Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_02190 and OH686_02195 overlap by 1 nucleotides OH686_02195 and OH686_02200 are separated by 18 nucleotides OH686_02200 and OH686_02205 overlap by 4 nucleotides
OH686_02190: OH686_02190 - cytochrome c oxidase, cbb3-type, subunit I, at 470,932 to 472,374
_02190
OH686_02195: OH686_02195 - cytochrome c oxidase, cbb3-type, subunit II, at 472,374 to 472,991
_02195
OH686_02200: OH686_02200 - Cytochrome c oxidase (cbb3-type) subunit CcoQ , at 473,010 to 473,183
_02200
OH686_02205: OH686_02205 - cytochrome c oxidase, cbb3-type, subunit III, at 473,180 to 474,157
_02205
Position (kb) 472
473 Strain fitness (log2 ratio) -2
-1
0
1
2 at 471.406 kb on + strand, within OH686_02190 at 471.406 kb on + strand, within OH686_02190 at 471.406 kb on + strand, within OH686_02190 at 471.406 kb on + strand, within OH686_02190 at 471.406 kb on + strand, within OH686_02190 at 471.406 kb on + strand, within OH686_02190 at 471.406 kb on + strand, within OH686_02190 at 471.406 kb on + strand, within OH686_02190 at 471.407 kb on - strand, within OH686_02190 at 471.410 kb on + strand, within OH686_02190 at 471.601 kb on + strand, within OH686_02190 at 471.602 kb on - strand, within OH686_02190 at 471.604 kb on + strand, within OH686_02190 at 471.715 kb on + strand, within OH686_02190 at 471.831 kb on + strand, within OH686_02190 at 471.831 kb on + strand, within OH686_02190 at 471.832 kb on - strand, within OH686_02190 at 471.832 kb on - strand, within OH686_02190 at 471.947 kb on - strand, within OH686_02190 at 472.022 kb on - strand, within OH686_02190 at 472.118 kb on - strand, within OH686_02190 at 472.118 kb on - strand, within OH686_02190 at 472.292 kb on - strand at 472.292 kb on - strand at 472.333 kb on + strand at 472.333 kb on + strand at 472.333 kb on + strand at 472.333 kb on + strand at 472.333 kb on + strand at 472.333 kb on + strand at 472.334 kb on - strand at 472.557 kb on + strand, within OH686_02195 at 472.557 kb on + strand, within OH686_02195 at 472.557 kb on + strand, within OH686_02195 at 472.557 kb on + strand, within OH686_02195 at 472.558 kb on - strand, within OH686_02195 at 472.756 kb on - strand, within OH686_02195 at 472.756 kb on - strand, within OH686_02195 at 472.879 kb on - strand, within OH686_02195 at 472.973 kb on + strand at 472.974 kb on - strand at 472.974 kb on - strand at 473.174 kb on + strand at 473.174 kb on + strand at 473.198 kb on - strand at 473.201 kb on + strand at 473.201 kb on + strand at 473.239 kb on - strand at 473.239 kb on - strand at 473.544 kb on - strand, within OH686_02205 at 473.678 kb on + strand, within OH686_02205 at 473.825 kb on + strand, within OH686_02205
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 471,406 + OH686_02190 0.33 -0.2 471,406 + OH686_02190 0.33 -0.3 471,406 + OH686_02190 0.33 -1.0 471,406 + OH686_02190 0.33 -0.2 471,406 + OH686_02190 0.33 -0.6 471,406 + OH686_02190 0.33 -0.6 471,406 + OH686_02190 0.33 +0.7 471,406 + OH686_02190 0.33 -1.4 471,407 - OH686_02190 0.33 -0.3 471,410 + OH686_02190 0.33 -1.9 471,601 + OH686_02190 0.46 -0.6 471,602 - OH686_02190 0.46 +0.0 471,604 + OH686_02190 0.47 +1.3 471,715 + OH686_02190 0.54 -0.6 471,831 + OH686_02190 0.62 -1.0 471,831 + OH686_02190 0.62 +0.0 471,832 - OH686_02190 0.62 -0.8 471,832 - OH686_02190 0.62 +0.0 471,947 - OH686_02190 0.70 +0.0 472,022 - OH686_02190 0.76 +0.0 472,118 - OH686_02190 0.82 +0.0 472,118 - OH686_02190 0.82 -1.2 472,292 - -0.3 472,292 - -1.0 472,333 + -0.6 472,333 + -1.0 472,333 + -1.0 472,333 + -0.2 472,333 + -0.3 472,333 + +1.3 472,334 - +1.7 472,557 + OH686_02195 0.30 +0.0 472,557 + OH686_02195 0.30 -0.3 472,557 + OH686_02195 0.30 -0.3 472,557 + OH686_02195 0.30 +0.0 472,558 - OH686_02195 0.30 -0.3 472,756 - OH686_02195 0.62 -0.6 472,756 - OH686_02195 0.62 +0.0 472,879 - OH686_02195 0.82 -0.8 472,973 + -0.2 472,974 - +0.0 472,974 - +0.7 473,174 + +2.3 473,174 + +0.6 473,198 - +0.7 473,201 + +0.7 473,201 + -0.6 473,239 - -0.8 473,239 - +0.7 473,544 - OH686_02205 0.37 -0.3 473,678 + OH686_02205 0.51 -0.3 473,825 + OH686_02205 0.66 -0.3
Or see this region's nucleotide sequence