Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0842 and Echvi_0843 are separated by 34 nucleotides Echvi_0843 and Echvi_0844 are separated by 596 nucleotides Echvi_0844 and Echvi_0845 are separated by 35 nucleotides
Echvi_0842: Echvi_0842 - Membrane proteins related to metalloendopeptidases, at 962,589 to 963,887
_0842
Echvi_0843: Echvi_0843 - hypothetical protein, at 963,922 to 964,029
_0843
Echvi_0844: Echvi_0844 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 964,626 to 966,128
_0844
Echvi_0845: Echvi_0845 - hypothetical protein, at 966,164 to 966,709
_0845
Position (kb)
964
965
966
967 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 963.860 kb on + strand at 963.861 kb on - strand at 963.885 kb on + strand at 963.885 kb on + strand at 963.885 kb on + strand at 963.886 kb on - strand at 964.121 kb on + strand at 964.121 kb on + strand at 964.121 kb on + strand at 964.121 kb on + strand at 964.122 kb on - strand at 964.122 kb on - strand at 964.124 kb on + strand at 964.125 kb on - strand at 964.132 kb on + strand at 964.133 kb on - strand at 964.143 kb on + strand at 964.158 kb on + strand at 964.190 kb on - strand at 964.190 kb on - strand at 964.264 kb on + strand at 964.264 kb on + strand at 964.264 kb on + strand at 964.264 kb on + strand at 964.287 kb on - strand at 964.328 kb on + strand at 964.362 kb on + strand at 964.362 kb on + strand at 964.432 kb on + strand at 964.469 kb on - strand at 964.472 kb on + strand at 964.472 kb on + strand at 964.475 kb on + strand at 964.479 kb on + strand at 964.482 kb on + strand at 964.500 kb on + strand at 964.580 kb on + strand at 964.581 kb on - strand at 964.595 kb on + strand at 966.130 kb on - strand at 966.159 kb on + strand at 966.159 kb on + strand at 966.159 kb on + strand at 966.228 kb on + strand, within Echvi_0845 at 966.229 kb on - strand, within Echvi_0845 at 966.233 kb on - strand, within Echvi_0845 at 966.236 kb on + strand, within Echvi_0845 at 966.394 kb on + strand, within Echvi_0845 at 966.394 kb on + strand, within Echvi_0845 at 966.395 kb on - strand, within Echvi_0845 at 966.400 kb on + strand, within Echvi_0845 at 966.456 kb on - strand, within Echvi_0845 at 966.501 kb on + strand, within Echvi_0845 at 966.501 kb on + strand, within Echvi_0845 at 966.502 kb on - strand, within Echvi_0845 at 966.507 kb on - strand, within Echvi_0845 at 966.532 kb on - strand, within Echvi_0845 at 966.572 kb on + strand, within Echvi_0845 at 966.632 kb on + strand, within Echvi_0845 at 966.667 kb on - strand at 966.688 kb on - strand at 966.707 kb on + strand at 966.734 kb on + strand at 966.751 kb on + strand at 966.752 kb on - strand at 966.752 kb on - strand at 966.752 kb on - strand at 966.752 kb on - strand at 966.762 kb on + strand at 966.763 kb on - strand at 966.768 kb on - strand at 966.779 kb on + strand at 966.806 kb on + strand at 966.814 kb on + strand at 966.850 kb on + strand at 966.863 kb on - strand at 966.866 kb on + strand at 966.886 kb on + strand at 966.886 kb on + strand at 966.887 kb on - strand at 966.887 kb on - strand at 966.925 kb on + strand at 966.925 kb on + strand at 966.931 kb on + strand at 966.931 kb on + strand at 966.935 kb on + strand at 966.936 kb on - strand at 966.936 kb on - strand at 966.936 kb on - strand at 966.948 kb on - strand at 967.011 kb on + strand at 967.012 kb on - strand at 967.012 kb on - strand at 967.012 kb on - strand at 967.016 kb on - strand at 967.070 kb on + strand at 967.070 kb on + strand at 967.070 kb on + strand at 967.071 kb on - strand at 967.108 kb on - strand at 967.125 kb on - strand at 967.125 kb on - strand at 967.125 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 963,860 + -0.3 963,861 - +1.2 963,885 + -3.1 963,885 + -0.3 963,885 + +0.1 963,886 - +0.2 964,121 + -1.4 964,121 + -1.3 964,121 + +0.2 964,121 + -0.4 964,122 - -0.3 964,122 - +0.2 964,124 + +0.1 964,125 - +0.9 964,132 + +0.2 964,133 - -1.3 964,143 + -0.5 964,158 + +0.5 964,190 - +0.2 964,190 - -0.0 964,264 + -0.6 964,264 + +0.2 964,264 + +0.3 964,264 + +0.6 964,287 - +0.2 964,328 + +1.1 964,362 + +1.0 964,362 + +1.2 964,432 + +0.7 964,469 - -1.3 964,472 + +1.6 964,472 + -1.4 964,475 + +0.7 964,479 + -0.6 964,482 + +0.8 964,500 + +0.9 964,580 + -0.2 964,581 - -2.0 964,595 + -0.3 966,130 - -0.8 966,159 + +1.0 966,159 + +0.4 966,159 + -0.5 966,228 + Echvi_0845 0.12 +0.9 966,229 - Echvi_0845 0.12 +0.7 966,233 - Echvi_0845 0.13 +0.1 966,236 + Echvi_0845 0.13 +0.1 966,394 + Echvi_0845 0.42 +1.8 966,394 + Echvi_0845 0.42 +0.9 966,395 - Echvi_0845 0.42 +1.0 966,400 + Echvi_0845 0.43 +0.3 966,456 - Echvi_0845 0.53 +0.1 966,501 + Echvi_0845 0.62 +0.4 966,501 + Echvi_0845 0.62 +0.5 966,502 - Echvi_0845 0.62 +0.0 966,507 - Echvi_0845 0.63 +0.9 966,532 - Echvi_0845 0.67 +2.8 966,572 + Echvi_0845 0.75 +0.9 966,632 + Echvi_0845 0.86 -1.6 966,667 - +1.7 966,688 - +2.2 966,707 + -0.2 966,734 + +1.4 966,751 + -1.6 966,752 - -1.9 966,752 - +0.1 966,752 - -1.6 966,752 - +0.5 966,762 + +0.8 966,763 - +0.0 966,768 - +0.4 966,779 + -0.5 966,806 + +0.6 966,814 + -0.6 966,850 + +0.2 966,863 - +0.6 966,866 + -0.1 966,886 + -0.1 966,886 + +0.6 966,887 - +0.5 966,887 - -0.6 966,925 + -0.1 966,925 + -0.1 966,931 + +0.3 966,931 + -0.3 966,935 + -0.8 966,936 - +1.0 966,936 - +1.0 966,936 - +0.4 966,948 - -0.1 967,011 + -0.8 967,012 - +0.2 967,012 - -1.4 967,012 - -0.3 967,016 - +0.5 967,070 + -1.3 967,070 + -0.3 967,070 + +0.4 967,071 - +2.0 967,108 - +1.5 967,125 - -1.3 967,125 - +0.4 967,125 - +0.2
Or see this region's nucleotide sequence