Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4624

Experiment: m.b. Cisplatin 0.05 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_4624 and Echvi_4625 are separated by 95 nucleotides Echvi_4624: Echvi_4624 - 5S, at 5,532,453 to 5,532,564 _4624 Echvi_4625: Echvi_4625 - 23S, at 5,532,660 to 5,535,553 _4625 Position (kb) 5532 5533Strain fitness (log2 ratio) -2 -1 0 1at 5531.523 kb on - strandat 5531.573 kb on + strandat 5531.574 kb on - strandat 5531.814 kb on - strandat 5531.899 kb on + strandat 5531.899 kb on + strandat 5532.088 kb on - strandat 5532.612 kb on - strandat 5532.612 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml
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5,531,523 - -0.0
5,531,573 + +0.6
5,531,574 - +0.4
5,531,814 - +0.8
5,531,899 + -0.9
5,531,899 + +0.0
5,532,088 - -1.2
5,532,612 - -0.4
5,532,612 - -2.0

Or see this region's nucleotide sequence