Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03605 and PS417_03610 are separated by 0 nucleotides PS417_03610 and PS417_03615 overlap by 7 nucleotides PS417_03615 and PS417_03620 overlap by 8 nucleotides PS417_03620 and PS417_03625 are separated by 112 nucleotides
PS417_03605: PS417_03605 - peptide chain release factor 1, at 820,025 to 821,107
_03605
PS417_03610: PS417_03610 - SAM-dependent methyltransferase, at 821,108 to 821,938
_03610
PS417_03615: PS417_03615 - molybdopterin-synthase adenylyltransferase, at 821,932 to 822,687
_03615
PS417_03620: PS417_03620 - glutamate racemase, at 822,680 to 823,474
_03620
PS417_03625: PS417_03625 - lipid A 3-O-deacylase, at 823,587 to 824,105
_03625
Position (kb) 821
822
823 Strain fitness (log2 ratio) -2
-1
0
1 at 821.105 kb on + strand at 821.105 kb on + strand at 822.456 kb on - strand, within PS417_03615 at 823.435 kb on - strand at 823.531 kb on + strand at 823.531 kb on + strand at 823.532 kb on - strand at 823.532 kb on - strand at 823.541 kb on + strand at 823.549 kb on - strand at 823.549 kb on - strand at 823.560 kb on + strand at 823.560 kb on + strand at 823.560 kb on + strand at 823.560 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 821,105 + -0.4 821,105 + +0.9 822,456 - PS417_03615 0.69 -2.6 823,435 - +0.2 823,531 + -0.4 823,531 + -0.1 823,532 - +0.3 823,532 - -0.7 823,541 + -0.3 823,549 - +0.5 823,549 - +0.2 823,560 + -0.9 823,560 + -1.9 823,560 + +0.1 823,560 + +0.5
Or see this region's nucleotide sequence