891	-		OH686_14420	0.62	-0.4
3,013,993	+		OH686_14420	0.67	-1.4
3,013,993	+		OH686_14420	0.67	-0.1
3,013,994	-		OH686_14420	0.67	-0.4
3,014,102	+		OH686_14420	0.73	-0.1
3,014,103	-		OH686_14420	0.74	-0.1
3,014,151	-		OH686_14420	0.76	-0.1
3,014,184	-		OH686_14420	0.78	-2.0
3,014,230	-		OH686_14420	0.81	-0.1
3,014,230	-		OH686_14420	0.81	-0.1
3,014,302	+		OH686_14420	0.85	-0.1
3,014,302	+		OH686_14420	0.85	-0.1
3,014,302	+		OH686_14420	0.85	-0.7
3,014,302	+		OH686_14420	0.85	-0.1
3,014,302	+		OH686_14420	0.85	-0.4
3,014,302	+		OH686_14420	0.85	-0.1
3,014,302	+		OH686_14420	0.85	-0.7
3,014,302	+		OH686_14420	0.85	-0.1
3,014,302	+		OH686_14420	0.85	-0.1
3,014,303	-		OH686_14420	0.85	-1.3
3,014,303	-		OH686_14420	0.85	-0.1
3,014,303	-		OH686_14420	0.85	-0.1
3,014,303	-		OH686_14420	0.85	-0.1
3,014,303	-		OH686_14420	0.85	-1.1
3,014,303	-		OH686_14420	0.85	-0.7
3,014,303	-		OH686_14420	0.85	-0.4
3,014,303	-		OH686_14420	0.85	-0.7
3,014,303	-		OH686_14420	0.85	-0.1
3,014,303	-		OH686_14420	0.85	-1.1
3,014,303	-		OH686_14420	0.85	+0.1
3,014,306	+		OH686_14420	0.85	+0.9
3,014,306	+		OH686_14420	0.85	-0.1
3,014,306	+		OH686_14420	0.85	+0.3
3,014,307	-		OH686_14420	0.85	-0.1
3,014,307	-		OH686_14420	0.85	-1.3
3,014,323	-		OH686_14420	0.86	-0.1
3,014,351	+		OH686_14420	0.87	-0.1
3,014,351	+		OH686_14420	0.87	+1.2
3,014,351	+		OH686_14420	0.87	-0.8
3,014,352	-		OH686_14420	0.87	-2.8
3,014,518	+				-0.1
3,014,518	+				-1.6
3,014,518	+				-2.0
3,014,519	-				-0.6
3,014,519	-				-0.7
3,014,592	+				+0.2
3,014,592	+				-1.6
3,014,592	+				-2.0
3,014,593	-				+0.1
3,014,597	-				+0.2
3,014,597	-				-0.8
3,014,597	-				-0.2
3,014,641	+				-0.7
3,014,641	+				-1.4
3,014,642	-				+0.1
3,014,802	-		OH686_14425	0.12	-1.7
3,014,831	+		OH686_14425	0.15	+0.1
3,014,831	+		OH686_14425	0.15	-2.0
3,015,023	+		OH686_14425	0.30	-2.8
3,015,023	+		OH686_14425	0.30	-2.2
3,015,023	+		OH686_14425	0.30	-0.7
3,015,023	+		OH686_14425	0.30	-1.5
3,015,023	+		OH686_14425	0.30	-2.4
3,015,023	+		OH686_14425	0.30	-0.1
3,015,023	+		OH686_14425	0.30	-1.5
3,015,024	-		OH686_14425	0.30	-1.0
3,015,024	-		OH686_14425	0.30	-3.3
3,015,024	-		OH686_14425	0.30	-0.6
3,015,024	-		OH686_14425	0.30	-2.6
3,015,024	-		OH686_14425	0.30	-1.2
3,015,024	-		OH686_14425	0.30	+0.5
3,015,024	-		OH686_14425	0.30	-3.2
3,015,032	+		OH686_14425	0.31	-0.1
3,015,033	-		OH686_14425	0.31	-2.3
3,015,033	-		OH686_14425	0.31	-2.2
3,015,075	+		OH686_14425	0.34	-3.3
3,015,075	+		OH686_14425	0.34	-1.3
3,015,075	+		OH686_14425	0.34	-1.5
3,015,076	-		OH686_14425	0.34	-2.1
3,015,076	-		OH686_14425	0.34	-0.3
3,015,076	-		OH686_14425	0.34	-2.1
3,015,076	-		OH686_14425	0.34	-2.8
3,015,095	+		OH686_14425	0.36	-0.6
3,015,096	-		OH686_14425	0.36	-1.9
3,015,111	+		OH686_14425	0.37	-2.4
3,015,111	+		OH686_14425	0.37	-0.7
3,015,111	+		OH686_14425	0.37	-1.8
3,015,111	+		OH686_14425	0.37	-0.7
3,015,111	+		OH686_14425	0.37	-0.4
