Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_03270 and OH686_03275 are separated by 277 nucleotides OH686_03275 and OH686_03280 are separated by 15 nucleotides OH686_03280 and OH686_03285 are separated by 40 nucleotides OH686_03285 and OH686_03290 are separated by 165 nucleotides
OH686_03270: OH686_03270 - Chemotaxis protein CheC -- inhibitor of MCP methylation, at 680,690 to 681,691
_03270
OH686_03275: OH686_03275 - hypothetical protein, at 681,969 to 682,448
_03275
OH686_03280: OH686_03280 - hypothetical protein, at 682,464 to 682,913
_03280
OH686_03285: OH686_03285 - pesticin domain protein, at 682,954 to 683,505
_03285
OH686_03290: OH686_03290 - hypothetical protein, at 683,671 to 684,054
_03290
Position (kb) 682
683 Strain fitness (log2 ratio) -2
-1
0
1
2 at 681.725 kb on - strand at 681.727 kb on + strand at 681.727 kb on + strand at 681.727 kb on + strand at 681.727 kb on + strand at 681.727 kb on + strand at 681.727 kb on + strand at 681.727 kb on + strand at 681.727 kb on + strand at 681.728 kb on - strand at 681.742 kb on + strand at 681.743 kb on - strand at 681.743 kb on - strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.847 kb on + strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 681.848 kb on - strand at 682.041 kb on + strand, within OH686_03275 at 682.042 kb on - strand, within OH686_03275 at 682.042 kb on - strand, within OH686_03275 at 682.042 kb on - strand, within OH686_03275 at 682.093 kb on + strand, within OH686_03275 at 682.139 kb on + strand, within OH686_03275 at 682.139 kb on + strand, within OH686_03275 at 682.218 kb on + strand, within OH686_03275 at 682.218 kb on + strand, within OH686_03275 at 682.218 kb on + strand, within OH686_03275 at 682.219 kb on - strand, within OH686_03275 at 682.219 kb on - strand, within OH686_03275 at 682.284 kb on + strand, within OH686_03275 at 682.284 kb on + strand, within OH686_03275 at 682.285 kb on - strand, within OH686_03275 at 682.285 kb on - strand, within OH686_03275 at 682.285 kb on - strand, within OH686_03275 at 682.285 kb on - strand, within OH686_03275 at 682.311 kb on + strand, within OH686_03275 at 682.312 kb on - strand, within OH686_03275 at 682.410 kb on + strand at 682.480 kb on + strand at 682.480 kb on + strand at 682.480 kb on + strand at 682.480 kb on + strand at 682.480 kb on + strand at 682.480 kb on + strand at 682.480 kb on + strand at 682.480 kb on + strand at 682.481 kb on - strand at 682.481 kb on - strand at 682.481 kb on - strand at 682.481 kb on - strand at 682.481 kb on - strand at 682.481 kb on - strand at 682.635 kb on + strand, within OH686_03280 at 682.636 kb on - strand, within OH686_03280 at 682.899 kb on + strand at 682.899 kb on + strand at 682.899 kb on + strand at 682.899 kb on + strand at 682.900 kb on - strand at 682.900 kb on - strand at 682.900 kb on - strand at 682.900 kb on - strand at 683.404 kb on + strand, within OH686_03285 at 683.404 kb on + strand, within OH686_03285 at 683.405 kb on - strand, within OH686_03285 at 683.438 kb on + strand, within OH686_03285 at 683.495 kb on + strand at 683.606 kb on + strand at 683.606 kb on + strand at 683.607 kb on - strand at 683.629 kb on + strand at 683.629 kb on + strand at 683.630 kb on - strand at 683.630 kb on - strand at 683.640 kb on + strand at 683.640 kb on + strand at 683.640 kb on + strand at 683.640 kb on + strand at 683.640 kb on + strand at 683.640 kb on + strand at 683.640 kb on + strand at 683.641 kb on - strand at 683.641 kb on - strand at 683.641 kb on - strand at 683.641 kb on - strand at 683.641 kb on - strand at 683.641 kb on - strand at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.797 kb