Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_14400 and OH686_14405 are separated by 108 nucleotides OH686_14405 and OH686_14410 are separated by 39 nucleotides
OH686_14400: OH686_14400 - hypothetical protein, at 3,008,385 to 3,009,308
_14400
OH686_14405: OH686_14405 - hypothetical protein, at 3,009,417 to 3,010,166
_14405
OH686_14410: OH686_14410 - Glycosyl transferase, group 1, at 3,010,206 to 3,012,143
_14410
Position (kb)
3009
3010
3011 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3008.426 kb on + strand at 3008.610 kb on + strand, within OH686_14400 at 3008.610 kb on + strand, within OH686_14400 at 3008.610 kb on + strand, within OH686_14400 at 3008.664 kb on + strand, within OH686_14400 at 3008.664 kb on + strand, within OH686_14400 at 3008.664 kb on + strand, within OH686_14400 at 3008.713 kb on + strand, within OH686_14400 at 3008.713 kb on + strand, within OH686_14400 at 3008.713 kb on + strand, within OH686_14400 at 3008.713 kb on + strand, within OH686_14400 at 3008.731 kb on + strand, within OH686_14400 at 3008.731 kb on + strand, within OH686_14400 at 3008.731 kb on + strand, within OH686_14400 at 3008.731 kb on + strand, within OH686_14400 at 3008.731 kb on + strand, within OH686_14400 at 3008.731 kb on + strand, within OH686_14400 at 3008.731 kb on + strand, within OH686_14400 at 3008.775 kb on + strand, within OH686_14400 at 3008.775 kb on + strand, within OH686_14400 at 3008.828 kb on + strand, within OH686_14400 at 3008.828 kb on + strand, within OH686_14400 at 3008.943 kb on + strand, within OH686_14400 at 3008.968 kb on + strand, within OH686_14400 at 3009.023 kb on + strand, within OH686_14400 at 3009.079 kb on + strand, within OH686_14400 at 3009.187 kb on + strand, within OH686_14400 at 3009.187 kb on + strand, within OH686_14400 at 3009.190 kb on + strand, within OH686_14400 at 3009.190 kb on + strand, within OH686_14400 at 3009.269 kb on + strand at 3009.311 kb on - strand at 3009.366 kb on + strand at 3009.366 kb on + strand at 3009.367 kb on - strand at 3009.374 kb on + strand at 3009.375 kb on - strand at 3009.378 kb on - strand at 3009.476 kb on + strand at 3009.527 kb on + strand, within OH686_14405 at 3009.527 kb on + strand, within OH686_14405 at 3009.527 kb on + strand, within OH686_14405 at 3009.578 kb on + strand, within OH686_14405 at 3009.685 kb on + strand, within OH686_14405 at 3009.687 kb on + strand, within OH686_14405 at 3009.687 kb on + strand, within OH686_14405 at 3009.962 kb on + strand, within OH686_14405 at 3009.962 kb on + strand, within OH686_14405 at 3009.967 kb on + strand, within OH686_14405 at 3009.968 kb on - strand, within OH686_14405 at 3009.997 kb on + strand, within OH686_14405 at 3009.998 kb on - strand, within OH686_14405 at 3009.998 kb on - strand, within OH686_14405 at 3010.075 kb on + strand, within OH686_14405 at 3010.075 kb on + strand, within OH686_14405 at 3010.076 kb on - strand, within OH686_14405 at 3010.076 kb on - strand, within OH686_14405 at 3010.090 kb on + strand, within OH686_14405 at 3010.090 kb on + strand, within OH686_14405 at 3010.090 kb on + strand, within OH686_14405 at 3010.222 kb on + strand at 3010.244 kb on + strand at 3010.339 kb on + strand at 3010.371 kb on + strand at 3010.373 kb on + strand at 3010.388 kb on + strand at 3010.527 kb on + strand, within OH686_14410 at 3010.527 kb on + strand, within OH686_14410 at 3010.566 kb on + strand, within OH686_14410 at 3010.566 kb on + strand, within OH686_14410 at 3010.685 kb on + strand, within OH686_14410 at 3010.698 kb on + strand, within OH686_14410 