3,015,111	+		OH686_14425	0.37	-0.7
3,015,111	+		OH686_14425	0.37	-1.0
3,015,111	+		OH686_14425	0.37	-2.5
3,015,111	+		OH686_14425	0.37	-3.2
3,015,112	-		OH686_14425	0.37	-0.6
3,015,112	-		OH686_14425	0.37	-3.3
3,015,112	-		OH686_14425	0.37	-3.4
3,015,113	+		OH686_14425	0.37	-0.9
3,015,113	+		OH686_14425	0.37	-2.0
3,015,113	+		OH686_14425	0.37	-0.6
3,015,114	-		OH686_14425	0.37	-1.6
3,015,114	-		OH686_14425	0.37	-1.4
3,015,139	+		OH686_14425	0.39	-1.8
3,015,139	+		OH686_14425	0.39	-2.0
3,015,139	+		OH686_14425	0.39	-0.4
3,015,139	+		OH686_14425	0.39	+0.5
3,015,140	-		OH686_14425	0.40	-0.1
3,015,140	-		OH686_14425	0.40	-1.7
3,015,140	-		OH686_14425	0.40	-3.0
3,015,219	+		OH686_14425	0.46	-1.3
3,015,220	-		OH686_14425	0.46	-0.7
3,015,333	+		OH686_14425	0.55	-0.9
3,015,333	+		OH686_14425	0.55	-0.4
3,015,334	-		OH686_14425	0.55	-1.9
3,015,334	-		OH686_14425	0.55	-1.1
3,015,405	+		OH686_14425	0.61	-2.2
3,015,405	+		OH686_14425	0.61	-1.6
3,015,405	+		OH686_14425	0.61	-0.7
3,015,405	+		OH686_14425	0.61	-0.8
3,015,405	+		OH686_14425	0.61	-2.1
3,015,405	+		OH686_14425	0.61	-0.8
3,015,405	+		OH686_14425	0.61	-0.4
3,015,405	+		OH686_14425	0.61	-2.0
3,015,406	-		OH686_14425	0.61	-0.8
3,015,406	-		OH686_14425	0.61	-3.3
3,015,406	-		OH686_14425	0.61	-0.8
3,015,406	-		OH686_14425	0.61	-2.2
3,015,466	+		OH686_14425	0.66	-1.1
3,015,467	-		OH686_14425	0.66	-2.2
3,015,467	-		OH686_14425	0.66	-2.8
3,015,467	-		OH686_14425	0.66	-1.7
3,015,467	-		OH686_14425	0.66	-0.9
3,015,467	-		OH686_14425	0.66	-1.6
3,015,467	-		OH686_14425	0.66	-1.4
3,015,467	-		OH686_14425	0.66	-3.9
3,015,467	-		OH686_14425	0.66	-0.4
3,015,467	-		OH686_14425	0.66	-1.8
3,015,525	+		OH686_14425	0.71	-4.5
3,015,525	+		OH686_14425	0.71	+0.9
3,015,525	+		OH686_14425	0.71	-1.9
3,015,525	+		OH686_14425	0.71	-1.6
3,015,525	+		OH686_14425	0.71	-0.3
3,015,525	+		OH686_14425	0.71	-1.4
3,015,525	+		OH686_14425	0.71	+2.2
3,015,525	+		OH686_14425	0.71	-1.1
3,015,525	+		OH686_14425	0.71	-0.6
3,015,525	+		OH686_14425	0.71	-0.9
3,015,525	+		OH686_14425	0.71	-1.9
3,015,526	-		OH686_14425	0.71	-2.0
3,015,526	-		OH686_14425	0.71	-1.8
3,015,526	-		OH686_14425	0.71	-1.3
3,015,526	-		OH686_14425	0.71	-3.4
3,015,526	-		OH686_14425	0.71	-0.6
3,015,526	-		OH686_14425	0.71	-0.4
3,015,526	-		OH686_14425	0.71	-2.3
3,015,526	-		OH686_14425	0.71	-1.7
3,015,526	-		OH686_14425	0.71	-2.8
3,015,526	-		OH686_14425	0.71	-0.9
3,015,526	-		OH686_14425	0.71	-0.4
3,015,526	-		OH686_14425	0.71	-1.6
3,015,527	+		OH686_14425	0.71	-1.3
3,015,566	+		OH686_14425	0.74	+0.1
3,015,566	+		OH686_14425	0.74	-2.8
3,015,566	+		OH686_14425	0.74	-0.8
3,015,567	-		OH686_14425	0.74	-1.7
3,015,567	-		OH686_14425	0.74	-2.8
3,015,567	-		OH686_14425	0.74	-3.5
3,015,567	-		OH686_14425	0.74	-2.2
3,015,567	-		OH686_14425	0.74	-0.9
3,015,567	-		OH686_14425	0.74	-1.7
3,015,567	-		OH686_14425	0.74	-2.0
3,015,567	-		OH686_14425	0.74	-1.0