Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_11495 and OH686_11500 are separated by 272 nucleotides OH686_11500 and OH686_11505 are separated by 104 nucleotides
OH686_11495: OH686_11495 - Transcriptional regulator, AcrR family, at 2,371,153 to 2,371,794
_11495
OH686_11500: OH686_11500 - N-carbamoylputrescine amidase, at 2,372,067 to 2,372,948
_11500
OH686_11505: OH686_11505 - agmatine deiminase, at 2,373,053 to 2,374,159
_11505
Position (kb)
2372
2373 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2371.068 kb on + strand at 2371.068 kb on + strand at 2371.068 kb on + strand at 2371.069 kb on - strand at 2371.069 kb on - strand at 2371.069 kb on - strand at 2371.069 kb on - strand at 2371.125 kb on + strand at 2371.125 kb on + strand at 2371.270 kb on + strand, within OH686_11495 at 2371.270 kb on + strand, within OH686_11495 at 2371.270 kb on + strand, within OH686_11495 at 2371.270 kb on + strand, within OH686_11495 at 2371.270 kb on + strand, within OH686_11495 at 2371.270 kb on + strand, within OH686_11495 at 2371.270 kb on + strand, within OH686_11495 at 2371.270 kb on + strand, within OH686_11495 at 2371.271 kb on - strand, within OH686_11495 at 2371.271 kb on - strand, within OH686_11495 at 2371.271 kb on - strand, within OH686_11495 at 2371.271 kb on - strand, within OH686_11495 at 2371.271 kb on - strand, within OH686_11495 at 2371.271 kb on - strand, within OH686_11495 at 2371.271 kb on - strand, within OH686_11495 at 2371.271 kb on - strand, within OH686_11495 at 2371.271 kb on - strand, within OH686_11495 at 2371.312 kb on + strand, within OH686_11495 at 2371.312 kb on + strand, within OH686_11495 at 2371.312 kb on + strand, within OH686_11495 at 2371.312 kb on + strand, within OH686_11495 at 2371.312 kb on + strand, within OH686_11495 at 2371.313 kb on - strand, within OH686_11495 at 2371.313 kb on - strand, within OH686_11495 at 2371.468 kb on + strand, within OH686_11495 at 2371.468 kb on + strand, within OH686_11495 at 2371.468 kb on + strand, within OH686_11495 at 2371.468 kb on + strand, within OH686_11495 at 2371.468 kb on + strand, within OH686_11495 at 2371.469 kb on - strand, within OH686_11495 at 2371.469 kb on - strand, within OH686_11495 at 2371.663 kb on + strand, within OH686_11495 at 2371.663 kb on + strand, within OH686_11495 at 2371.663 kb on + strand, within OH686_11495 at 2371.664 kb on - strand, within OH686_11495 at 2371.664 kb on - strand, within OH686_11495 at 2371.664 kb on - strand, within OH686_11495 at 2371.664 kb on - strand, within OH686_11495 at 2371.664 kb on - strand, within OH686_11495 at 2371.738 kb on + strand at 2371.738 kb on + strand at 2371.739 kb on - strand at 2371.739 kb on - strand at 2371.739 kb on - strand at 2371.739 kb on - strand at 2371.750 kb on + strand at 2371.750 kb on + strand at 2371.750 kb on + strand at 2371.750 kb on + strand at 2371.751 kb on - strand at 2371.751 kb on - strand at 2371.751 kb on - strand at 2371.751 kb on - strand at 2371.751 kb on - strand at 2371.793 kb on - strand at 2371.793 kb on - strand at 