Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4669 and Echvi_4670 are separated by 185 nucleotides Echvi_4670 and Echvi_4671 are separated by 228 nucleotides
Echvi_4669: Echvi_4669 - ATP-dependent protease HslVU, ATPase subunit, at 5,587,606 to 5,589,012
_4669
Echvi_4670: Echvi_4670 - ATP-dependent protease La, at 5,589,198 to 5,591,681
_4670
Echvi_4671: Echvi_4671 - RIP metalloprotease RseP, at 5,591,910 to 5,593,229
_4671
Position (kb)
5589
5590
5591
5592 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5588.343 kb on + strand, within Echvi_4669 at 5588.343 kb on + strand, within Echvi_4669 at 5588.344 kb on - strand, within Echvi_4669 at 5588.541 kb on + strand, within Echvi_4669 at 5588.541 kb on + strand, within Echvi_4669 at 5588.541 kb on + strand, within Echvi_4669 at 5588.542 kb on - strand, within Echvi_4669 at 5588.542 kb on - strand, within Echvi_4669 at 5588.556 kb on + strand, within Echvi_4669 at 5588.557 kb on - strand, within Echvi_4669 at 5588.604 kb on + strand, within Echvi_4669 at 5588.733 kb on - strand, within Echvi_4669 at 5588.733 kb on - strand, within Echvi_4669 at 5588.733 kb on - strand, within Echvi_4669 at 5588.733 kb on - strand, within Echvi_4669 at 5588.738 kb on - strand, within Echvi_4669 at 5588.769 kb on + strand, within Echvi_4669 at 5588.950 kb on + strand at 5588.950 kb on + strand at 5588.951 kb on - strand at 5588.951 kb on - strand at 5588.953 kb on - strand at 5588.955 kb on + strand at 5588.955 kb on + strand at 5588.955 kb on + strand at 5588.956 kb on - strand at 5588.957 kb on + strand at 5588.957 kb on + strand at 5588.957 kb on + strand at 5588.958 kb on - strand at 5588.958 kb on - strand at 5588.958 kb on - strand at 5588.958 kb on - strand at 5589.000 kb on + strand at 5589.012 kb on + strand at 5589.073 kb on + strand at 5589.074 kb on - strand at 5589.092 kb on + strand at 5589.380 kb on + strand at 5589.424 kb on - strand at 5589.442 kb on - strand at 5589.458 kb on + strand, within Echvi_4670 at 5589.459 kb on - strand, within Echvi_4670 at 5589.489 kb on + strand, within Echvi_4670 at 5589.596 kb on - strand, within Echvi_4670 at 5589.645 kb on + strand, within Echvi_4670 at 5589.645 kb on + strand, within Echvi_4670 at 5589.646 kb on - strand, within Echvi_4670 at 5589.650 kb on - strand, within Echvi_4670 at 5589.713 kb on + strand, within Echvi_4670 at 5589.971 kb on + strand, within Echvi_4670 at 5589.973 kb on + strand, within Echvi_4670 at 5589.973 kb on + strand, within Echvi_4670 at 5589.973 kb on + strand, within Echvi_4670 at 5589.973 kb on + strand, within Echvi_4670 at 5589.981 kb on + strand, within Echvi_4670 at 5590.097 kb on + strand, within Echvi_4670 at 5590.097 kb on + strand, within Echvi_4670 at 5590.098 kb on - strand, within Echvi_4670 at 5590.198 kb on + strand, within Echvi_4670 at 5590.198 kb on + strand, within Echvi_4670 at 5590.199 kb on - strand, within Echvi_4670 at 5590.199 kb on - strand, within Echvi_4670 at 5590.199 kb on - strand, within Echvi_4670 at 5590.213 kb on + strand, within Echvi_4670 at 5590.213 kb on + strand, within Echvi_4670 at 5590.213 kb on + strand, within Echvi_4670 at 5590.214 kb on - strand, within Echvi_4670 at 5590.321 kb on + strand, within Echvi_4670 at 5590.322 kb on - strand, within Echvi_4670 at 5590.387 kb on + strand, within Echvi_4670 at 5590.388 kb on - strand, within Echvi_4670 at 5590.388 kb on - strand, within Echvi_4670 at 5590.388 kb on - strand, within Echvi_4670 at 5590.450 kb on + strand, within Echvi_4670 at 5590.516 kb on + strand, within Echvi_4670 at 5590.570 kb on + strand, within Echvi_4670 at 5590.571 kb on - strand, within Echvi_4670 at 5590.699 kb on + strand, within Echvi_4670 at 5590.699 kb on + strand, within Echvi_4670 at 5590.717 kb on + strand, within Echvi_4670 at 5590.779 kb on + strand, within Echvi_4670 at 5590.780 kb on - strand, within Echvi_4670 at 5590.979 kb on + strand, within Echvi_4670 at 5590.979 kb on + strand, within Echvi_4670 at 5590.979 kb on + strand, within Echvi_4670 at 5590.980 kb on - strand, within Echvi_4670 at 5590.980 kb on - strand, within Echvi_4670 at 5590.981 kb on + strand, within Echvi_4670 at 5590.981 kb on + strand, within Echvi_4670 at 5590.982 kb on - strand, within Echvi_4670 at 5591.047 kb on - strand, within Echvi_4670 at 5591.102 kb on + strand, within Echvi_4670 at 5591.103 kb on - strand, within Echvi_4670 at 5591.146 kb on - strand, within Echvi_4670 at 5591.146 kb on - strand, within Echvi_4670 at 5591.233 kb on + strand, within Echvi_4670 at 5591.234 kb on - strand, within Echvi_4670 at 5591.234 kb on - strand, within Echvi_4670 at 5591.309 kb on + strand, within Echvi_4670 at 5591.315 kb on + strand, within Echvi_4670 at 5591.316 kb on - strand, within Echvi_4670 at 5591.318 kb on + strand, within Echvi_4670 at 5591.319 kb on - strand, within Echvi_4670 at 5591.319 kb on - strand, within Echvi_4670 at 5591.319 kb on - strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.374 kb on + strand, within Echvi_4670 at 5591.375 kb on - strand, within Echvi_4670 at 5591.378 kb on + strand, within Echvi_4670 at 5591.379 kb on - strand, within Echvi_4670 at 5591.379 kb on - strand, within Echvi_4670 at 5591.549 kb on + strand at 5591.550 kb on - strand at 5591.611 kb on - strand at 5591.656 kb on + strand at 5591.657 kb on - strand at 5591.657 kb on - strand at 5591.659 kb on - strand at 5591.659 kb on - strand at 5591.659 kb on - strand at 5591.659 kb on - strand at 5591.683 kb on + strand at 5591.684 kb on - strand at 5591.684 kb on - strand at 5591.684 kb on - strand at 5591.685 kb on + strand at 5591.686 kb on - strand at 5591.686 kb on - strand at 5591.709 kb on + strand at 5591.725 kb on - strand at 5591.727 kb on - strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.755 kb on + strand at 5591.828 kb on + strand at 5591.890 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 5,588,343 + Echvi_4669 0.52 -1.2 5,588,343 + Echvi_4669 0.52 -0.7 5,588,344 - Echvi_4669 0.52 -0.6 5,588,541 + Echvi_4669 0.66 -0.3 5,588,541 + Echvi_4669 0.66 -0.3 5,588,541 + Echvi_4669 0.66 -0.4 5,588,542 - Echvi_4669 0.67 +0.7 5,588,542 - Echvi_4669 0.67 -1.0 5,588,556 + Echvi_4669 0.68 +0.5 5,588,557 - Echvi_4669 0.68 +0.3 5,588,604 + Echvi_4669 0.71 -0.2 5,588,733 - Echvi_4669 0.80 -1.3 5,588,733 - Echvi_4669 0.80 +1.0 5,588,733 - Echvi_4669 0.80 +0.2 5,588,733 - Echvi_4669 0.80 +0.6 5,588,738 - Echvi_4669 0.80 +0.6 5,588,769 + Echvi_4669 0.83 +0.3 5,588,950 + -0.4 5,588,950 + +2.2 5,588,951 - +0.3 5,588,951 - +0.1 5,588,953 - -0.4 5,588,955 + +1.5 5,588,955 + -0.9 5,588,955 + -0.3 5,588,956 - -0.9 5,588,957 + +2.1 5,588,957 + -1.4 5,588,957 + -0.3 5,588,958 - -0.1 5,588,958 - +0.2 5,588,958 - -0.1 5,588,958 - +0.3 5,589,000 + +0.3 5,589,012 + -0.6 5,589,073 + -0.2 5,589,074 - +2.0 5,589,092 + +0.6 5,589,380 + +0.6 5,589,424 - +0.4 5,589,442 - +0.5 5,589,458 + Echvi_4670 0.10 -2.4 5,589,459 - Echvi_4670 0.11 +0.1 5,589,489 + Echvi_4670 0.12 +1.4 5,589,596 - Echvi_4670 0.16 -0.6 5,589,645 + Echvi_4670 0.18 +0.9 5,589,645 + Echvi_4670 0.18 -0.1 5,589,646 - Echvi_4670 0.18 +1.0 5,589,650 - Echvi_4670 0.18 -0.8 5,589,713 + Echvi_4670 0.21 +0.5 5,589,971 + Echvi_4670 0.31 +1.5 5,589,973 + Echvi_4670 0.31 +0.5 5,589,973 + Echvi_4670 0.31 +1.7 5,589,973 + Echvi_4670 0.31 +1.8 5,589,973 + Echvi_4670 0.31 -0.6 5,589,981 + Echvi_4670 0.32 +1.3 5,590,097 + Echvi_4670 0.36 +0.5 5,590,097 + Echvi_4670 0.36 +0.4 5,590,098 - Echvi_4670 0.36 +0.1 5,590,198 + Echvi_4670 0.40 +0.5 5,590,198 + Echvi_4670 0.40 -1.7 5,590,199 - Echvi_4670 0.40 +1.5 5,590,199 - Echvi_4670 0.40 +0.5 5,590,199 - Echvi_4670 0.40 +0.5 5,590,213 + Echvi_4670 0.41 -0.8 5,590,213 + Echvi_4670 0.41 +1.9 5,590,213 + Echvi_4670 0.41 +2.5 5,590,214 - Echvi_4670 0.41 +1.7 5,590,321 + Echvi_4670 0.45 +0.5 5,590,322 - Echvi_4670 0.45 +1.1 5,590,387 + Echvi_4670 0.48 +0.4 5,590,388 - Echvi_4670 0.48 +1.0 5,590,388 - Echvi_4670 0.48 +0.2 5,590,388 - Echvi_4670 0.48 +0.7 5,590,450 + Echvi_4670 0.50 +0.4 5,590,516 + Echvi_4670 0.53 -0.0 5,590,570 + Echvi_4670 0.55 +0.8 5,590,571 - Echvi_4670 0.55 +0.0 5,590,699 + Echvi_4670 0.60 +0.7 5,590,699 + Echvi_4670 0.60 +1.4 5,590,717 + Echvi_4670 0.61 +0.8 5,590,779 + Echvi_4670 0.64 +1.7 5,590,780 - Echvi_4670 0.64 +1.5 5,590,979 + Echvi_4670 0.72 -0.2 5,590,979 + Echvi_4670 0.72 +1.1 5,590,979 + Echvi_4670 0.72 +0.6 5,590,980 - Echvi_4670 0.72 -0.4 5,590,980 - Echvi_4670 0.72 +0.8 5,590,981 + Echvi_4670 0.72 +0.8 5,590,981 + Echvi_4670 0.72 +0.9 5,590,982 - Echvi_4670 0.72 -0.5 5,591,047 - Echvi_4670 0.74 +0.1 5,591,102 + Echvi_4670 0.77 +2.2 5,591,103 - Echvi_4670 0.77 +0.5 5,591,146 - Echvi_4670 0.78 +1.5 5,591,146 - Echvi_4670 0.78 +0.4 5,591,233 + Echvi_4670 0.82 +2.5 5,591,234 - Echvi_4670 0.82 +0.4 5,591,234 - Echvi_4670 0.82 +0.2 5,591,309 + Echvi_4670 0.85 +1.0 5,591,315 + Echvi_4670 0.85 +0.4 5,591,316 - Echvi_4670 0.85 +0.4 5,591,318 + Echvi_4670 0.85 +0.2 5,591,319 - Echvi_4670 0.85 +0.9 5,591,319 - Echvi_4670 0.85 -1.3 5,591,319 - Echvi_4670 0.85 +0.1 5,591,374 + Echvi_4670 0.88 +1.3 5,591,374 + Echvi_4670 0.88 +1.7 5,591,374 + Echvi_4670 0.88 +1.1 5,591,374 + Echvi_4670 0.88 -1.1 5,591,374 + Echvi_4670 0.88 -2.4 5,591,374 + Echvi_4670 0.88 +1.2 5,591,374 + Echvi_4670 0.88 -0.2 5,591,375 - Echvi_4670 0.88 +1.3 5,591,378 + Echvi_4670 0.88 +2.5 5,591,379 - Echvi_4670 0.88 +0.9 5,591,379 - Echvi_4670 0.88 +0.5 5,591,549 + +0.6 5,591,550 - -0.0 5,591,611 - +2.0 5,591,656 + +0.8 5,591,657 - +0.6 5,591,657 - +0.4 5,591,659 - +0.1 5,591,659 - +0.4 5,591,659 - +0.4 5,591,659 - +0.5 5,591,683 + +1.8 5,591,684 - +0.1 5,591,684 - +0.4 5,591,684 - +0.2 5,591,685 + +1.3 5,591,686 - -0.3 5,591,686 - -0.3 5,591,709 + +0.1 5,591,725 - +1.0 5,591,727 - -2.9 5,591,755 + +0.9 5,591,755 + +1.6 5,591,755 + +0.6 5,591,755 + +0.3 5,591,755 + +1.6 5,591,755 + +0.3 5,591,755 + +0.9 5,591,755 + +0.8 5,591,828 + -0.1 5,591,890 - -2.0
Or see this region's nucleotide sequence