Strain Fitness in Pseudomonas sp. S08-1 around OH686_05845

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
1,178,286	+		OH686_05835	0.70	-0.1
1,178,287	-		OH686_05835	0.70	-0.9
1,178,287	-		OH686_05835	0.70	-0.7
1,178,287	-		OH686_05835	0.70	-0.3
1,178,337	+		OH686_05835	0.79	-1.0
1,178,337	+		OH686_05835	0.79	-1.5
1,178,337	+		OH686_05835	0.79	-0.1
1,178,338	-		OH686_05835	0.79	-2.2
1,178,455	+				-0.0
1,178,455	+				-0.6
1,178,455	+				+0.4
1,178,455	+				+0.7
1,178,455	+				-0.3
1,178,455	+				-1.7
1,178,455	+				+0.7
1,178,455	+				+0.2
1,178,455	+				-0.1
1,178,455	+				-0.1
1,178,455	+				+0.4
1,178,455	+				-0.4
1,178,455	+				+0.2
1,178,455	+				-0.0
1,178,455	+				+0.0
1,178,455	+				-0.2
1,178,455	+				+0.3
1,178,455	+				+0.2
1,178,455	+				-0.1
1,178,455	+				-0.6
1,178,455	+				+0.2
1,178,455	+				-0.2
1,178,455	+				-0.4
1,178,455	+				+1.1
1,178,455	+				-0.7
1,178,456	-				-0.6
1,178,456	-				-1.3
1,178,456	-				-1.6
1,178,456	-				-0.5
1,178,456	-				-0.1
1,178,456	-				-1.9
1,178,456	-				-0.6
1,178,456	-				+0.7
1,178,456	-				-0.7
1,178,456	-				+0.1
1,178,456	-				-1.1
1,178,456	-				-1.5
1,178,456	-				-0.7
1,178,456	-				-0.8
1,178,456	-				-0.0
1,178,456	-				+1.2
1,178,456	-				+0.2
1,178,456	-				-0.0
1,178,456	-				+0.1
1,178,456	-				+0.4
1,178,456	-				+0.5
1,178,456	-				+0.4
1,178,456	-				-0.1
1,178,456	-				-0.4
1,178,456	-				-1.2
1,178,456	-				-1.0
1,178,457	+				-1.2
1,178,457	+				-1.0
1,178,457	+				-0.6
1,178,457	+				-0.1
1,178,457	+				+1.2
1,178,457	+				+0.5
1,178,457	+				+0.5
1,178,457	+				+1.5
1,178,457	+				-0.9
1,178,457	+				+0.9
1,178,457	+				-0.3
1,178,457	+				-0.9
1,178,457	+				-0.3
1,178,457	+				+0.5
1,178,457	+				+0.2
1,178,457	+				-0.6
1,178,458	-				+0.6
1,178,458	-				-0.7
1,178,458	-				-0.1
1,178,458	-				-0.1
1,178,458	-				+0.7
1,178,458	-				-0.0
1,178,458	-				+0.6
1,178,458	-				-0.5
1,178,458	-				-0.4
1,178,458	-				-0.1
1,178,458	-				-0.2
1,178,518	+				+0.4
1,178,519	-				+1.1
1,178,589	+				-0.4
1,178,589	+				+0.2
1,178,589	+				+0.4
1,178,589	+				-1.8
1,178,589	+				+0.6
1,178,589	+				-0.3
1,178,589	+				-0.5
1,178,590	-				+0.3
1,178,590	-				+1.1
1,178,590	-				+0.0
1,178,590	-				-0.3
1,178,590	-				-0.0
1,178,590	-				+0.1
1,178,590	-				-0.8
1,178,590	-				-1.4
1,178,758	+		OH686_05840	0.81	-0.0
1,178,758	+		OH686_05840	0.81	-0.8
1,178,758	+		OH686_05840	0.81	+0.1
1,178,759	-		OH686_05840	0.81	-0.2
1,178,799	+				-0.2
1,178,799	+				-0.3
1,178,799	+				-0.0
1,178,799	+				+0.8
1,178,799	+				-0.3
1,178,800	-				-1.0
1,178,800	-				-0.1
1,178,800	-				-0.2
1,178,800	-				+0.0
1,178,800	-				+0.5
1,178,800	-				-0.6
1,179,043	+		OH686_05845	0.31	-0.2
1,179,043	+		OH686_05845	0.31	+0.2
1,179,043	+		OH686_05845	0.31	+0.3
1,179,043	+		OH686_05845	0.31	-1.3
1,179,043	+		OH686_05845	0.31	-0.5
1,179,043	+		OH686_05845	0.31	+0.5