2371.793 kb on - strand at 2371.813 kb on - strand at 2371.833 kb on - strand at 2371.833 kb on - strand at 2371.868 kb on + strand at 2371.868 kb on + strand at 2371.888 kb on + strand at 2371.888 kb on + strand at 2371.888 kb on + strand at 2371.888 kb on + strand at 2371.888 kb on + strand at 2371.888 kb on + strand at 2371.889 kb on - strand at 2371.889 kb on - strand at 2371.892 kb on + strand at 2371.893 kb on - strand at 2372.024 kb on + strand at 2372.024 kb on + strand at 2372.025 kb on - strand at 2372.025 kb on - strand at 2372.025 kb on - strand at 2372.025 kb on - strand at 2372.025 kb on - strand at 2372.214 kb on + strand, within OH686_11500 at 2372.214 kb on + strand, within OH686_11500 at 2372.214 kb on + strand, within OH686_11500 at 2372.214 kb on + strand, within OH686_11500 at 2372.215 kb on - strand, within OH686_11500 at 2372.215 kb on - strand, within OH686_11500 at 2372.215 kb on - strand, within OH686_11500 at 2372.215 kb on - strand, within OH686_11500 at 2372.215 kb on - strand, within OH686_11500 at 2372.215 kb on - strand, within OH686_11500 at 2372.215 kb on - strand, within OH686_11500 at 2372.241 kb on + strand, within OH686_11500 at 2372.241 kb on + strand, within OH686_11500 at 2372.241 kb on + strand, within OH686_11500 at 2372.337 kb on + strand, within OH686_11500 at 2372.337 kb on + strand, within OH686_11500 at 2372.337 kb on + strand, within OH686_11500 at 2372.337 kb on + strand, within OH686_11500 at 2372.337 kb on + strand, within OH686_11500 at 2372.337 kb on + strand, within OH686_11500 at 2372.337 kb on + strand, within OH686_11500 at 2372.337 kb on + strand, within OH686_11500 at 2372.338 kb on - strand, within OH686_11500 at 2372.338 kb on - strand, within OH686_11500 at 2372.338 kb on - strand, within OH686_11500 at 2372.338 kb on - strand, within OH686_11500 at 2372.338 kb on - strand, within OH686_11500 at 2372.338 kb on - strand, within OH686_11500 at 2372.409 kb on + strand, within OH686_11500 at 2372.410 kb on - strand, within OH686_11500 at 2372.410 kb on - strand, within OH686_11500 at 2372.454 kb on + strand, within OH686_11500 at 2372.454 kb on + strand, within OH686_11500 at 2372.454 kb on + strand, within OH686_11500 at 2372.454 kb on + strand, within OH686_11500 at 2372.454 kb on + strand, within OH686_11500 at 2372.454 kb on + strand, within OH686_11500 at 2372.454 kb on + strand, within OH686_11500 at 2372.454 kb on + strand, within OH686_11500 at 2372.455 kb on - strand, within OH686_11500 at 2372.455 kb on - strand, within OH686_11500 at 2372.455 kb on - strand, within OH686_11500 at 2372.455 kb on - strand, within OH686_11500 at 2372.455 kb on - strand, within OH686_11500 at 2372.457 kb on + strand, within OH686_11500 at 2372.457 kb on + strand, within OH686_11500 at 2372.458 kb on - strand, within OH686_11500 at 2372.458 kb on - strand, within OH686_11500 at 2372.458 kb on - strand, within OH686_11500 at 2372.458 kb on - strand, within OH686_11500 at 2372.458 kb on - strand, within OH686_11500 at 2372.458 kb on - strand, within