Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2089 and Echvi_2090 are separated by 122 nucleotides Echvi_2090 and Echvi_2091 are separated by 18 nucleotides Echvi_2091 and Echvi_2092 are separated by 232 nucleotides
Echvi_2089: Echvi_2089 - gluconate transporter, at 2,465,406 to 2,466,722
_2089
Echvi_2090: Echvi_2090 - Putative translation initiation inhibitor, yjgF family, at 2,466,845 to 2,467,306
_2090
Echvi_2091: Echvi_2091 - Predicted amino acid aldolase or racemase, at 2,467,325 to 2,468,431
_2091
Echvi_2092: Echvi_2092 - Zn-dependent dipeptidase, microsomal dipeptidase homolog, at 2,468,664 to 2,469,728
_2092
Position (kb)
2467
2468
2469 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2466.338 kb on - strand, within Echvi_2089 at 2466.346 kb on + strand, within Echvi_2089 at 2466.346 kb on + strand, within Echvi_2089 at 2466.347 kb on - strand, within Echvi_2089 at 2466.347 kb on - strand, within Echvi_2089 at 2466.432 kb on - strand, within Echvi_2089 at 2466.494 kb on + strand, within Echvi_2089 at 2466.581 kb on + strand, within Echvi_2089 at 2466.581 kb on + strand, within Echvi_2089 at 2466.582 kb on - strand, within Echvi_2089 at 2466.603 kb on + strand at 2466.603 kb on + strand at 2466.603 kb on + strand at 2466.603 kb on + strand at 2466.603 kb on + strand at 2466.603 kb on + strand at 2466.604 kb on - strand at 2466.604 kb on - strand at 2466.604 kb on - strand at 2466.604 kb on - strand at 2466.604 kb on - strand at 2466.605 kb on + strand at 2466.606 kb on - strand at 2466.774 kb on - strand at 2466.793 kb on - strand at 2466.826 kb on - strand at 2466.914 kb on + strand, within Echvi_2090 at 2466.914 kb on + strand, within Echvi_2090 at 2466.915 kb on - strand, within Echvi_2090 at 2466.915 kb on - strand, within Echvi_2090 at 2466.915 kb on - strand, within Echvi_2090 at 2466.929 kb on - strand, within Echvi_2090 at 2466.941 kb on + strand, within Echvi_2090 at 2466.942 kb on - strand, within Echvi_2090 at 2466.942 kb on - strand, within Echvi_2090 at 2466.942 kb on - strand, within Echvi_2090 at 2466.947 kb on + strand, within Echvi_2090 at 2466.947 kb on + strand, within Echvi_2090 at 2466.947 kb on + strand, within Echvi_2090 at 2466.948 kb on - strand, within Echvi_2090 at 2466.948 kb on - strand, within Echvi_2090 at 2466.948 kb on - strand, within Echvi_2090 at 2466.948 kb on - strand, within Echvi_2090 at 2466.948 kb on - strand, within Echvi_2090 at 2467.118 kb on - strand, within Echvi_2090 at 2467.166 kb on + strand, within Echvi_2090 at 2467.166 kb on + strand, within Echvi_2090 at 2467.169 kb on - strand, within Echvi_2090 at 2467.264 kb on + strand at 2467.406 kb on - strand at 2467.467 kb on + strand, within Echvi_2091 at 2467.520 kb on - strand, within Echvi_2091 at 2467.520 kb on - strand, within Echvi_2091 at 