Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0927 and Echvi_0928 are separated by 322 nucleotides Echvi_0928 and Echvi_0929 are separated by 2 nucleotides
Echvi_0927: Echvi_0927 - Glycogen debranching enzyme, at 1,062,967 to 1,065,801
_0927
Echvi_0928: Echvi_0928 - hypothetical protein, at 1,066,124 to 1,068,079
_0928
Echvi_0929: Echvi_0929 - Beta-fructosidases (levanase/invertase), at 1,068,082 to 1,069,026
_0929
Position (kb)
1066
1067
1068
1069 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1065.134 kb on + strand, within Echvi_0927 at 1065.135 kb on - strand, within Echvi_0927 at 1065.155 kb on + strand, within Echvi_0927 at 1065.155 kb on + strand, within Echvi_0927 at 1065.155 kb on + strand, within Echvi_0927 at 1065.155 kb on + strand, within Echvi_0927 at 1065.156 kb on - strand, within Echvi_0927 at 1065.156 kb on - strand, within Echvi_0927 at 1065.156 kb on - strand, within Echvi_0927 at 1065.156 kb on - strand, within Echvi_0927 at 1065.285 kb on - strand, within Echvi_0927 at 1065.285 kb on - strand, within Echvi_0927 at 1065.359 kb on + strand, within Echvi_0927 at 1065.359 kb on + strand, within Echvi_0927 at 1065.359 kb on + strand, within Echvi_0927 at 1065.360 kb on - strand, within Echvi_0927 at 1065.360 kb on - strand, within Echvi_0927 at 1065.360 kb on - strand, within Echvi_0927 at 1065.405 kb on + strand, within Echvi_0927 at 1065.405 kb on + strand, within Echvi_0927 at 1065.406 kb on - strand, within Echvi_0927 at 1065.428 kb on - strand, within Echvi_0927 at 1065.441 kb on - strand, within Echvi_0927 at 1065.441 kb on - strand, within Echvi_0927 at 1065.699 kb on + strand at 1065.700 kb on - strand at 1065.700 kb on - strand at 1065.727 kb on + strand at 1065.730 kb on + strand at 1065.730 kb on + strand at 1065.731 kb on - strand at 1065.731 kb on - strand at 1065.781 kb on - strand at 1065.781 kb on - strand at 1065.857 kb on + strand at 1065.899 kb on + strand at 1065.900 kb on - strand at 1065.908 kb on + strand at 1065.914 kb on + strand at 1065.914 kb on + strand at 1065.914 kb on + strand at 1065.915 kb on - strand at 1065.932 kb on + strand at 1065.932 kb on + strand at 1066.051 kb on + strand at 1066.051 kb on + strand at 1066.052 kb on - strand at 1066.052 kb on - strand at 1066.058 kb on + strand at 1066.070 kb on + strand at 1066.070 kb on + strand at 1066.070 kb on + strand at 1066.070 kb on + strand at 1066.070 kb on + strand at 1066.070 kb on + strand at 1066.071 kb on - strand at 1066.071 kb on - strand at 1066.077 kb on + strand at 1066.078 kb on - strand at 1066.090 kb on + strand at 1066.125 kb on + strand at 1066.125 kb on + strand at 1066.125 kb on + strand at 1066.126 kb on - strand at 1066.128 kb on + strand at 1066.128 kb on + strand at 1066.128 kb on + strand at 1066.129 kb on - strand at 1066.195 kb on - strand at 1066.195 kb on - strand at 1066.231 kb on - strand at 1066.231 kb on - strand at 1066.316 kb on + strand at 1066.317 kb on - strand at 1066.349 kb on + strand, within Echvi_0928 at 1066.349 kb on + strand, within Echvi_0928 at 1066.350 kb on - strand, within Echvi_0928 at 1066.369 kb on - strand, within Echvi_0928 at 1066.386 kb on + strand, within Echvi_0928 at 1066.400 kb on - strand, within Echvi_0928 at 1066.532 kb on - strand, within Echvi_0928 at 1066.553 kb on - strand, within Echvi_0928 at 1066.566 kb on - strand, within Echvi_0928 at 1066.617 kb on + strand, within Echvi_0928 at 1066.633 kb on + strand, within Echvi_0928 at 1066.668 kb on + strand, within Echvi_0928 at 1066.668 kb on + strand, within Echvi_0928 at 1066.668 kb on + strand, within Echvi_0928 at 1066.668 kb on + strand, within Echvi_0928 at 1066.668 kb on + strand, within Echvi_0928 at 1066.668 kb on + strand, within Echvi_0928 at 1066.668 kb on + strand, within Echvi_0928 at 1066.669 kb on - strand, within Echvi_0928 at 1066.669 kb on - strand, within Echvi_0928 at 1066.775 kb on + strand, within Echvi_0928 at 1066.775 kb on + strand, within Echvi_0928 at 1066.776 kb on - strand, within Echvi_0928 at 1066.776 kb on - strand, within Echvi_0928 at 1066.797 kb on + strand, within Echvi_0928 at 1066.797 kb on + strand, within Echvi_0928 at 1066.798 kb on - strand, within Echvi_0928 at 1066.798 kb on - strand, within Echvi_0928 at 1066.798 kb on - strand, within Echvi_0928 at 1066.798 kb on - strand, within Echvi_0928 at 1066.878 kb on + strand, within Echvi_0928 at 1066.917 kb on - strand, within Echvi_0928 at 1066.936 kb on - strand, within Echvi_0928 at 1066.994 kb on - strand, within Echvi_0928 at 1066.995 kb on + strand, within Echvi_0928 at 1066.995 kb on + strand, within Echvi_0928 at 1066.995 kb on + strand, within Echvi_0928 at 1066.995 kb on + strand, within Echvi_0928 at 1067.082 kb on + strand, within Echvi_0928 at 1067.082 kb on + strand, within Echvi_0928 at 1067.082 kb on + strand, within Echvi_0928 at 1067.174 kb on - strand, within Echvi_0928 at 1067.311 kb on - strand, within Echvi_0928 at 1067.350 kb on + strand, within Echvi_0928 at 1067.351 kb on - strand, within Echvi_0928 at 1067.351 kb on - strand, within Echvi_0928 at 1067.422 kb on + strand, within Echvi_0928 at 1067.463 kb on + strand, within Echvi_0928 at 1067.463 kb on + strand, within Echvi_0928 at 1067.464 kb on - strand, within Echvi_0928 at 1067.464 kb on - strand, within Echvi_0928 at 1067.466 kb on + strand, within Echvi_0928 at 1067.466 kb on + strand, within Echvi_0928 at 1067.502 kb on + strand, within Echvi_0928 at 1067.503 kb on - strand, within Echvi_0928 at 1067.503 kb on - strand, within Echvi_0928 at 1067.584 kb on + strand, within Echvi_0928 at 1067.694 kb on + strand, within Echvi_0928 at 1067.694 kb on + strand, within Echvi_0928 at 1067.703 kb on + strand, within Echvi_0928 at 1067.745 kb on + strand, within Echvi_0928 at 1067.745 kb on + strand, within Echvi_0928 at 1067.746 kb on - strand, within Echvi_0928 at 1067.746 kb on - strand, within Echvi_0928 at 1067.831 kb on + strand, within Echvi_0928 at 1067.866 kb on + strand, within Echvi_0928 at 1067.866 kb on + strand, within Echvi_0928 at 1067.867 kb on - strand, within Echvi_0928 at 1067.867 kb on - strand, within Echvi_0928 at 1067.877 kb on + strand, within Echvi_0928 at 1067.878 kb on - strand, within Echvi_0928 at 1067.949 kb on - strand at 1067.963 kb on - strand at 1068.107 kb on - strand at 1068.153 kb on + strand at 1068.154 kb on - strand at 1068.193 kb on - strand, within Echvi_0929 at 1068.243 kb on - strand, within Echvi_0929 at 1068.243 kb on - strand, within Echvi_0929 at 1068.255 kb on - strand, within Echvi_0929 at 1068.255 kb on - strand, within Echvi_0929 at 1068.268 kb on - strand, within Echvi_0929 at 1068.288 kb on + strand, within Echvi_0929 at 1068.326 kb on + strand, within Echvi_0929 at 1068.393 kb on + strand, within Echvi_0929 at 1068.393 kb on + strand, within Echvi_0929 at 1068.393 kb on + strand, within Echvi_0929 at 1068.393 kb on + strand, within Echvi_0929 at 1068.393 kb on + strand, within Echvi_0929 at 1068.394 kb on - strand, within Echvi_0929 at 1068.404 kb on - strand, within Echvi_0929 at 1068.490 kb on - strand, within Echvi_0929 at 1068.518 kb on + strand, within Echvi_0929 at 1068.518 kb on + strand, within Echvi_0929 at 1068.518 kb on + strand, within Echvi_0929 at 1068.521 kb on + strand, within Echvi_0929 at 1068.521 kb on + strand, within Echvi_0929 at 1068.620 kb on + strand, within Echvi_0929 at 1068.620 kb on + strand, within Echvi_0929 at 1068.650 kb on - strand, within Echvi_0929 at 1068.669 kb on + strand, within Echvi_0929 at 1068.670 kb on - strand, within Echvi_0929 at 1068.679 kb on - strand, within Echvi_0929 at 1068.761 kb on - strand, within Echvi_0929 at 1068.884 kb on + strand, within Echvi_0929 at 1068.894 kb on - strand, within Echvi_0929 at 1068.894 kb on - strand, within Echvi_0929 at 1068.894 kb on - strand, within Echvi_0929 at 1068.936 kb on - strand at 1068.939 kb on - strand at 1068.986 kb on - strand at 1069.017 kb on + strand at 1069.030 kb on + strand at 1069.030 kb on + strand at 1069.076 kb on + strand at 1069.076 kb on + strand at 1069.076 