Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1750 and Echvi_1751 are separated by 6 nucleotides Echvi_1751 and Echvi_1752 are separated by 118 nucleotides Echvi_1752 and Echvi_1753 are separated by 507 nucleotides
Echvi_1750: Echvi_1750 - Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit, at 2,060,496 to 2,062,481
_1750
Echvi_1751: Echvi_1751 - Uncharacterized Fe-S protein, at 2,062,488 to 2,063,285
_1751
Echvi_1752: Echvi_1752 - hypothetical protein, at 2,063,404 to 2,063,634
_1752
Echvi_1753: Echvi_1753 - chaperone protein DnaK, at 2,064,142 to 2,066,082
_1753
Position (kb)
2062
2063
2064 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2061.565 kb on + strand, within Echvi_1750 at 2061.619 kb on - strand, within Echvi_1750 at 2061.619 kb on - strand, within Echvi_1750 at 2061.692 kb on - strand, within Echvi_1750 at 2061.692 kb on - strand, within Echvi_1750 at 2061.779 kb on - strand, within Echvi_1750 at 2061.908 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.031 kb on + strand, within Echvi_1750 at 2062.032 kb on - strand, within Echvi_1750 at 2062.032 kb on - strand, within Echvi_1750 at 2062.032 kb on - strand, within Echvi_1750 at 2062.055 kb on - strand, within Echvi_1750 at 2062.075 kb on - strand, within Echvi_1750 at 2062.075 kb on - strand, within Echvi_1750 at 2062.077 kb on + strand, within Echvi_1750 at 2062.078 kb on - strand, within Echvi_1750 at 2062.078 kb on - strand, within Echvi_1750 at 2062.079 kb on + strand, within Echvi_1750 at 2062.140 kb on + strand, within Echvi_1750 at 2062.140 kb on + strand, within Echvi_1750 at 2062.140 kb on + strand, within Echvi_1750 at 2062.274 kb on - strand, within Echvi_1750 at 2062.274 kb on - strand, within Echvi_1750 at 2062.274 kb on - strand, within Echvi_1750 at 2062.418 kb on - strand at 2062.455 kb on - strand at 2062.589 kb on + strand, within Echvi_1751 at 2062.589 kb on + strand, within Echvi_1751 at 2062.685 kb on + strand, within Echvi_1751 at 2062.685 kb on + strand, within Echvi_1751 at 2062.685 kb on + strand, within Echvi_1751 at 2062.695 kb on + strand, within Echvi_1751 at 2062.696 kb on - strand, within Echvi_1751 at 2062.704 kb on - strand, within Echvi_1751 at 2062.834 kb on + strand, within Echvi_1751 at 2062.966 kb on - strand, within Echvi_1751 at 2063.086 kb on - strand, within Echvi_1751 at 2063.086 kb on - strand, within Echvi_1751 at 2063.121 kb on + strand, within Echvi_1751 at 2063.121 kb on + strand, within Echvi_1751 at 2063.210 kb on + strand at 2063.211 kb on - strand at 2063.211 kb on - strand at 2063.211 kb on - strand at 2063.225 kb on + strand at 2063.225 kb on + strand at 2063.226 kb on - strand at 2063.226 kb on - strand at 2063.230 kb on - strand at 2063.260 kb on + strand at 2063.261 kb on - strand at 2063.261 kb on - strand at 2063.266 kb on + strand at 2063.267 kb on - strand at 2063.267 kb on - strand at 2063.267 kb on - strand at 2063.267 kb on - strand at 2063.267 kb on - strand at 2063.269 kb on - strand at 2063.297 kb on - strand at 2063.304 kb on + strand at 2063.370 kb on + strand at 2063.371 kb on - strand at 2063.371 kb on - strand at 2063.470 kb on + strand, within Echvi_1752 at 2063.520 kb on + strand, within Echvi_1752 at 2063.521 kb on - strand, within Echvi_1752 at 2063.590 kb on + strand, within Echvi_1752 at 2063.591 kb on - strand, within Echvi_1752 at 2063.604 kb on + strand, within Echvi_1752 at 2063.605 kb on - strand, within Echvi_1752 at 2063.605 kb on - strand, within Echvi_1752 at 2063.717 kb on + strand at 2063.738 kb on + strand at 2063.799 kb on + strand at 2063.837 kb on + strand at 2063.926 kb on + strand at 2063.926 kb on + strand at 2063.927 kb on - strand at 2063.927 kb on - strand at 2063.927 kb on - strand at 2063.989 kb on + strand at 2064.095 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 2,061,565 + Echvi_1750 0.54 +0.0 2,061,619 - Echvi_1750 0.57 -1.0 2,061,619 - Echvi_1750 0.57 +0.7 2,061,692 - Echvi_1750 0.60 +1.6 2,061,692 - Echvi_1750 0.60 -1.5 2,061,779 - Echvi_1750 0.65 -0.2 2,061,908 + Echvi_1750 0.71 -0.2 2,062,031 + Echvi_1750 0.77 -0.3 2,062,031 + Echvi_1750 0.77 +0.0 2,062,031 + Echvi_1750 0.77 +0.6 2,062,031 + Echvi_1750 0.77 -0.1 2,062,031 + Echvi_1750 0.77 +0.9 2,062,031 + Echvi_1750 0.77 -0.2 2,062,032 - Echvi_1750 0.77 +0.1 2,062,032 - Echvi_1750 0.77 +0.8 2,062,032 - Echvi_1750 0.77 +0.7 2,062,055 - Echvi_1750 0.78 +0.9 2,062,075 - Echvi_1750 0.80 +0.3 2,062,075 - Echvi_1750 0.80 +1.6 2,062,077 + Echvi_1750 0.80 -0.2 2,062,078 - Echvi_1750 0.80 -0.5 2,062,078 - Echvi_1750 0.80 +0.6 2,062,079 + Echvi_1750 0.80 +0.1 2,062,140 + Echvi_1750 0.83 -0.5 2,062,140 + Echvi_1750 0.83 -0.4 2,062,140 + Echvi_1750 0.83 -0.8 2,062,274 - Echvi_1750 0.90 +0.6 2,062,274 - Echvi_1750 0.90 -1.0 2,062,274 - Echvi_1750 0.90 +1.6 2,062,418 - -1.0 2,062,455 - +3.2 2,062,589 + Echvi_1751 0.13 -1.4 2,062,589 + Echvi_1751 0.13 -0.5 2,062,685 + Echvi_1751 0.25 -0.0 2,062,685 + Echvi_1751 0.25 -0.7 2,062,685 + Echvi_1751 0.25 -1.6 2,062,695 + Echvi_1751 0.26 -0.1 2,062,696 - Echvi_1751 0.26 +0.4 2,062,704 - Echvi_1751 0.27 -1.1 2,062,834 + Echvi_1751 0.43 +0.2 2,062,966 - Echvi_1751 0.60 -0.2 2,063,086 - Echvi_1751 0.75 -0.8 2,063,086 - Echvi_1751 0.75 +1.9 2,063,121 + Echvi_1751 0.79 -0.3 2,063,121 + Echvi_1751 0.79 +0.2 2,063,210 + +0.5 2,063,211 - +0.4 2,063,211 - -0.4 2,063,211 - -0.1 2,063,225 + +0.6 2,063,225 + -1.2 2,063,226 - -0.4 2,063,226 - -0.5 2,063,230 - -0.2 2,063,260 + -0.8 2,063,261 - -0.2 2,063,261 - +1.6 2,063,266 + -1.3 2,063,267 - -0.1 2,063,267 - -0.0 2,063,267 - +0.5 2,063,267 - -0.1 2,063,267 - -1.5 2,063,269 - -1.1 2,063,297 - -1.0 2,063,304 + +1.7 2,063,370 + +0.1 2,063,371 - +0.2 2,063,371 - +0.4 2,063,470 + Echvi_1752 0.29 -0.6 2,063,520 + Echvi_1752 0.50 -2.0 2,063,521 - Echvi_1752 0.51 +2.6 2,063,590 + Echvi_1752 0.81 +0.4 2,063,591 - Echvi_1752 0.81 -1.3 2,063,604 + Echvi_1752 0.87 +0.3 2,063,605 - Echvi_1752 0.87 -1.9 2,063,605 - Echvi_1752 0.87 +2.6 2,063,717 + +0.8 2,063,738 + +0.6 2,063,799 + +1.0 2,063,837 + +0.5 2,063,926 + +0.4 2,063,926 + +0.9 2,063,927 - +0.2 2,063,927 - -0.8 2,063,927 - -0.0 2,063,989 + -0.7 2,064,095 + +1.3
Or see this region's nucleotide sequence