on + strand, within OH686_03290 at 683.798 kb on - strand, within OH686_03290 at 683.798 kb on - strand, within OH686_03290 at 683.798 kb on - strand, within OH686_03290 at 683.798 kb on - strand, within OH686_03290 at 683.798 kb on - strand, within OH686_03290 at 683.798 kb on - strand, within OH686_03290 at 683.798 kb on - strand, within OH686_03290 at 683.798 kb on - strand, within OH686_03290 at 683.798 kb on - strand, within OH686_03290 at 683.798 kb on - strand, within OH686_03290 at 683.810 kb on - strand, within OH686_03290 at 683.810 kb on - strand, within OH686_03290
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 681,725 - -1.2 681,727 + +1.0 681,727 + -0.3 681,727 + +0.9 681,727 + -0.4 681,727 + +0.5 681,727 + -1.1 681,727 + -0.3 681,727 + +1.3 681,728 - +0.5 681,742 + +0.5 681,743 - -0.2 681,743 - -1.1 681,847 + +0.4 681,847 + +1.1 681,847 + +0.2 681,847 + +0.4 681,847 + +1.1 681,847 + -0.6 681,847 + +0.6 681,847 + +0.6 681,847 + +0.3 681,847 + +0.6 681,847 + -1.5 681,847 + -1.5 681,847 + -0.1 681,848 - -0.2 681,848 - -1.2 681,848 - -0.0 681,848 - +0.1 681,848 - +0.1 681,848 - +0.1 681,848 - -1.1 681,848 - -1.0 681,848 - -2.2 681,848 - -1.5 681,848 - -0.8 681,848 - -0.6 681,848 - +0.1 681,848 - -0.4 681,848 - +0.4 681,848 - -0.7 682,041 + OH686_03275 0.15 +0.6 682,042 - OH686_03275 0.15 -0.8 682,042 - OH686_03275 0.15 +0.6 682,042 - OH686_03275 0.15 -1.3 682,093 + OH686_03275 0.26 -0.3 682,139 + OH686_03275 0.35 -2.7 682,139 + OH686_03275 0.35 -0.3 682,218 + OH686_03275 0.52 -0.1 682,218 + OH686_03275 0.52 +0.7 682,218 + OH686_03275 0.52 -0.2 682,219 - OH686_03275 0.52 +0.5 682,219 - OH686_03275 0.52 +1.1 682,284 + OH686_03275 0.66 +0.4 682,284 + OH686_03275 0.66 +0.6 682,285 - OH686_03275 0.66 -1.7 682,285 - OH686_03275 0.66 -0.1 682,285 - OH686_03275 0.66 +1.2 682,285 - OH686_03275 0.66 -0.5 682,311 + OH686_03275 0.71 +1.0 682,312 - OH686_03275 0.71 -0.2 682,410 + +0.3 682,480 + +1.5 682,480 + -0.5 682,480 + +0.0 682,480 + -0.1 682,480 + +0.5 682,480 + -1.1 682,480 + -0.4 682,480 + +1.4 682,481 - +0.3 682,481 - +1.4 682,481 - +0.1 682,481 - +0.1 682,481 - +1.0 682,481 - -1.3 682,635 + OH686_03280 0.38 -1.0 682,636 - OH686_03280 0.38 -0.0 682,899 + +0.1 682,899 + -0.5 682,899 + -0.7 682,899 + -0.6 682,900 - -0.5 682,900 - -0.2 682,900 - +0.9 682,900 - -0.0 683,404 + OH686_03285 0.82 +2.3 683,404 + OH686_03285 0.82 -0.2 683,405 - OH686_03285 0.82 +0.1 683,438 + OH686_03285 0.88 -0.1 683,495 + -1.5 683,606 + +1.0 683,606 + -0.2 683,607 - -0.1 683,629 + +0.1 683,629 + -0.1 683,630 - -0.5 683,630 - +0.3 683,640 + +0.4 683,640 + -1.6 683,640 + -0.6 683,640 + +0.1 683,640 + +0.5 683,640 + -0.1 683,640 + +0.3 683,641 - -1.5 683,641 - -0.7 683,641 - +1.3 683,641 - -1.2 683,641 - -0.4 683,641 - +0.1 683,797 + OH686_03290 0.33 +1.0 683,797 + OH686_03290 0.33 -0.1 683,797 + OH686_03290 0.33 +0.1 683,797 + OH686_03290 0.33 -0.2 683,797 + OH686_03290 0.33 +0.3 683,797 + OH686_03290 0.33 -0.2 683,797 + OH686_03290 0.33 -0.6 683,797 + OH686_03290 0.33 -0.8 683,797 + OH686_03290 0.33 -0.4 683,797 + OH686_03290 0.33 +0.1 683,797 + OH686_03290 0.33 -0.1 683,797 + OH686_03290 0.33 +0.3 683,797 + OH686_03290 0.33 -0.5 683,797 + OH686_03290 0.33 +0.4 683,797 + OH686_03290 0.33 -0.6 683,798 - OH686_03290 0.33 +0.8 683,798 - OH686_03290 0.33 +0.3 683,798 - OH686_03290 0.33 -0.7 683,798 - OH686_03290 0.33 +0.7 683,798 - OH686_03290 0.33 -1.0 683,798 - OH686_03290 0.33 +0.0 683,798 - OH686_03290 0.33 +0.8 683,798 - OH686_03290 0.33 +0.2 683,798 - OH686_03290 0.33 +0.4 683,798 - OH686_03290 0.33 +0.4 683,810 - OH686_03290 0.36 +0.8 683,810 - OH686_03290 0.36 +0.3
Or see this region's nucleotide sequence