Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3631 and Echvi_3632 are separated by 374 nucleotides Echvi_3632 and Echvi_3633 are separated by 377 nucleotides
Echvi_3631: Echvi_3631 - Sugar kinases, ribokinase family, at 4,310,740 to 4,311,735
_3631
Echvi_3632: Echvi_3632 - Altronate dehydratase, at 4,312,110 to 4,313,756
_3632
Echvi_3633: Echvi_3633 - Domain of Unknown Function (DUF1080)., at 4,314,134 to 4,315,519
_3633
Position (kb)
4312
4313
4314 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4311.123 kb on + strand, within Echvi_3631 at 4311.123 kb on + strand, within Echvi_3631 at 4311.141 kb on + strand, within Echvi_3631 at 4311.297 kb on + strand, within Echvi_3631 at 4311.325 kb on - strand, within Echvi_3631 at 4311.327 kb on + strand, within Echvi_3631 at 4311.425 kb on - strand, within Echvi_3631 at 4311.426 kb on + strand, within Echvi_3631 at 4311.426 kb on + strand, within Echvi_3631 at 4311.500 kb on + strand, within Echvi_3631 at 4311.500 kb on + strand, within Echvi_3631 at 4311.500 kb on + strand, within Echvi_3631 at 4311.500 kb on + strand, within Echvi_3631 at 4311.500 kb on + strand, within Echvi_3631 at 4311.500 kb on + strand, within Echvi_3631 at 4311.501 kb on - strand, within Echvi_3631 at 4311.501 kb on - strand, within Echvi_3631 at 4311.526 kb on + strand, within Echvi_3631 at 4311.526 kb on + strand, within Echvi_3631 at 4311.531 kb on - strand, within Echvi_3631 at 4311.550 kb on + strand, within Echvi_3631 at 4311.558 kb on + strand, within Echvi_3631 at 4311.559 kb on - strand, within Echvi_3631 at 4311.616 kb on + strand, within Echvi_3631 at 4311.617 kb on - strand, within Echvi_3631 at 4311.617 kb on - strand, within Echvi_3631 at 4311.645 kb on + strand at 4311.649 kb on - strand at 4311.649 kb on - strand at 4311.649 kb on - strand at 4311.649 kb on - strand at 4311.649 kb on - strand at 4311.649 kb on - strand at 4311.650 kb on + strand at 4311.650 kb on + strand at 4311.651 kb on - strand at 4311.651 kb on - strand at 4311.717 kb on + strand at 4311.717 kb on + strand at 4311.717 kb on + strand at 4311.718 kb on - strand at 4311.737 kb on + strand at 4311.788 kb on - strand at 4311.788 kb on - strand at 4311.859 kb on - strand at 4311.866 kb on + strand at 4311.866 kb on + strand at 4311.886 kb on + strand at 4311.887 kb on - strand at 4312.095 kb on + strand at 4312.118 kb on + strand at 4312.145 kb on + strand at 4312.162 kb on + strand at 4312.162 kb on + strand at 4312.163 kb on - strand at 4312.242 kb on - strand at 4312.281 kb on + strand, within Echvi_3632 at 4312.281 kb on + strand, within Echvi_3632 at 4312.281 kb on + strand, within Echvi_3632 at 4312.281 kb on + strand, within Echvi_3632 at 4312.281 kb on + strand, within Echvi_3632 at 4312.282 kb on - strand, within Echvi_3632 at 4312.282 kb on - strand, within Echvi_3632 at 4312.282 kb on - strand, within Echvi_3632 at 4312.282 kb on - strand, within Echvi_3632 at 4312.282 kb on - strand, within Echvi_3632 at 4312.282 kb