OH686_11500 at 2372.458 kb on - strand, within OH686_11500 at 2372.458 kb on - strand, within OH686_11500 at 2372.458 kb on - strand, within OH686_11500 at 2372.502 kb on + strand, within OH686_11500 at 2372.592 kb on + strand, within OH686_11500 at 2372.659 kb on + strand, within OH686_11500 at 2372.659 kb on + strand, within OH686_11500 at 2372.660 kb on - strand, within OH686_11500 at 2372.660 kb on - strand, within OH686_11500 at 2372.751 kb on + strand, within OH686_11500 at 2372.751 kb on + strand, within OH686_11500 at 2372.751 kb on + strand, within OH686_11500 at 2372.752 kb on - strand, within OH686_11500 at 2372.752 kb on - strand, within OH686_11500 at 2372.752 kb on - strand, within OH686_11500 at 2372.752 kb on - strand, within OH686_11500 at 2372.752 kb on - strand, within OH686_11500 at 2372.752 kb on - strand, within OH686_11500 at 2372.904 kb on + strand at 2372.904 kb on + strand at 2372.904 kb on + strand at 2372.904 kb on + strand at 2372.904 kb on + strand at 2372.904 kb on + strand at 2372.904 kb on + strand at 2372.904 kb on + strand at 2372.904 kb on + strand at 2372.904 kb on + strand at 2372.905 kb on - strand at 2372.905 kb on - strand at 2372.905 kb on - strand at 2372.905 kb on - strand at 2372.905 kb on - strand at 2372.905 kb on - strand at 2372.905 kb on - strand at 2372.905 kb on - strand at 2372.905 kb on - strand at 2372.905 kb on - strand at 2372.905 kb on - strand at 2373.028 kb on + strand at 2373.028 kb on + strand at 2373.028 kb on + strand at 2373.028 kb on + strand at 2373.028 kb on + strand at 2373.029 kb on - strand at 2373.029 kb on - strand at 2373.029 kb on - strand at 2373.029 kb on - strand at 2373.029 kb on - strand at 2373.039 kb on + strand at 2373.257 kb on + strand, within OH686_11505 at 2373.258 kb on - strand, within OH686_11505 at 2373.258 kb on - strand, within OH686_11505 at 2373.429 kb on - strand, within OH686_11505 at 2373.722 kb on + strand, within OH686_11505 at 2373.722 kb on + strand, within OH686_11505 at 2373.722 kb on + strand, within OH686_11505 at 2373.722 kb on + strand, within OH686_11505 at 2373.722 kb on + strand, within OH686_11505 at 2373.722 kb on + strand, within OH686_11505 at 2373.722 kb on + strand, within OH686_11505 at 2373.723 kb on - strand, within OH686_11505 at 2373.723 kb on - strand, within OH686_11505 at 2373.723 kb on - strand, within OH686_11505 at 2373.723 kb on - strand, within OH686_11505 at 2373.723 kb on - strand, within OH686_11505 at 2373.723 kb on - strand, within OH686_11505 at 2373.723 kb on - strand, within OH686_11505 at 2373.723 kb on - strand, within OH686_11505 at 2373.723 kb on - strand, within OH686_11505 at 2373.779 kb on + strand, within OH686_11505 at 2373.779 kb on + strand, within OH686_11505 at 2373.779 kb on + strand, within OH686_11505 at 2373.780 kb on - strand, within OH686_11505 at 2373.780 kb on - strand, within OH686_11505 at 2373.780 kb on - strand, within OH686_11505 at 2373.780 kb on - strand, within OH686_11505 at 2373.780 kb on - strand, within OH686_11505