2467.528 kb on + strand, within Echvi_2091 at 2467.529 kb on - strand, within Echvi_2091 at 2467.575 kb on + strand, within Echvi_2091 at 2467.575 kb on + strand, within Echvi_2091 at 2467.706 kb on + strand, within Echvi_2091 at 2467.707 kb on - strand, within Echvi_2091 at 2467.707 kb on - strand, within Echvi_2091 at 2467.707 kb on - strand, within Echvi_2091 at 2467.707 kb on - strand, within Echvi_2091 at 2467.722 kb on - strand, within Echvi_2091 at 2467.770 kb on + strand, within Echvi_2091 at 2467.771 kb on - strand, within Echvi_2091 at 2467.771 kb on - strand, within Echvi_2091 at 2467.800 kb on - strand, within Echvi_2091 at 2467.832 kb on - strand, within Echvi_2091 at 2467.850 kb on + strand, within Echvi_2091 at 2467.850 kb on + strand, within Echvi_2091 at 2467.851 kb on - strand, within Echvi_2091 at 2467.870 kb on + strand, within Echvi_2091 at 2467.952 kb on + strand, within Echvi_2091 at 2467.953 kb on - strand, within Echvi_2091 at 2467.965 kb on + strand, within Echvi_2091 at 2467.972 kb on - strand, within Echvi_2091 at 2468.161 kb on - strand, within Echvi_2091 at 2468.167 kb on + strand, within Echvi_2091 at 2468.205 kb on + strand, within Echvi_2091 at 2468.206 kb on - strand, within Echvi_2091 at 2468.271 kb on + strand, within Echvi_2091 at 2468.271 kb on + strand, within Echvi_2091 at 2468.271 kb on + strand, within Echvi_2091 at 2468.272 kb on - strand, within Echvi_2091 at 2468.272 kb on - strand, within Echvi_2091 at 2468.272 kb on - strand, within Echvi_2091 at 2468.272 kb on - strand, within Echvi_2091 at 2468.275 kb on + strand, within Echvi_2091 at 2468.276 kb on - strand, within Echvi_2091 at 2468.284 kb on + strand, within Echvi_2091 at 2468.284 kb on + strand, within Echvi_2091 at 2468.284 kb on + strand, within Echvi_2091 at 2468.309 kb on + strand, within Echvi_2091 at 2468.310 kb on - strand, within Echvi_2091 at 2468.310 kb on - strand, within Echvi_2091 at 2468.326 kb on + strand at 2468.326 kb on + strand at 2468.326 kb on + strand at 2468.326 kb on + strand at 2468.326 kb on + strand at 2468.326 kb on + strand at 2468.327 kb on - strand at 2468.327 kb on - strand at 2468.327 kb on - strand at 2468.335 kb on + strand at 2468.348 kb on + strand at 2468.348 kb on + strand at 2468.348 kb on + strand at 2468.348 kb on + strand at 2468.348 kb on + strand at 2468.348 kb on + strand at 2468.348 kb on + strand at 2468.348 kb on + strand at 2468.349 kb on - strand at 2468.349 kb on - strand at 2468.349 kb on - strand at 2468.349 kb on - strand at 2468.349 kb on - strand at 2468.349 kb on - strand at 2468.372 kb on - strand at 2468.377 kb on + strand at 2468.378 kb on - strand at 2468.423 kb on - strand at 2468.425 kb on + strand at 2468.433 kb on - strand at 2468.464 kb on + strand at 2468.464 kb on + strand at 2468.465 