on - strand, within Echvi_3632 at 4312.282 kb on - strand, within Echvi_3632 at 4312.282 kb on - strand, within Echvi_3632 at 4312.283 kb on + strand, within Echvi_3632 at 4312.283 kb on + strand, within Echvi_3632 at 4312.283 kb on + strand, within Echvi_3632 at 4312.283 kb on + strand, within Echvi_3632 at 4312.283 kb on + strand, within Echvi_3632 at 4312.284 kb on - strand, within Echvi_3632 at 4312.284 kb on - strand, within Echvi_3632 at 4312.284 kb on - strand, within Echvi_3632 at 4312.284 kb on - strand, within Echvi_3632 at 4312.287 kb on + strand, within Echvi_3632 at 4312.287 kb on + strand, within Echvi_3632 at 4312.287 kb on + strand, within Echvi_3632 at 4312.288 kb on - strand, within Echvi_3632 at 4312.326 kb on - strand, within Echvi_3632 at 4312.336 kb on + strand, within Echvi_3632 at 4312.337 kb on - strand, within Echvi_3632 at 4312.337 kb on - strand, within Echvi_3632 at 4312.337 kb on - strand, within Echvi_3632 at 4312.417 kb on + strand, within Echvi_3632 at 4312.418 kb on - strand, within Echvi_3632 at 4312.418 kb on - strand, within Echvi_3632 at 4312.418 kb on - strand, within Echvi_3632 at 4312.418 kb on - strand, within Echvi_3632 at 4312.472 kb on - strand, within Echvi_3632 at 4312.496 kb on + strand, within Echvi_3632 at 4312.497 kb on - strand, within Echvi_3632 at 4312.498 kb on + strand, within Echvi_3632 at 4312.499 kb on - strand, within Echvi_3632 at 4312.552 kb on + strand, within Echvi_3632 at 4312.618 kb on - strand, within Echvi_3632 at 4312.694 kb on + strand, within Echvi_3632 at 4312.694 kb on + strand, within Echvi_3632 at 4312.695 kb on - strand, within Echvi_3632 at 4312.702 kb on + strand, within Echvi_3632 at 4312.702 kb on + strand, within Echvi_3632 at 4312.793 kb on + strand, within Echvi_3632 at 4312.794 kb on - strand, within Echvi_3632 at 4312.827 kb on - strand, within Echvi_3632 at 4312.911 kb on - strand, within Echvi_3632 at 4313.039 kb on - strand, within Echvi_3632 at 4313.241 kb on + strand, within Echvi_3632 at 4313.264 kb on - strand, within Echvi_3632 at 4313.264 kb on - strand, within Echvi_3632 at 4313.304 kb on - strand, within Echvi_3632 at 4313.361 kb on - strand, within Echvi_3632 at 4313.374 kb on + strand, within Echvi_3632 at 4313.374 kb on + strand, within Echvi_3632 at 4313.375 kb on - strand, within Echvi_3632 at 4313.375 kb on - strand, within Echvi_3632 at 4313.389 kb on - strand, within Echvi_3632 at 4313.397 kb on + strand, within Echvi_3632 at 4313.397 kb on + strand, within Echvi_3632 at 4313.398 kb on - strand, within Echvi_3632 at 4313.398 kb on - strand, within Echvi_3632 at 4313.398 kb on - strand, within Echvi_3632 at 4313.418 kb on - strand, within Echvi_3632 at 4313.422 kb on + strand, within Echvi_3632 at 4313.422 kb on + strand, within Echvi_3632 at 4313.425 kb on + strand, within Echvi_3632 at 4313.425 kb on + strand, within Echvi_3632 at 4313.426 kb on - strand, within Echvi_3632 at 4313.426 kb on - strand, within Echvi_3632 at 4313.426 kb on - strand, within Echvi_3632 at 4313.429 kb on + strand, within Echvi_3632 at 4313.429 kb on + strand, within Echvi_3632 at 4313.429 kb on + strand, within Echvi_3632 at 4313.429 kb on + strand, within Echvi_3632 at 4313.430 kb on - strand, within Echvi_3632 at 4313.430 kb on - strand, within Echvi_3632 at 4313.463 kb on - strand, within Echvi_3632 at 4313.463 kb on - strand, within Echvi_3632 at 4313.463 kb on - strand, within Echvi_3632 at 4313.463 kb on - strand, within Echvi_3632 at 4313.561 kb on + strand, within Echvi_3632 at 4313.562 kb on - strand, within Echvi_3632 at 4313.585 kb on + strand, within Echvi_3632 at 4313.595 kb on - strand at 4313.711 kb on - strand at 4313.759 kb on - strand at 4313.771 kb on + strand at 4313.800 kb on - strand at 4313.801 kb on + strand at 4313.801 kb on + strand at 4313.801 kb on + strand at 4313.802 kb on - strand at 4313.890 kb on + strand at 4313.890 kb on + strand at 4313.894 kb on + strand at 4313.963 kb on - strand at 4313.968 kb on - strand at 4313.968 kb on - strand at 4313.975 kb on - strand at 4313.979 kb on - strand at 4314.060 kb on + strand at 4314.061 kb on - strand at 4314.065 kb on - strand at 4314.069 kb on + strand at 4314.102 kb on - strand at 4314.138 kb on - strand at 4314.140 kb on - strand at 4314.214 kb on + strand at 4314.214 kb on + strand at 4314.214 kb on + strand at 4314.303 kb on + strand, within Echvi_3633 at 4314.303 kb on + strand, within Echvi_3633 at 4314.336 kb on + strand, within Echvi_3633 at 4314.337 kb on - strand, within Echvi_3633 at 4314.337 kb on - strand, within Echvi_3633 at 4314.452 kb on + strand, within Echvi_3633 at 4314.452 kb on + strand, within Echvi_3633 at 4314.452 kb on + strand, within Echvi_3633 at 4314.453 kb on - strand, within Echvi_3633 at 4314.453 kb on - strand, within Echvi_3633 at 4314.453 kb on - strand, within Echvi_3633 at 4314.453 kb on - strand, within Echvi_3633 at 4314.453 kb on - strand, within Echvi_3633 at 4314.530 kb on + strand, within Echvi_3633 at 4314.530 kb on + strand, within Echvi_3633 at 4314.530 kb on + strand, within Echvi_3633 at 4314.530 kb on + strand, within Echvi_3633 at 4314.531 kb on - strand, within Echvi_3633 at 4314.531 kb on - strand, within Echvi_3633 at 4314.531 kb on - strand, within Echvi_3633 at 4314.531 kb on - strand, within Echvi_3633 at 4314.531 kb on - strand, within Echvi_3633 at 4314.531 kb on - strand, within Echvi_3633 at 4314.570 kb on + strand, within Echvi_3633 at 4314.571 kb on - strand, within Echvi_3633 at 4314.608 kb on + strand, within Echvi_3633 at 4314.608 kb on + strand, within Echvi_3633 at 4314.608 kb on + strand, within Echvi_3633 at 4314.609 kb on - strand, within Echvi_3633 at 4314.609 kb on - strand, within Echvi_3633 at 4314.672 kb on + strand, within Echvi_3633 at 4314.678 kb on - strand, within Echvi_3633 at 4314.678 kb on - strand, within Echvi_3633 at 4314.710 kb on - strand, within Echvi_3633 at 4314.728 kb on - strand, within Echvi_3633
