Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22095 and PS417_22100 are separated by 93 nucleotides PS417_22100 and PS417_22105 are separated by 17 nucleotides PS417_22105 and PS417_22110 overlap by 14 nucleotides
PS417_22095: PS417_22095 - class V aminotransferase, at 4,786,756 to 4,787,931
_22095
PS417_22100: PS417_22100 - keto-deoxy-phosphogluconate aldolase, at 4,788,025 to 4,788,690
_22100
PS417_22105: PS417_22105 - 6-phosphogluconolactonase, at 4,788,708 to 4,789,421
_22105
PS417_22110: PS417_22110 - glucose-6-phosphate dehydrogenase, at 4,789,408 to 4,790,874
_22110
Position (kb)
4788
4789 Strain fitness (log2 ratio)
-2
-1
0
1 at 4787.059 kb on + strand, within PS417_22095 at 4787.060 kb on - strand, within PS417_22095 at 4787.060 kb on - strand, within PS417_22095 at 4787.088 kb on - strand, within PS417_22095 at 4787.215 kb on + strand, within PS417_22095 at 4787.343 kb on - strand, within PS417_22095 at 4787.343 kb on - strand, within PS417_22095 at 4787.464 kb on + strand, within PS417_22095 at 4787.545 kb on - strand, within PS417_22095 at 4787.545 kb on - strand, within PS417_22095 at 4787.545 kb on - strand, within PS417_22095 at 4787.545 kb on - strand, within PS417_22095 at 4787.545 kb on - strand, within PS417_22095 at 4787.651 kb on - strand, within PS417_22095 at 4787.651 kb on - strand, within PS417_22095 at 4787.669 kb on + strand, within PS417_22095 at 4787.729 kb on - strand, within PS417_22095 at 4787.930 kb on - strand at 4787.930 kb on - strand at 4787.961 kb on - strand at 4788.015 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 4,787,059 + PS417_22095 0.26 -0.8 4,787,060 - PS417_22095 0.26 -1.8 4,787,060 - PS417_22095 0.26 -0.8 4,787,088 - PS417_22095 0.28 +0.0 4,787,215 + PS417_22095 0.39 +0.3 4,787,343 - PS417_22095 0.50 -1.8 4,787,343 - PS417_22095 0.50 +0.0 4,787,464 + PS417_22095 0.60 -0.2 4,787,545 - PS417_22095 0.67 -1.8 4,787,545 - PS417_22095 0.67 -0.2 4,787,545 - PS417_22095 0.67 -0.7 4,787,545 - PS417_22095 0.67 -1.2 4,787,545 - PS417_22095 0.67 +0.3 4,787,651 - PS417_22095 0.76 -0.2 4,787,651 - PS417_22095 0.76 +1.2 4,787,669 + PS417_22095 0.78 +0.5 4,787,729 - PS417_22095 0.83 -0.3 4,787,930 - +0.7 4,787,930 - +0.2 4,787,961 - +0.0 4,788,015 + -0.0
Or see this region's nucleotide sequence