at 3010.698 kb on + strand, within OH686_14410 at 3010.698 kb on + strand, within OH686_14410 at 3010.757 kb on + strand, within OH686_14410 at 3010.792 kb on + strand, within OH686_14410 at 3010.930 kb on + strand, within OH686_14410 at 3010.930 kb on + strand, within OH686_14410 at 3010.930 kb on + strand, within OH686_14410 at 3010.930 kb on + strand, within OH686_14410 at 3010.988 kb on + strand, within OH686_14410 at 3011.054 kb on + strand, within OH686_14410 at 3011.054 kb on + strand, within OH686_14410 at 3011.054 kb on + strand, within OH686_14410 at 3011.054 kb on + strand, within OH686_14410 at 3011.054 kb on + strand, within OH686_14410 at 3011.139 kb on + strand, within OH686_14410 at 3011.139 kb on + strand, within OH686_14410
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 3,008,426 + -0.4 3,008,610 + OH686_14400 0.24 -0.1 3,008,610 + OH686_14400 0.24 -2.1 3,008,610 + OH686_14400 0.24 -2.1 3,008,664 + OH686_14400 0.30 -0.0 3,008,664 + OH686_14400 0.30 -0.9 3,008,664 + OH686_14400 0.30 -0.6 3,008,713 + OH686_14400 0.35 -1.3 3,008,713 + OH686_14400 0.35 +0.5 3,008,713 + OH686_14400 0.35 -1.1 3,008,713 + OH686_14400 0.35 -0.8 3,008,731 + OH686_14400 0.37 -0.5 3,008,731 + OH686_14400 0.37 -1.8 3,008,731 + OH686_14400 0.37 -1.4 3,008,731 + OH686_14400 0.37 +0.0 3,008,731 + OH686_14400 0.37 -0.1 3,008,731 + OH686_14400 0.37 +0.3 3,008,731 + OH686_14400 0.37 -2.4 3,008,775 + OH686_14400 0.42 +0.6 3,008,775 + OH686_14400 0.42 -1.0 3,008,828 + OH686_14400 0.48 +1.9 3,008,828 + OH686_14400 0.48 -0.0 3,008,943 + OH686_14400 0.60 +0.2 3,008,968 + OH686_14400 0.63 -0.1 3,009,023 + OH686_14400 0.69 -1.0 3,009,079 + OH686_14400 0.75 +0.2 3,009,187 + OH686_14400 0.87 -0.8 3,009,187 + OH686_14400 0.87 -0.5 3,009,190 + OH686_14400 0.87 +0.6 3,009,190 + OH686_14400 0.87 +0.3 3,009,269 + -1.6 3,009,311 - -1.0 3,009,366 + -2.0 3,009,366 + -1.7 3,009,367 - -0.9 3,009,374 + +0.2 3,009,375 - +0.9 3,009,378 - -2.3 3,009,476 + -0.3 3,009,527 + OH686_14405 0.15 -0.4 3,009,527 + OH686_14405 0.15 -1.5 3,009,527 + OH686_14405 0.15 +0.1 3,009,578 + OH686_14405 0.21 +1.0 3,009,685 + OH686_14405 0.36 -1.1 3,009,687 + OH686_14405 0.36 -1.0 3,009,687 + OH686_14405 0.36 +0.3 3,009,962 + OH686_14405 0.73 -0.5 3,009,962 + OH686_14405 0.73 +0.5 3,009,967 + OH686_14405 0.73 -0.8 3,009,968 - OH686_14405 0.73 -0.7 3,009,997 + OH686_14405 0.77 -0.4 3,009,998 - OH686_14405 0.77 -0.4 3,009,998 - OH686_14405 0.77 -0.1 3,010,075 + OH686_14405 0.88 -0.1 3,010,075 + OH686_14405 0.88 -0.6 3,010,076 - OH686_14405 0.88 -0.4 3,010,076 - OH686_14405 0.88 -1.4 3,010,090 + OH686_14405 0.90 -1.0 3,010,090 + OH686_14405 0.90 -1.0 3,010,090 + OH686_14405 0.90 +0.9 3,010,222 + -2.0 3,010,244 + +0.3 3,010,339 + -1.3 3,010,371 + +0.3 3,010,373 + +0.0 3,010,388 + -0.7 3,010,527 + OH686_14410 0.17 -0.7 3,010,527 + OH686_14410 0.17 -1.0 3,010,566 + OH686_14410 0.19 -0.1 3,010,566 + OH686_14410 0.19 +0.9 3,010,685 + OH686_14410 0.25 -0.9 3,010,698 + OH686_14410 0.25 -0.1 3,010,698 + OH686_14410 0.25 -0.1 3,010,698 + OH686_14410 0.25 -2.2 3,010,757 + OH686_14410 0.28 -0.1 3,010,792 + OH686_14410 0.30 -1.6 3,010,930 + OH686_14410 0.37 -0.1 3,010,930 + OH686_14410 0.37 -1.4 3,010,930 + OH686_14410 0.37 -1.0 3,010,930 + OH686_14410 0.37 -0.1 3,010,988 + OH686_14410 0.40 -0.1 3,011,054 + OH686_14410 0.44 -0.1 3,011,054 + OH686_14410 0.44 -1.4 3,011,054 + OH686_14410 0.44 -1.1 3,011,054 + OH686_14410 0.44 -1.4 3,011,054 + OH686_14410 0.44 -1.7 3,011,139 + OH686_14410 0.48 -0.4 3,011,139 + OH686_14410 0.48 -1.4
Or see this region's nucleotide sequence