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 4,311,123 + Echvi_3631 0.38 -0.3 4,311,123 + Echvi_3631 0.38 -1.0 4,311,141 + Echvi_3631 0.40 +0.9 4,311,297 + Echvi_3631 0.56 -0.4 4,311,325 - Echvi_3631 0.59 -0.6 4,311,327 + Echvi_3631 0.59 -0.0 4,311,425 - Echvi_3631 0.69 +0.1 4,311,426 + Echvi_3631 0.69 -0.0 4,311,426 + Echvi_3631 0.69 +0.2 4,311,500 + Echvi_3631 0.76 +0.5 4,311,500 + Echvi_3631 0.76 +1.0 4,311,500 + Echvi_3631 0.76 -0.1 4,311,500 + Echvi_3631 0.76 +0.2 4,311,500 + Echvi_3631 0.76 -0.6 4,311,500 + Echvi_3631 0.76 +0.1 4,311,501 - Echvi_3631 0.76 +0.2 4,311,501 - Echvi_3631 0.76 +0.7 4,311,526 + Echvi_3631 0.79 +0.1 4,311,526 + Echvi_3631 0.79 +1.3 4,311,531 - Echvi_3631 0.79 +0.1 4,311,550 + Echvi_3631 0.81 -0.0 4,311,558 + Echvi_3631 0.82 -0.7 4,311,559 - Echvi_3631 0.82 +0.9 4,311,616 + Echvi_3631 0.88 -0.0 4,311,617 - Echvi_3631 0.88 -1.9 4,311,617 - Echvi_3631 0.88 -1.0 4,311,645 + -0.1 4,311,649 - -0.4 4,311,649 - +0.8 4,311,649 - +0.2 4,311,649 - +0.3 4,311,649 - +0.9 4,311,649 - +0.3 4,311,650 + -0.2 4,311,650 + -1.3 4,311,651 - +1.9 4,311,651 - -1.7 4,311,717 + -0.5 4,311,717 + -1.2 4,311,717 + +0.4 4,311,718 - -0.7 4,311,737 + +0.7 4,311,788 - -1.4 4,311,788 - -0.2 4,311,859 - +0.3 4,311,866 + +0.3 4,311,866 + +0.8 4,311,886 + +0.3 4,311,887 - -1.1 4,312,095 + -0.4 4,312,118 + -1.7 4,312,145 + +1.1 4,312,162 + +0.3 4,312,162 + -0.2 4,312,163 - -0.1 4,312,242 - +0.7 4,312,281 + Echvi_3632 0.10 -1.5 4,312,281 + Echvi_3632 0.10 -0.1 4,312,281 + Echvi_3632 0.10 +0.1 4,312,281 + Echvi_3632 0.10 -0.3 4,312,281 + Echvi_3632 0.10 +1.8 4,312,282 - Echvi_3632 0.10 +0.7 4,312,282 - Echvi_3632 0.10 -0.4 4,312,282 - Echvi_3632 0.10 -0.3 4,312,282 - Echvi_3632 0.10 +0.0 4,312,282 - Echvi_3632 0.10 -0.0 4,312,282 - Echvi_3632 0.10 +0.4 4,312,282 - Echvi_3632 0.10 -0.8 4,312,282 - Echvi_3632 0.10 +0.5 4,312,283 + Echvi_3632 0.11 -1.7 4,312,283 + Echvi_3632 0.11 -1.1 4,312,283 + Echvi_3632 0.11 +0.8 4,312,283 + Echvi_3632 0.11 -1.8 4,312,283 + Echvi_3632 0.11 -0.5 4,312,284 - Echvi_3632 0.11 +0.2 4,312,284 - Echvi_3632 0.11 +0.2 4,312,284 - Echvi_3632 0.11 +0.0 4,312,284 - Echvi_3632 0.11 -2.8 4,312,287 + Echvi_3632 0.11 +1.0 4,312,287 + Echvi_3632 0.11 -0.4 4,312,287 + Echvi_3632 0.11 -0.3 4,312,288 - Echvi_3632 0.11 +0.5 4,312,326 - Echvi_3632 0.13 +0.6 4,312,336 + Echvi_3632 0.14 -0.0 4,312,337 - Echvi_3632 0.14 -1.4 4,312,337 - Echvi_3632 0.14 -1.0 4,312,337 - Echvi_3632 0.14 -0.1 4,312,417 + Echvi_3632 0.19 +0.3 4,312,418 - Echvi_3632 0.19 -1.5 4,312,418 - Echvi_3632 0.19 +0.6 4,312,418 - Echvi_3632 0.19 -0.5 4,312,418 - Echvi_3632 0.19 +0.3 4,312,472 - Echvi_3632 0.22 +0.2 4,312,496 + Echvi_3632 0.23 -0.5 4,312,497 - Echvi_3632 0.23 -1.4 4,312,498 + Echvi_3632 0.24 -0.5 4,312,499 - Echvi_3632 0.24 -0.7 4,312,552 + Echvi_3632 0.27 -0.7 4,312,618 - Echvi_3632 0.31 -0.1 4,312,694 + Echvi_3632 0.35 -0.0 4,312,694 + Echvi_3632 0.35 -1.1 4,312,695 - Echvi_3632 0.36 -0.1 4,312,702 + Echvi_3632 0.36 -0.2 4,312,702 + Echvi_3632 0.36 -0.5 4,312,793 + Echvi_3632 0.41 +0.2 4,312,794 - Echvi_3632 0.42 +0.5 4,312,827 - Echvi_3632 0.44 +0.3 4,312,911 - Echvi_3632 0.49 +0.1 4,313,039 - Echvi_3632 0.56 +1.1 4,313,241 + Echvi_3632 0.69 -0.4 4,313,264 - Echvi_3632 0.70 +0.2 4,313,264 - Echvi_3632 0.70 -2.0 4,313,304 - Echvi_3632 0.72 +0.6 4,313,361 - Echvi_3632 0.76 -0.1 4,313,374 + Echvi_3632 0.77 -0.6 4,313,374 + Echvi_3632 0.77 -0.3 4,313,375 - Echvi_3632 0.77 -0.1 4,313,375 - Echvi_3632 0.77 -0.6 4,313,389 - Echvi_3632 0.78 -0.1 4,313,397 + Echvi_3632 0.78 +0.2 4,313,397 + Echvi_3632 0.78 +0.2 4,313,398 - Echvi_3632 0.78 -0.3 4,313,398 - Echvi_3632 0.78 +0.1 4,313,398 - Echvi_3632 0.78 +0.3 4,313,418 - Echvi_3632 0.79 -0.2 4,313,422 + Echvi_3632 0.80 +1.7 4,313,422 + Echvi_3632 0.80 -1.4 4,313,425 + Echvi_3632 0.80 -0.2 4,313,425 + Echvi_3632 0.80 +0.2 4,313,426 - Echvi_3632 0.80 -0.3 4,313,426 - Echvi_3632 0.80 +0.1 4,313,426 - Echvi_3632 0.80 -0.5 4,313,429 + Echvi_3632 0.80 -0.4 4,313,429 + Echvi_3632 0.80 +0.2 4,313,429 + Echvi_3632 0.80 -2.3 4,313,429 + Echvi_3632 0.80 -0.2 4,313,430 - Echvi_3632 0.80 -0.4 4,313,430 - Echvi_3632 0.80 -0.2 4,313,463 - Echvi_3632 0.82 -0.1 4,313,463 - Echvi_3632 0.82 -0.4 4,313,463 - Echvi_3632 0.82 -0.9 4,313,463 - Echvi_3632 0.82 +0.2 4,313,561 + Echvi_3632 0.88 +0.1 4,313,562 - Echvi_3632 0.88 -0.6 4,313,585 + Echvi_3632 0.90 +0.0 4,313,595 - -0.4 4,313,711 - -1.6 4,313,759 - -0.3 4,313,771 + -1.9 4,313,800 - -1.3 4,313,801 + -0.5 4,313,801 + -0.8 4,313,801 + +1.5 4,313,802 - -1.3 4,313,890 + -0.1 4,313,890 + -0.5 4,313,894 + +0.7 4,313,963 - -1.3 4,313,968 - -0.9 4,313,968 - +0.4 4,313,975 - +0.5 4,313,979 - -0.3 4,314,060 + +0.8 4,314,061 - +0.4 4,314,065 - -0.3 4,314,069 + +0.6 4,314,102 - -0.3 4,314,138 - +1.1 4,314,140 - -0.3 4,314,214 + +0.0 4,314,214 + -2.3 4,314,214 + -0.3 4,314,303 + Echvi_3633 0.12 -0.5 4,314,303 + Echvi_3633 0.12 +1.3 4,314,336 + Echvi_3633 0.15 +0.7 4,314,337 - Echvi_3633 0.15 +0.7 4,314,337 - Echvi_3633 0.15 -0.9 4,314,452 + Echvi_3633 0.23 +0.9 4,314,452 + Echvi_3633 0.23 -0.3 4,314,452 + Echvi_3633 0.23 -1.0 4,314,453 - Echvi_3633 0.23 -0.5 4,314,453 - Echvi_3633 0.23 -0.2 4,314,453 - Echvi_3633 0.23 +0.3 4,314,453 - Echvi_3633 0.23 +0.3 4,314,453 - Echvi_3633 0.23 +0.7 4,314,530 + Echvi_3633 0.29 -0.7 4,314,530 + Echvi_3633 0.29 -1.0 4,314,530 + Echvi_3633 0.29 +0.5 4,314,530 + Echvi_3633 0.29 -0.6 4,314,531 - Echvi_3633 0.29 +0.4 4,314,531 - Echvi_3633 0.29 +0.1 4,314,531 - Echvi_3633 0.29 +1.3 4,314,531 - Echvi_3633 0.29 +0.1 4,314,531 - Echvi_3633 0.29 -0.1 4,314,531 - Echvi_3633 0.29 -0.9 4,314,570 + Echvi_3633 0.31 -1.1 4,314,571 - Echvi_3633 0.32 -1.0 4,314,608 + Echvi_3633 0.34 -0.3 4,314,608 + Echvi_3633 0.34 +0.1 4,314,608 + Echvi_3633 0.34 -0.5 4,314,609 - Echvi_3633 0.34 +0.4 4,314,609 - Echvi_3633 0.34 +0.4 4,314,672 + Echvi_3633 0.39 -0.7 4,314,678 - Echvi_3633 0.39 -0.0 4,314,678 - Echvi_3633 0.39 +0.4 4,314,710 - Echvi_3633 0.42 -0.3 4,314,728 - Echvi_3633 0.43 +0.7
Or see this region's nucleotide sequence