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 2,371,068 + -0.3 2,371,068 + +0.1 2,371,068 + +0.5 2,371,069 - +0.2 2,371,069 - +1.9 2,371,069 - -1.1 2,371,069 - -2.6 2,371,125 + +0.2 2,371,125 + +0.0 2,371,270 + OH686_11495 0.18 -0.7 2,371,270 + OH686_11495 0.18 -0.6 2,371,270 + OH686_11495 0.18 -0.5 2,371,270 + OH686_11495 0.18 -0.0 2,371,270 + OH686_11495 0.18 +0.9 2,371,270 + OH686_11495 0.18 -0.0 2,371,270 + OH686_11495 0.18 +0.2 2,371,270 + OH686_11495 0.18 -0.3 2,371,271 - OH686_11495 0.18 +0.9 2,371,271 - OH686_11495 0.18 +0.5 2,371,271 - OH686_11495 0.18 +0.6 2,371,271 - OH686_11495 0.18 -0.8 2,371,271 - OH686_11495 0.18 +0.9 2,371,271 - OH686_11495 0.18 -0.8 2,371,271 - OH686_11495 0.18 -2.2 2,371,271 - OH686_11495 0.18 -0.3 2,371,271 - OH686_11495 0.18 +0.5 2,371,312 + OH686_11495 0.25 -0.6 2,371,312 + OH686_11495 0.25 -0.6 2,371,312 + OH686_11495 0.25 -0.8 2,371,312 + OH686_11495 0.25 -0.5 2,371,312 + OH686_11495 0.25 -0.5 2,371,313 - OH686_11495 0.25 -0.6 2,371,313 - OH686_11495 0.25 +0.0 2,371,468 + OH686_11495 0.49 -0.8 2,371,468 + OH686_11495 0.49 -0.4 2,371,468 + OH686_11495 0.49 -0.0 2,371,468 + OH686_11495 0.49 +1.0 2,371,468 + OH686_11495 0.49 -0.3 2,371,469 - OH686_11495 0.49 +1.0 2,371,469 - OH686_11495 0.49 -0.7 2,371,663 + OH686_11495 0.79 -0.8 2,371,663 + OH686_11495 0.79 -0.7 2,371,663 + OH686_11495 0.79 -0.4 2,371,664 - OH686_11495 0.80 +1.9 2,371,664 - OH686_11495 0.80 -0.3 2,371,664 - OH686_11495 0.80 +1.5 2,371,664 - OH686_11495 0.80 +0.6 2,371,664 - OH686_11495 0.80 -0.2 2,371,738 + +0.1 2,371,738 + -0.6 2,371,739 - -0.9 2,371,739 - -0.5 2,371,739 - -0.4 2,371,739 - -0.3 2,371,750 + +0.3 2,371,750 + -1.5 2,371,750 + +0.2 2,371,750 + -0.5 2,371,751 - +0.4 2,371,751 - +0.6 2,371,751 - -0.4 2,371,751 - -0.1 2,371,751 - +1.1 2,371,793 - -0.8 2,371,793 - +0.6 2,371,793 - +0.4 2,371,813 - +0.1 2,371,833 - +0.1 2,371,833 - -0.5 2,371,868 + +1.1 2,371,868 + +0.3 2,371,888 + -0.7 2,371,888 + -0.1 2,371,888 + +0.0 2,371,888 + +1.1 2,371,888 + +1.5 2,371,888 + +0.1 2,371,889 - +0.4 2,371,889 - -0.4 2,371,892 + -0.3 2,371,893 - -0.2 2,372,024 + +0.2 2,372,024 + -0.4 2,372,025 - -0.1 2,372,025 - +1.3 2,372,025 - +0.7 2,372,025 - -1.0 2,372,025 - +0.4 2,372,214 + OH686_11500 0.17 -0.7 2,372,214 + OH686_11500 0.17 +0.6 2,372,214 + OH686_11500 0.17 +0.3 2,372,214 + OH686_11500 0.17 +0.4 2,372,215 - OH686_11500 0.17 -0.1 2,372,215 - OH686_11500 0.17 -0.7 2,372,215 - OH686_11500 0.17 +0.1 2,372,215 - OH686_11500 0.17 +1.4 2,372,215 - OH686_11500 0.17 -0.7 2,372,215 - OH686_11500 0.17 -0.7 2,372,215 - OH686_11500 0.17 +0.2 2,372,241 + OH686_11500 0.20 -0.4 2,372,241 + OH686_11500 0.20 +0.2 2,372,241 + OH686_11500 0.20 -0.3 2,372,337 + OH686_11500 0.31 +1.0 2,372,337 + OH686_11500 0.31 -0.4 2,372,337 + OH686_11500 0.31 -0.3 2,372,337 + OH686_11500 0.31 -0.4 2,372,337 + OH686_11500 0.31 +0.7 2,372,337 + OH686_11500 0.31 -0.1 2,372,337 + OH686_11500 0.31 +0.3 2,372,337 + OH686_11500 0.31 +0.1 2,372,338 - OH686_11500 0.31 -2.1 2,372,338 - OH686_11500 0.31 -1.1 2,372,338 - OH686_11500 0.31 -0.9 2,372,338 - OH686_11500 0.31 -0.5 2,372,338 - OH686_11500 0.31 +0.0 2,372,338 - OH686_11500 0.31 +0.3 2,372,409 + OH686_11500 0.39 -0.2 2,372,410 - OH686_11500 0.39 +2.0 2,372,410 - OH686_11500 0.39 +0.6 2,372,454 + OH686_11500 0.44 +0.1 2,372,454 + OH686_11500 0.44 -0.1 2,372,454 + OH686_11500 0.44 +0.3 2,372,454 + OH686_11500 0.44 -0.4 2,372,454 + OH686_11500 0.44 +0.9 2,372,454 + OH686_11500 0.44 +0.0 2,372,454 + OH686_11500 0.44 +0.2 2,372,454 + OH686_11500 0.44 -0.8 2,372,455 - OH686_11500 0.44 +0.5 2,372,455 - OH686_11500 0.44 +0.6 2,372,455 - OH686_11500 0.44 -0.3 2,372,455 - OH686_11500 0.44 +0.6 2,372,455 - OH686_11500 0.44 -0.6 2,372,457 + OH686_11500 0.44 -0.7 2,372,457 + OH686_11500 0.44 -0.3 2,372,458 - OH686_11500 0.44 -0.6 2,372,458 - OH686_11500 0.44 -0.2 2,372,458 - OH686_11500 0.44 -0.5 2,372,458 - OH686_11500 0.44 +0.4 2,372,458 - OH686_11500 0.44 +0.6 2,372,458 - OH686_11500 0.44 +0.1 2,372,458 - OH686_11500 0.44 +0.8 2,372,458 - OH686_11500 0.44 +0.2 2,372,458 - OH686_11500 0.44 -0.7 2,372,502 + OH686_11500 0.49 -0.1 2,372,592 + OH686_11500 0.60 +0.6 2,372,659 + OH686_11500 0.67 +0.2 2,372,659 + OH686_11500 0.67 -0.3 2,372,660 - OH686_11500 0.67 -0.3 2,372,660 - OH686_11500 0.67 -0.8 2,372,751 + OH686_11500 0.78 -1.0 2,372,751 + OH686_11500 0.78 +1.2 2,372,751 + OH686_11500 0.78 +0.3 2,372,752 - OH686_11500 0.78 -0.5 2,372,752 - OH686_11500 0.78 +0.0 2,372,752 - OH686_11500 0.78 -0.1 2,372,752 - OH686_11500 0.78 -1.2 2,372,752 - OH686_11500 0.78 -1.4 2,372,752 - OH686_11500 0.78 +0.2 2,372,904 + -0.4 2,372,904 + +0.1 2,372,904 + +0.2 2,372,904 + -0.2 2,372,904 + +0.3 2,372,904 + -0.3 2,372,904 + +0.1 2,372,904 + +0.6 2,372,904 + -0.4 2,372,904 + +0.2 2,372,905 - +0.5 2,372,905 - +0.5 2,372,905 - +0.4 2,372,905 - -1.1 2,372,905 - -0.1 2,372,905 - -1.5 2,372,905 - +1.4 2,372,905 - -1.6 2,372,905 - -0.6 2,372,905 - -0.5 2,372,905 - -1.2 2,373,028 + +0.7 2,373,028 + +0.2 2,373,028 + -0.0 2,373,028 + +0.2 2,373,028 + +0.4 2,373,029 - +0.3 2,373,029 - +0.4 2,373,029 - -0.1 2,373,029 - +0.0 2,373,029 - +0.4 2,373,039 + +0.2 2,373,257 + OH686_11505 0.18 -0.5 2,373,258 - OH686_11505 0.19 -0.2 2,373,258 - OH686_11505 0.19 -0.1 2,373,429 - OH686_11505 0.34 -1.8 2,373,722 + OH686_11505 0.60 +1.2 2,373,722 + OH686_11505 0.60 -0.5 2,373,722 + OH686_11505 0.60 -0.1 2,373,722 + OH686_11505 0.60 +0.4 2,373,722 + OH686_11505 0.60 +0.7 2,373,722 + OH686_11505 0.60 -0.5 2,373,722 + OH686_11505 0.60 +0.9 2,373,723 - OH686_11505 0.61 +0.3 2,373,723 - OH686_11505 0.61 +0.7 2,373,723 - OH686_11505 0.61 +2.7 2,373,723 - OH686_11505 0.61 +0.3 2,373,723 - OH686_11505 0.61 -0.6 2,373,723 - OH686_11505 0.61 +0.8 2,373,723 - OH686_11505 0.61 -1.9 2,373,723 - OH686_11505 0.61 -0.0 2,373,723 - OH686_11505 0.61 +0.9 2,373,779 + OH686_11505 0.66 +0.0 2,373,779 + OH686_11505 0.66 +0.4 2,373,779 + OH686_11505 0.66 +0.9 2,373,780 - OH686_11505 0.66 -0.3 2,373,780 - OH686_11505 0.66 -0.1 2,373,780 - OH686_11505 0.66 -2.7 2,373,780 - OH686_11505 0.66 +1.1 2,373,780 - OH686_11505 0.66 -0.1
Or see this region's nucleotide sequence