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 1,065,134 + Echvi_0927 0.76 -1.5 1,065,135 - Echvi_0927 0.76 +0.6 1,065,155 + Echvi_0927 0.77 -2.9 1,065,155 + Echvi_0927 0.77 -1.3 1,065,155 + Echvi_0927 0.77 -0.2 1,065,155 + Echvi_0927 0.77 +0.1 1,065,156 - Echvi_0927 0.77 +0.4 1,065,156 - Echvi_0927 0.77 +1.2 1,065,156 - Echvi_0927 0.77 -1.9 1,065,156 - Echvi_0927 0.77 +2.4 1,065,285 - Echvi_0927 0.82 -0.1 1,065,285 - Echvi_0927 0.82 -0.1 1,065,359 + Echvi_0927 0.84 -0.2 1,065,359 + Echvi_0927 0.84 -0.6 1,065,359 + Echvi_0927 0.84 -1.4 1,065,360 - Echvi_0927 0.84 +0.1 1,065,360 - Echvi_0927 0.84 +0.4 1,065,360 - Echvi_0927 0.84 +0.7 1,065,405 + Echvi_0927 0.86 +1.7 1,065,405 + Echvi_0927 0.86 -1.2 1,065,406 - Echvi_0927 0.86 +0.2 1,065,428 - Echvi_0927 0.87 -0.1 1,065,441 - Echvi_0927 0.87 -3.2 1,065,441 - Echvi_0927 0.87 -0.3 1,065,699 + +0.1 1,065,700 - +0.8 1,065,700 - +0.8 1,065,727 + -0.4 1,065,730 + -0.8 1,065,730 + +0.7 1,065,731 - +0.3 1,065,731 - +0.5 1,065,781 - -1.2 1,065,781 - -0.4 1,065,857 + -0.5 1,065,899 + -0.5 1,065,900 - +0.2 1,065,908 + -0.6 1,065,914 + -1.3 1,065,914 + -1.5 1,065,914 + +0.7 1,065,915 - +0.1 1,065,932 + -1.3 1,065,932 + -0.1 1,066,051 + -0.7 1,066,051 + +0.4 1,066,052 - -0.5 1,066,052 - +0.7 1,066,058 + +0.1 1,066,070 + -0.4 1,066,070 + +0.1 1,066,070 + -1.3 1,066,070 + -0.4 1,066,070 + -1.0 1,066,070 + +0.4 1,066,071 - +0.1 1,066,071 - -1.8 1,066,077 + -0.4 1,066,078 - -0.3 1,066,090 + -0.8 1,066,125 + +0.9 1,066,125 + -1.1 1,066,125 + -1.2 1,066,126 - -0.1 1,066,128 + +0.6 1,066,128 + +0.2 1,066,128 + -0.7 1,066,129 - -0.2 1,066,195 - +0.7 1,066,195 - -0.0 1,066,231 - -0.2 1,066,231 - +0.3 1,066,316 + +0.4 1,066,317 - -1.9 1,066,349 + Echvi_0928 0.12 +1.3 1,066,349 + Echvi_0928 0.12 -0.7 1,066,350 - Echvi_0928 0.12 -0.2 1,066,369 - Echvi_0928 0.13 +0.5 1,066,386 + Echvi_0928 0.13 +1.2 1,066,400 - Echvi_0928 0.14 -0.0 1,066,532 - Echvi_0928 0.21 +0.4 1,066,553 - Echvi_0928 0.22 +1.1 1,066,566 - Echvi_0928 0.23 -0.5 1,066,617 + Echvi_0928 0.25 -0.5 1,066,633 + Echvi_0928 0.26 +0.7 1,066,668 + Echvi_0928 0.28 -0.6 1,066,668 + Echvi_0928 0.28 -1.1 1,066,668 + Echvi_0928 0.28 -1.8 1,066,668 + Echvi_0928 0.28 +0.0 1,066,668 + Echvi_0928 0.28 -0.0 1,066,668 + Echvi_0928 0.28 +0.6 1,066,668 + Echvi_0928 0.28 -0.8 1,066,669 - Echvi_0928 0.28 -0.2 1,066,669 - Echvi_0928 0.28 +0.4 1,066,775 + Echvi_0928 0.33 +0.2 1,066,775 + Echvi_0928 0.33 -1.1 1,066,776 - Echvi_0928 0.33 +0.2 1,066,776 - Echvi_0928 0.33 -1.1 1,066,797 + Echvi_0928 0.34 -0.6 1,066,797 + Echvi_0928 0.34 -0.5 1,066,798 - Echvi_0928 0.34 +0.4 1,066,798 - Echvi_0928 0.34 -0.3 1,066,798 - Echvi_0928 0.34 +0.7 1,066,798 - Echvi_0928 0.34 +0.2 