kb on - strand at 2468.465 kb on - strand at 2468.485 kb on - strand at 2468.485 kb on - strand at 2468.517 kb on + strand at 2468.517 kb on + strand at 2468.517 kb on + strand at 2468.571 kb on + strand at 2468.618 kb on - strand at 2468.618 kb on - strand at 2468.634 kb on - strand at 2468.636 kb on + strand at 2468.636 kb on + strand at 2468.637 kb on - strand at 2468.637 kb on - strand at 2468.637 kb on - strand at 2468.637 kb on - strand at 2468.642 kb on + strand at 2468.642 kb on + strand at 2468.643 kb on - strand at 2468.828 kb on + strand, within Echvi_2092 at 2468.829 kb on - strand, within Echvi_2092 at 2468.944 kb on - strand, within Echvi_2092 at 2468.944 kb on - strand, within Echvi_2092 at 2469.053 kb on + strand, within Echvi_2092 at 2469.053 kb on + strand, within Echvi_2092 at 2469.054 kb on - strand, within Echvi_2092 at 2469.054 kb on - strand, within Echvi_2092 at 2469.111 kb on + strand, within Echvi_2092 at 2469.112 kb on - strand, within Echvi_2092 at 2469.118 kb on - strand, within Echvi_2092 at 2469.148 kb on - strand, within Echvi_2092 at 2469.163 kb on - strand, within Echvi_2092 at 2469.242 kb on - strand, within Echvi_2092 at 2469.272 kb on + strand, within Echvi_2092 at 2469.324 kb on - strand, within Echvi_2092
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 2,466,338 - Echvi_2089 0.71 +0.1 2,466,346 + Echvi_2089 0.71 -1.4 2,466,346 + Echvi_2089 0.71 +1.7 2,466,347 - Echvi_2089 0.71 +0.4 2,466,347 - Echvi_2089 0.71 -0.5 2,466,432 - Echvi_2089 0.78 -0.8 2,466,494 + Echvi_2089 0.83 -0.8 2,466,581 + Echvi_2089 0.89 -0.3 2,466,581 + Echvi_2089 0.89 +0.8 2,466,582 - Echvi_2089 0.89 +0.3 2,466,603 + -1.5 2,466,603 + -0.1 2,466,603 + -0.3 2,466,603 + -0.1 2,466,603 + -0.0 2,466,603 + +0.2 2,466,604 - -0.8 2,466,604 - +0.2 2,466,604 - -0.2 2,466,604 - -0.6 2,466,604 - +0.8 2,466,605 + -1.7 2,466,606 - -0.6 2,466,774 - -0.0 2,466,793 - -1.4 2,466,826 - +0.3 2,466,914 + Echvi_2090 0.15 -0.8 2,466,914 + Echvi_2090 0.15 -0.2 2,466,915 - Echvi_2090 0.15 +0.1 2,466,915 - Echvi_2090 0.15 -0.2 2,466,915 - Echvi_2090 0.15 -0.0 2,466,929 - Echvi_2090 0.18 +1.8 2,466,941 + Echvi_2090 0.21 +0.4 2,466,942 - Echvi_2090 0.21 +0.1 2,466,942 - Echvi_2090 0.21 +0.3 2,466,942 - Echvi_2090 0.21 +0.3 2,466,947 + Echvi_2090 0.22 -0.2 2,466,947 + Echvi_2090 0.22 -0.4 2,466,947 + Echvi_2090 0.22 -0.7 2,466,948 - Echvi_2090 0.22 -0.3 2,466,948 - Echvi_2090 0.22 +0.1 2,466,948 - Echvi_2090 0.22 +0.9 2,466,948 - Echvi_2090 0.22 -0.0 2,466,948 - Echvi_2090 0.22 -0.3 2,467,118 - Echvi_2090 0.59 -0.2 2,467,166 + Echvi_2090 0.69 -0.3 2,467,166 + Echvi_2090 0.69 -0.5 2,467,169 - Echvi_2090 0.70 +1.1 2,467,264 + -0.4 2,467,406 - -0.2 2,467,467 + Echvi_2091 0.13 -1.0 2,467,520 - Echvi_2091 0.18 -1.0 2,467,520 - Echvi_2091 0.18 +0.0 2,467,528 + Echvi_2091 0.18 -0.9 2,467,529 - Echvi_2091 0.18 -0.1 2,467,575 + Echvi_2091 0.23 +0.2 2,467,575 + Echvi_2091 0.23 -1.1 2,467,706 + Echvi_2091 0.34 -2.0 2,467,707 - Echvi_2091 0.35 -1.2 2,467,707 - Echvi_2091 0.35 +0.1 2,467,707 - Echvi_2091 0.35 +0.1 2,467,707 - Echvi_2091 0.35 -0.8 2,467,722 - Echvi_2091 0.36 -0.4 2,467,770 + Echvi_2091 0.40 +0.1 2,467,771 - Echvi_2091 0.40 -0.8 2,467,771 - Echvi_2091 0.40 +2.0 2,467,800 - Echvi_2091 0.43 -1.5 2,467,832 - Echvi_2091 0.46 -1.1 2,467,850 + Echvi_2091 0.47 -0.2 2,467,850 + Echvi_2091 0.47 -1.1 2,467,851 - Echvi_2091 0.48 -1.1 2,467,870 + Echvi_2091 0.49 -0.3 2,467,952 + Echvi_2091 0.57 +0.8 2,467,953 - Echvi_2091 0.57 -0.3 2,467,965 + Echvi_2091 0.58 -0.3 2,467,972 - Echvi_2091 0.58 -1.7 2,468,161 - Echvi_2091 0.76 -0.2 2,468,167 + Echvi_2091 0.76 -1.0 2,468,205 + Echvi_2091 0.79 -1.3 2,468,206 - Echvi_2091 0.80 -1.1 2,468,271 + Echvi_2091 0.85 -0.9 2,468,271 + Echvi_2091 0.85 -1.2 2,468,271 + Echvi_2091 0.85 -0.5 2,468,272 - Echvi_2091 0.86 +0.5 2,468,272 - Echvi_2091 0.86 -0.3 2,468,272 - Echvi_2091 0.86 +0.9 2,468,272 - Echvi_2091 0.86 -0.1 2,468,275 + Echvi_2091 0.86 +0.5 2,468,276 - Echvi_2091 0.86 +0.2 2,468,284 + Echvi_2091 0.87 -1.2 2,468,284 + Echvi_2091 0.87 -0.3 2,468,284 + Echvi_2091 0.87 +0.7 2,468,309 + Echvi_2091 0.89 -0.4 2,468,310 - Echvi_2091 0.89 +0.6 2,468,310 - Echvi_2091 0.89 -0.1 2,468,326 + +0.7 2,468,326 + +0.9 2,468,326 + +1.1 2,468,326 + -0.3 2,468,326 + -0.4 2,468,326 + +0.5 2,468,327 - -1.9 2,468,327 - +0.2 2,468,327 - +0.9 2,468,335 + -0.5 2,468,348 + -1.2 2,468,348 + -0.8 2,468,348 + +0.0 2,468,348 + -0.5 2,468,348 + -1.0 2,468,348 + -0.3 2,468,348 + -0.4 2,468,348 + -0.1 2,468,349 - +0.5 2,468,349 - -0.5 2,468,349 - -0.3 2,468,349 - -0.7 2,468,349 - -0.6 2,468,349 - +0.0 2,468,372 - +0.2 2,468,377 + +0.2 2,468,378 - -0.7 2,468,423 - +0.5 2,468,425 + -0.5 2,468,433 - +0.3 2,468,464 + -1.7 2,468,464 + -0.5 2,468,465 - -0.0 2,468,465 - +0.0 2,468,485 - +1.1 2,468,485 - +0.6 2,468,517 + -1.3 2,468,517 + -0.6 2,468,517 + -0.0 2,468,571 + -1.2 2,468,618 - -0.5 2,468,618 - -0.8 2,468,634 - +0.5 2,468,636 + +0.2 2,468,636 + -1.1 2,468,637 - +1.3 2,468,637 - -0.5 2,468,637 - +0.7 2,468,637 - -0.1 2,468,642 + +0.7 2,468,642 + -0.2 2,468,643 - +0.2 2,468,828 + Echvi_2092 0.15 -0.4 2,468,829 - Echvi_2092 0.15 +0.8 2,468,944 - Echvi_2092 0.26 -1.7 2,468,944 - Echvi_2092 0.26 -0.3 2,469,053 + Echvi_2092 0.37 +0.5 2,469,053 + Echvi_2092 0.37 +0.3 2,469,054 - Echvi_2092 0.37 +0.4 2,469,054 - Echvi_2092 0.37 -1.0 2,469,111 + Echvi_2092 0.42 +1.7 2,469,112 - Echvi_2092 0.42 +1.0 2,469,118 - Echvi_2092 0.43 +1.3 2,469,148 - Echvi_2092 0.45 -0.3 2,469,163 - Echvi_2092 0.47 +0.8 2,469,242 - Echvi_2092 0.54 -2.0 2,469,272 + Echvi_2092 0.57 +0.7 2,469,324 - Echvi_2092 0.62 -0.3
Or see this region's nucleotide sequence