Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_10155 and OH686_10160 are separated by 107 nucleotides OH686_10160 and OH686_10165 overlap by 8 nucleotides OH686_10165 and OH686_10170 are separated by 21 nucleotides OH686_10170 and OH686_10175 are separated by 3 nucleotides OH686_10175 and OH686_10180 overlap by 4 nucleotides
OH686_10155: OH686_10155 - 2-polyprenylphenol 6-hydroxylase, at 2,085,300 to 2,086,895
_10155
OH686_10160: OH686_10160 - Phosphoribosyl-AMP cyclohydrolase , at 2,087,003 to 2,087,401
_10160
OH686_10165: OH686_10165 - Phosphoribosyl-ATP pyrophosphatase , at 2,087,394 to 2,087,732
_10165
OH686_10170: OH686_10170 - Twin-arginine translocation protein TatA, at 2,087,754 to 2,088,002
_10170
OH686_10175: OH686_10175 - twin arginine-targeting protein translocase TatB, at 2,088,006 to 2,088,380
_10175
OH686_10180: OH686_10180 - twin arginine-targeting protein translocase TatC, at 2,088,377 to 2,089,150
_10180
Position (kb)
2087
2088 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2087.150 kb on + strand, within OH686_10160 at 2087.150 kb on + strand, within OH686_10160 at 2087.150 kb on + strand, within OH686_10160 at 2087.150 kb on + strand, within OH686_10160 at 2087.150 kb on + strand, within OH686_10160 at 2087.150 kb on + strand, within OH686_10160 at 2087.150 kb on + strand, within OH686_10160 at 2087.151 kb on - strand, within OH686_10160 at 2087.151 kb on - strand, within OH686_10160 at 2087.151 kb on - strand, within OH686_10160 at 2087.151 kb on - strand, within OH686_10160 at 2087.151 kb on - strand, within OH686_10160 at 2087.151 kb on - strand, within OH686_10160 at 2087.151 kb on - strand, within OH686_10160 at 2087.151 kb on - strand, within OH686_10160 at 2087.151 kb on - strand, within OH686_10160 at 2087.313 kb on - strand, within OH686_10160 at 2087.378 kb on + strand at 2087.378 kb on + strand at 2087.378 kb on + strand at 2087.378 kb on + strand at 2087.378 kb on + strand at 2087.378 kb on + strand at 2087.378 kb on + strand at 2087.378 kb on + strand at 2087.379 kb on - strand at 2087.379 kb on - strand at 2087.379 kb on - strand at 2087.379 kb on - strand at 2087.379 kb on - strand at 2087.379 kb on - strand at 2087.379 kb on - strand at 2087.463 kb on + strand, within OH686_10165 at 2087.463 kb on + strand, within OH686_10165 at 2087.463 kb on + strand, within OH686_10165 at 2087.463 kb on + strand, within OH686_10165 at 2087.463 kb on + strand, within OH686_10165 at 2087.463 kb on + strand, within OH686_10165 at 2087.463 kb on + strand, within OH686_10165 at 2087.464 kb on - strand, within OH686_10165 at 2087.464 kb on - strand, within OH686_10165 at 2087.464 kb on - strand, within OH686_10165 at 2087.464 kb on - strand, within OH686_10165 at 2087.464 kb on - strand, within OH686_10165 at 2087.464 kb on - strand, within OH686_10165 at 2087.478 kb on + strand, within OH686_10165 at 2087.587 kb on - strand, within OH686_10165 at 2088.408 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 2,087,150 + OH686_10160 0.37 -1.4 2,087,150 + OH686_10160 0.37 -2.6 2,087,150 + OH686_10160 0.37 -2.3 2,087,150 + OH686_10160 0.37 -2.4 2,087,150 + OH686_10160 0.37 -3.3 2,087,150 + OH686_10160 0.37 -1.8 2,087,150 + OH686_10160 0.37 -2.1 2,087,151 - OH686_10160 0.37 -3.5 2,087,151 - OH686_10160 0.37 -3.0 2,087,151 - OH686_10160 0.37 -5.1 2,087,151 - OH686_10160 0.37 -3.4 2,087,151 - OH686_10160 0.37 -3.4 2,087,151 - OH686_10160 0.37 -2.4 2,087,151 - OH686_10160 0.37 -2.4 2,087,151 - OH686_10160 0.37 -4.0 2,087,151 - OH686_10160 0.37 -3.3 2,087,313 - OH686_10160 0.78 -2.0 2,087,378 + -0.4 2,087,378 + -0.2 2,087,378 + +0.7 2,087,378 + -0.6 2,087,378 + -0.6 2,087,378 + +1.4 2,087,378 + +0.4 2,087,378 + -0.2 2,087,379 - +0.2 2,087,379 - -0.8 2,087,379 - +0.6 2,087,379 - -0.7 2,087,379 - -1.0 2,087,379 - -0.5 2,087,379 - -0.5 2,087,463 + OH686_10165 0.20 -0.6 2,087,463 + OH686_10165 0.20 -2.0 2,087,463 + OH686_10165 0.20 -1.7 2,087,463 + OH686_10165 0.20 -1.6 2,087,463 + OH686_10165 0.20 -2.2 2,087,463 + OH686_10165 0.20 -0.1 2,087,463 + OH686_10165 0.20 -1.9 2,087,464 - OH686_10165 0.21 -1.3 2,087,464 - OH686_10165 0.21 -3.3 2,087,464 - OH686_10165 0.21 -2.2 2,087,464 - OH686_10165 0.21 -3.8 2,087,464 - OH686_10165 0.21 -1.9 2,087,464 - OH686_10165 0.21 -1.8 2,087,478 + OH686_10165 0.25 -2.9 2,087,587 - OH686_10165 0.57 -0.7 2,088,408 + -0.1
Or see this region's nucleotide sequence