1,066,878 + Echvi_0928 0.39 -0.2 1,066,917 - Echvi_0928 0.41 +1.4 1,066,936 - Echvi_0928 0.42 +1.0 1,066,994 - Echvi_0928 0.44 -0.5 1,066,995 + Echvi_0928 0.45 -0.6 1,066,995 + Echvi_0928 0.45 -0.1 1,066,995 + Echvi_0928 0.45 -1.2 1,066,995 + Echvi_0928 0.45 +0.4 1,067,082 + Echvi_0928 0.49 -1.7 1,067,082 + Echvi_0928 0.49 -0.2 1,067,082 + Echvi_0928 0.49 -0.6 1,067,174 - Echvi_0928 0.54 +0.6 1,067,311 - Echvi_0928 0.61 -0.2 1,067,350 + Echvi_0928 0.63 -0.2 1,067,351 - Echvi_0928 0.63 +0.4 1,067,351 - Echvi_0928 0.63 -1.1 1,067,422 + Echvi_0928 0.66 +0.6 1,067,463 + Echvi_0928 0.68 +0.4 1,067,463 + Echvi_0928 0.68 +0.3 1,067,464 - Echvi_0928 0.69 +0.4 1,067,464 - Echvi_0928 0.69 +0.4 1,067,466 + Echvi_0928 0.69 +0.2 1,067,466 + Echvi_0928 0.69 -1.4 1,067,502 + Echvi_0928 0.70 +0.3 1,067,503 - Echvi_0928 0.71 -0.1 1,067,503 - Echvi_0928 0.71 -0.1 1,067,584 + Echvi_0928 0.75 +0.9 1,067,694 + Echvi_0928 0.80 -0.6 1,067,694 + Echvi_0928 0.80 +1.8 1,067,703 + Echvi_0928 0.81 -0.5 1,067,745 + Echvi_0928 0.83 +0.1 1,067,745 + Echvi_0928 0.83 -0.3 1,067,746 - Echvi_0928 0.83 -1.8 1,067,746 - Echvi_0928 0.83 +0.7 1,067,831 + Echvi_0928 0.87 -0.6 1,067,866 + Echvi_0928 0.89 -1.8 1,067,866 + Echvi_0928 0.89 +1.1 1,067,867 - Echvi_0928 0.89 -0.6 1,067,867 - Echvi_0928 0.89 -0.3 1,067,877 + Echvi_0928 0.90 +1.3 1,067,878 - Echvi_0928 0.90 +0.1 1,067,949 - -1.1 1,067,963 - -0.8 1,068,107 - +0.2 1,068,153 + +1.3 1,068,154 - +0.1 1,068,193 - Echvi_0929 0.12 -0.9 1,068,243 - Echvi_0929 0.17 -1.1 1,068,243 - Echvi_0929 0.17 -0.1 1,068,255 - Echvi_0929 0.18 +1.2 1,068,255 - Echvi_0929 0.18 -0.4 1,068,268 - Echvi_0929 0.20 +0.6 1,068,288 + Echvi_0929 0.22 +0.5 1,068,326 + Echvi_0929 0.26 +0.1 1,068,393 + Echvi_0929 0.33 +0.6 1,068,393 + Echvi_0929 0.33 -0.4 1,068,393 + Echvi_0929 0.33 -0.3 1,068,393 + Echvi_0929 0.33 -0.9 1,068,393 + Echvi_0929 0.33 -0.0 1,068,394 - Echvi_0929 0.33 +1.2 1,068,404 - Echvi_0929 0.34 +1.4 1,068,490 - Echvi_0929 0.43 +0.2 1,068,518 + Echvi_0929 0.46 -1.5 1,068,518 + Echvi_0929 0.46 +0.4 1,068,518 + Echvi_0929 0.46 -1.3 1,068,521 + Echvi_0929 0.46 -1.1 1,068,521 + Echvi_0929 0.46 -1.5 1,068,620 + Echvi_0929 0.57 -1.0 1,068,620 + Echvi_0929 0.57 -1.0 1,068,650 - Echvi_0929 0.60 +1.4 1,068,669 + Echvi_0929 0.62 -1.3 1,068,670 - Echvi_0929 0.62 -0.8 1,068,679 - Echvi_0929 0.63 -1.6 1,068,761 - Echvi_0929 0.72 -1.5 1,068,884 + Echvi_0929 0.85 -2.1 1,068,894 - Echvi_0929 0.86 +1.8 1,068,894 - Echvi_0929 0.86 -2.0 1,068,894 - Echvi_0929 0.86 -0.1 1,068,936 - -0.9 1,068,939 - +0.9 1,068,986 - -0.1 1,069,017 + -0.4 1,069,030 + +1.7 1,069,030 + +0.9 1,069,076 + -0.9 1,069,076 + +0.2 1,069,076 + -0.8
Or see this region's nucleotide sequence