1,179,043	+		OH686_05845	0.31	+0.2
1,179,043	+		OH686_05845	0.31	-1.1
1,179,043	+		OH686_05845	0.31	-2.4
1,179,043	+		OH686_05845	0.31	-0.9
1,179,043	+		OH686_05845	0.31	-0.4
1,179,044	-		OH686_05845	0.31	-0.6
1,179,044	-		OH686_05845	0.31	+0.1
1,179,044	-		OH686_05845	0.31	+0.6
1,179,044	-		OH686_05845	0.31	+0.4
1,179,044	-		OH686_05845	0.31	-0.9
1,179,044	-		OH686_05845	0.31	-0.2
1,179,044	-		OH686_05845	0.31	+0.0
1,179,044	-		OH686_05845	0.31	-0.2
1,179,044	-		OH686_05845	0.31	-0.8
1,179,049	+		OH686_05845	0.32	-0.3
1,179,049	+		OH686_05845	0.32	+0.1
1,179,049	+		OH686_05845	0.32	-1.4
1,179,049	+		OH686_05845	0.32	+0.3
1,179,049	+		OH686_05845	0.32	-0.6
1,179,049	+		OH686_05845	0.32	+0.5
1,179,049	+		OH686_05845	0.32	+0.5
1,179,049	+		OH686_05845	0.32	+0.0
1,179,049	+		OH686_05845	0.32	-0.4
1,179,049	+		OH686_05845	0.32	+0.7
1,179,050	-		OH686_05845	0.32	-0.0
1,179,050	-		OH686_05845	0.32	-0.8
1,179,050	-		OH686_05845	0.32	-0.0
1,179,050	-		OH686_05845	0.32	-0.0
1,179,050	-		OH686_05845	0.32	+0.7
1,179,050	-		OH686_05845	0.32	-0.2
1,179,050	-		OH686_05845	0.32	-0.7
1,179,050	-		OH686_05845	0.32	-0.7
1,179,050	-		OH686_05845	0.32	-0.5
1,179,050	-		OH686_05845	0.32	+0.3
1,179,050	-		OH686_05845	0.32	-1.6
1,179,221	+		OH686_05845	0.55	+0.3
1,179,221	+		OH686_05845	0.55	-0.2
1,179,222	-		OH686_05845	0.56	+0.2
1,179,222	-		OH686_05845	0.56	-0.5
1,179,325	+		OH686_05845	0.70	+0.7
1,179,325	+		OH686_05845	0.70	+0.1
1,179,325	+		OH686_05845	0.70	+0.4
1,179,325	+		OH686_05845	0.70	+0.3
1,179,326	-		OH686_05845	0.70	-0.8
1,179,326	-		OH686_05845	0.70	-0.3
1,179,326	-		OH686_05845	0.70	+0.6
1,179,326	-		OH686_05845	0.70	+0.4
1,179,326	-		OH686_05845	0.70	+0.4
1,179,326	-		OH686_05845	0.70	-0.4
1,179,326	-		OH686_05845	0.70	-0.6
1,179,383	+		OH686_05845	0.77	+0.0
1,179,421	+		OH686_05845	0.83	-0.8
1,179,422	-		OH686_05845	0.83	-0.3
1,179,422	-		OH686_05845	0.83	+0.3
1,179,422	-		OH686_05845	0.83	+0.4
1,179,422	-		OH686_05845	0.83	-0.1
1,179,422	-		OH686_05845	0.83	+1.9
1,179,422	-		OH686_05845	0.83	-0.5
1,179,422	-		OH686_05845	0.83	-0.9
1,179,491	+				+0.4
1,179,491	+				-2.4
1,179,492	-				+0.1
1,179,547	+				-2.3
1,179,547	+				+0.8
1,179,547	+				+0.4
1,179,547	+				+0.5
1,179,547	+				-0.2
1,179,547	+				+0.2
1,179,547	+				-0.1
1,179,547	+				-1.4
1,179,547	+				-0.5
1,179,547	+				+1.6
1,179,547	+				-0.1
1,179,547	+				-1.0
1,179,548	-				-0.3
1,179,548	-				+1.1
1,179,548	-				-0.3
1,179,548	-				+0.6
1,179,548	-				+1.0
1,179,548	-				-0.1
1,179,603	+		OH686_05850	0.20	+0.0
1,179,603	+		OH686_05850	0.20	-1.7
1,179,603	+		OH686_05850	0.20	-0.3
1,179,603	+		OH686_05850	0.20	-0.3
1,179,603	+		OH686_05850	0.20	-0.6
1,179,603	+		OH686_05850	0.20	-0.3
1,179,604	-		OH686_05850	0.21	-1.6
1,179,604	-		OH686_05850	0.21	-0.8
1,179,604	-		OH686_05850	0.21	-0.5
1,179,604	-		OH686_05850	0.21	+0.8
1,179,604	-		OH686_05850	0.21	+0.9
1,179,604	-		OH686_05850	0.21	-0.0
1,179,604	-		OH686_05850	0.21	+0.7
1,179,604	-		OH686_05850	0.21	+0.2
1,179,604	-		OH686_05850	0.21	-0.1
1,179,604	-		OH686_05850	0.21	+0.8
1,179,604	-		OH686_05850	0.21	-2.3
1,179,604	-		OH686_05850	0.21	-0.6
1,179,604	-		OH686_05850	0.21	-0.4
1,179,654	-		OH686_05850	0.40	-1.9
1,179,776	+		OH686_05850	0.88	-0.4
1,179,776	+		OH686_05850	0.88	+0.4
1,179,776	+		OH686_05850	0.88	+1.0
1,179,776	+		OH686_05850	0.88	+0.5
1,179,777	-		OH686_05850	0.89	+0.1
1,179,777	-		OH686_05850	0.89	+0.0
1,179,777	-		OH686_05850	0.89	+0.5
1,179,803	+				+0.1
1,179,804	-				-0.1
1,179,804	-				+1.0
1,179,812	+				-0.3
1,179,812	+				+0.2
1,179,812	+				-0.1
1,179,812	+				-0.3
1,179,812	+				-0.2
1,179,812	+				+0.0
1,179,813	-				-1.3
1,179,813	-				+0.2
1,179,813	-				-0.3
1,179,813	-				+0.1
1,179,813	-				-0.3
1,179,813	-				-0.5
1,179,828	+				-0.3
1,179,828	+				-0.3
1,179,828	+				-0.1
1,179,828	+				-0.4
1,179,828	+				+0.2
1,179,828	+				+0.2
1,179,828	+				+0.1
1,179,828	+				-0.2
1,179,829	-				-0.2
1,179,829	-				+1.3
1,179,829	-				+0.0
1,179,829	-				-0.1
1,179,829	-				+0.6
1,179,829	-				-0.7
1,179,916	+		OH686_05855	0.35	-0.2
1,179,917	+		OH686_05855	0.35	+0.3
1,179,917	+		OH686_05855	0.35	-0.4
1,179,917	+		OH686_05855	0.35	-0.8
1,179,917	+		OH686_05855	0.35	+0.6
1,179,918	-		OH686_05855	0.35	+0.1
1,179,918	-		OH686_05855	0.35	+0.6
1,179,918	-		OH686_05855	0.35	-0.3
1,179,918	-		OH686_05855	0.35	-2.0
1,179,918	-		OH686_05855	0.35	-0.2
1,179,918	-		OH686_05855	0.35	+0.6
1,179,918	-		OH686_05855	0.35	+0.4
1,179,918	-		OH686_05855	0.35	+1.1
1,179,918	-		OH686_05855	0.35	-2.1
1,180,426	+		OH686_05860	0.31	+0.3
1,180,426	+		OH686_05860	0.31	+0.3
1,180,427	-		OH686_05860	0.31	+0.3
1,180,444	+		OH686_05860	0.33	+0.2
1,180,444	+		OH686_05860	0.33	+0.1
1,180,445	-		OH686_05860	0.33	-0.1
1,180,445	-		OH686_05860	0.33	+0.9
1,180,460	+		OH686_05860	0.34	-0.2
1,180,461	-		OH686_05860	0.34	-0.5
1,180,462	+		OH686_05860	0.34	-0.3
1,180,462	+		OH686_05860	0.34	+0.3
1,180,462	+		OH686_05860	0.34	+0.8
1,180,462	+		OH686_05860	0.34	+0.5
1,180,462	+		OH686_05860	0.34	+0.3
1,180,462	+		OH686_05860	0.34	+0.9
1,180,462	+		OH686_05860	0.34	+0.4
1,180,462	+		OH686_05860	0.34	-0.8
1,180,463	-		OH686_05860	0.35	-0.1
1,180,463	-		OH686_05860	0.35	+0.2
1,180,463	-		OH686_05860	0.35	-0.6
1,180,463	-		OH686_05860	0.35	+0.3
1,180,463	-		OH686_05860	0.35	+0.5
1,180,463	-		OH686_05860	0.35	-1.4
1,180,463	-		OH686_05860	0.35	+0.1
1,180,463	-		OH686_05860	0.35	-0.4
1,180,463	-		OH686_05860	0.35	+0.7
1,180,463	-		OH686_05860	0.35	+0.0
1,180,525	+		OH686_05860	0.41	+0.7
1,180,526	-		OH686_05860	0.41	-0.0
1,180,540	+		OH686_05860	0.43	+0.0
1,180,540	+		OH686_05860	0.43	+0.4
1,180,541	-		OH686_05860	0.43	+0.9
1,180,541	-		OH686_05860	0.43	-0.2
1,180,541	-		OH686_05860	0.43	-0.3